RNA–Protein interactions for RNA: ENST00000217315.9

TM9SF4-201, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2 BASIC

Gene TM9SF4, Length 4,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-201ENST00000217315 PIP4K2BP78356 416 aa14.37□□□□□ -0.11
TM9SF4-201ENST00000217315 PTPN12Q05209 780 aaKnown RBP14.37□□□□□ -0.11
TM9SF4-201ENST00000217315 TTC6Q86TZ1 520 aa14.37□□□□□ -0.11
TM9SF4-201ENST00000217315 NRKQ7Z2Y5 1582 aa14.37□□□□□ -0.11
TM9SF4-201ENST00000217315 MARCKSP29966 332 aaPredicted RBP14.37□□□□□ -0.11
TM9SF4-201ENST00000217315 CFAP100Q494V2 611 aa14.37□□□□□ -0.11
TM9SF4-201ENST00000217315 ALG1Q9BT22 464 aa14.37□□□□□ -0.11
TM9SF4-201ENST00000217315 SLC26A6Q9BXS9 759 aa14.37□□□□□ -0.11
TM9SF4-201ENST00000217315 TMX4Q9H1E5 349 aaPredicted RBP14.37□□□□□ -0.11
TM9SF4-201ENST00000217315 TRMT1Q9NXH9 659 aaKnown RBP14.37□□□□□ -0.11
TM9SF4-201ENST00000217315 LIG1P18858 919 aa14.37□□□□□ -0.11
TM9SF4-201ENST00000217315 NECTIN1Q15223 517 aa14.37□□□□□ -0.11
TM9SF4-201ENST00000217315 TTLL5Q6EMB2 1281 aa14.37□□□□□ -0.11
TM9SF4-201ENST00000217315 C17orf53Q8N3J3 647 aaPredicted RBP14.37□□□□□ -0.11
TM9SF4-201ENST00000217315 CEP170BQ9Y4F5 1589 aaPredicted RBP14.37□□□□□ -0.11
TM9SF4-201ENST00000217315 KIF20BQ96Q89 1820 aa14.36□□□□□ -0.11
TM9SF4-201ENST00000217315 RANBP6O60518 1105 aaKnown RBP14.36□□□□□ -0.11
TM9SF4-201ENST00000217315 ITGA6P23229 1130 aa14.36□□□□□ -0.11
TM9SF4-201ENST00000217315 DDIT3P35638 169 aa14.36□□□□□ -0.11
TM9SF4-201ENST00000217315 HAUS7Q99871 368 aa14.36□□□□□ -0.11
TM9SF4-201ENST00000217315 FAM177A1Q8N128 213 aaPredicted RBP14.36□□□□□ -0.11
TM9SF4-201ENST00000217315 PUS3Q9BZE2 481 aaKnown RBP14.36□□□□□ -0.11
TM9SF4-201ENST00000217315 ZBTB43O43298 467 aa14.36□□□□□ -0.11
TM9SF4-201ENST00000217315 UQCRFS1P1P0C7P4 283 aa14.36□□□□□ -0.11
TM9SF4-201ENST00000217315 ZAP70P43403 619 aa14.36□□□□□ -0.11
TM9SF4-201ENST00000217315 ANKRD20A12PQ8NF67 263 aa14.36□□□□□ -0.11
TM9SF4-201ENST00000217315 MRPS27Q92552 414 aaKnown RBP14.36□□□□□ -0.11
TM9SF4-201ENST00000217315 WASF1Q92558 559 aa14.36□□□□□ -0.11
TM9SF4-201ENST00000217315 CYP2E1P05181 493 aaPredicted RBP14.35□□□□□ -0.11
TM9SF4-201ENST00000217315 CLEC17AQ6ZS10 378 aa14.35□□□□□ -0.11
TM9SF4-201ENST00000217315 MFSD6Q6ZSS7 791 aa14.35□□□□□ -0.11
TM9SF4-201ENST00000217315 MNS1Q8NEH6 495 aa14.35□□□□□ -0.11
TM9SF4-201ENST00000217315 GTF3C6Q969F1 213 aa14.35□□□□□ -0.11
TM9SF4-201ENST00000217315 ZNF652Q9Y2D9 606 aa14.35□□□□□ -0.11
TM9SF4-201ENST00000217315 CYP21A2P08686 494 aa14.35□□□□□ -0.11
TM9SF4-201ENST00000217315 PTGS1P23219 599 aa14.35□□□□□ -0.11
TM9SF4-201ENST00000217315 TSR1Q2NL82 804 aaKnown RBP14.35□□□□□ -0.11
TM9SF4-201ENST00000217315 SLAIN2Q9P270 581 aa14.35□□□□□ -0.11
TM9SF4-201ENST00000217315 SSRP1Q08945 709 aaKnown RBP14.35□□□□□ -0.11
TM9SF4-201ENST00000217315 CAVIN4Q5BKX8 364 aa14.35□□□□□ -0.11
TM9SF4-201ENST00000217315 SMTNL1A8MU46 457 aa14.34□□□□□ -0.11
TM9SF4-201ENST00000217315 GPAA1O43292 621 aa14.34□□□□□ -0.11
TM9SF4-201ENST00000217315 TNNT1P13805 278 aa14.34□□□□□ -0.11
TM9SF4-201ENST00000217315 SFPQP23246 707 aaKnown RBP eCLIP14.34□□□□□ -0.11
TM9SF4-201ENST00000217315 TCIRG1Q13488 830 aa14.34□□□□□ -0.11
TM9SF4-201ENST00000217315 E7EWF7 191 aa14.34□□□□□ -0.11
TM9SF4-201ENST00000217315 CCDC196A0A1B0GTZ2 297 aa14.34□□□□□ -0.11
TM9SF4-201ENST00000217315 A0A1B0GVL5 298 aa14.34□□□□□ -0.11
TM9SF4-201ENST00000217315 ERVV-2B6SEH9 535 aa14.34□□□□□ -0.11
TM9SF4-201ENST00000217315 CAVIN2O95810 425 aa14.34□□□□□ -0.11
TM9SF4-201ENST00000217315 ATP6V1AP38606 617 aa14.34□□□□□ -0.11
TM9SF4-201ENST00000217315 CNNM3Q8NE01 707 aa14.34□□□□□ -0.11
TM9SF4-201ENST00000217315 APPBP2Q92624 585 aa14.34□□□□□ -0.11
TM9SF4-201ENST00000217315 ERBB4Q15303 1308 aa14.34□□□□□ -0.11
TM9SF4-201ENST00000217315 KCNG4Q8TDN1 519 aa14.33□□□□□ -0.11
TM9SF4-201ENST00000217315 ADGRL3Q9HAR2 1447 aa14.33□□□□□ -0.11
TM9SF4-201ENST00000217315 SPTLC2O15270 562 aa14.33□□□□□ -0.12
TM9SF4-201ENST00000217315 HSPD1P10809 573 aaKnown RBP14.33□□□□□ -0.12
TM9SF4-201ENST00000217315 PTPN14Q15678 1187 aa14.33□□□□□ -0.12
TM9SF4-201ENST00000217315 NIP7Q9Y221 180 aaKnown RBP eCLIP14.33□□□□□ -0.12
TM9SF4-201ENST00000217315 SLFNL1Q499Z3 407 aa14.33□□□□□ -0.12
TM9SF4-201ENST00000217315 AOPEPQ8N6M6 819 aa14.33□□□□□ -0.12
TM9SF4-201ENST00000217315 MIGA1Q8NAN2 632 aa14.33□□□□□ -0.12
TM9SF4-201ENST00000217315 PCMTD1Q96MG8 357 aaPredicted RBP14.33□□□□□ -0.12
TM9SF4-201ENST00000217315 B4E1Z4 1266 aa14.32□□□□□ -0.12
TM9SF4-201ENST00000217315 MAGEB6Q8N7X4 407 aa14.32□□□□□ -0.12
TM9SF4-201ENST00000217315 TTC14Q96N46 770 aa14.32□□□□□ -0.12
TM9SF4-201ENST00000217315 SLC4A4Q9Y6R1 1079 aa14.32□□□□□ -0.12
TM9SF4-201ENST00000217315 DIP2AQ14689 1571 aa14.32□□□□□ -0.12
TM9SF4-201ENST00000217315 SYKP43405 635 aa14.32□□□□□ -0.12
TM9SF4-201ENST00000217315 KLHL10Q6JEL2 608 aa14.32□□□□□ -0.12
TM9SF4-201ENST00000217315 ERCC4Q92889 916 aaPredicted RBP14.32□□□□□ -0.12
TM9SF4-201ENST00000217315 LLPHQ9BRT6 129 aaKnown RBP14.32□□□□□ -0.12
TM9SF4-201ENST00000217315 RNF41Q9H4P4 317 aaPredicted RBP14.32□□□□□ -0.12
TM9SF4-201ENST00000217315 ASAP1Q9ULH1 1129 aa14.32□□□□□ -0.12
TM9SF4-201ENST00000217315 NCOA3Q9Y6Q9 1424 aa14.32□□□□□ -0.12
TM9SF4-201ENST00000217315 CCDC152Q4G0S7 254 aa14.31□□□□□ -0.12
TM9SF4-201ENST00000217315 DSCC1Q9BVC3 393 aa14.31□□□□□ -0.12
TM9SF4-201ENST00000217315 CYP7A1P22680 504 aa14.31□□□□□ -0.12
TM9SF4-201ENST00000217315 SLC4A8Q2Y0W8 1093 aa14.31□□□□□ -0.12
TM9SF4-201ENST00000217315 TMC6Q7Z403 805 aa14.31□□□□□ -0.12
TM9SF4-201ENST00000217315 IQCA1Q86XH1 822 aa14.31□□□□□ -0.12
TM9SF4-201ENST00000217315 CDC5LQ99459 802 aaKnown RBP14.31□□□□□ -0.12
TM9SF4-201ENST00000217315 CBX8Q9HC52 389 aa14.31□□□□□ -0.12
TM9SF4-201ENST00000217315 NR1I2O75469 434 aa14.31□□□□□ -0.12
TM9SF4-201ENST00000217315 ADORA1P30542 326 aa14.31□□□□□ -0.12
TM9SF4-201ENST00000217315 ITSN1Q15811 1721 aa14.31□□□□□ -0.12
TM9SF4-201ENST00000217315 WTAPQ15007 396 aa14.31□□□□□ -0.12
TM9SF4-201ENST00000217315 HSP90AA4PQ58FG1 418 aa14.31□□□□□ -0.12
TM9SF4-201ENST00000217315 PDCL3Q9H2J4 239 aa14.31□□□□□ -0.12
TM9SF4-201ENST00000217315 CLSTN2Q9H4D0 955 aa14.31□□□□□ -0.12
TM9SF4-201ENST00000217315 DDB1Q16531 1140 aa14.3□□□□□ -0.12
TM9SF4-201ENST00000217315 ZKSCAN3Q9BRR0 538 aa14.3□□□□□ -0.12
TM9SF4-201ENST00000217315 CEMIPQ8WUJ3 1361 aa14.3□□□□□ -0.12
TM9SF4-201ENST00000217315 DYNC1I1O14576 645 aa14.3□□□□□ -0.12
TM9SF4-201ENST00000217315 CBFA2T2O43439 604 aa14.3□□□□□ -0.12
TM9SF4-201ENST00000217315 MBD4O95243 580 aa14.3□□□□□ -0.12
TM9SF4-201ENST00000217315 SCRN1Q12765 414 aa14.3□□□□□ -0.12
TM9SF4-201ENST00000217315 PDCL2Q8N4E4 241 aa14.3□□□□□ -0.12
TM9SF4-201ENST00000217315 CCDC47Q96A33 483 aaKnown RBP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms