RNA–Protein interactions for RNA: ENST00000216099.12

APOBEC3D-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

APPRIS P1 TSL 2 BASIC

Gene APOBEC3D, Length 2,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-201ENST00000216099 PALD1Q9ULE6 856 aa12.72□□□□□ -0.37
APOBEC3D-201ENST00000216099 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.72□□□□□ -0.37
APOBEC3D-201ENST00000216099 GRXCR2A6NFK2 248 aa12.71□□□□□ -0.37
APOBEC3D-201ENST00000216099 MAFGO15525 162 aa12.71□□□□□ -0.37
APOBEC3D-201ENST00000216099 SERPINB4P48594 390 aa12.71□□□□□ -0.37
APOBEC3D-201ENST00000216099 TCIRG1Q13488 830 aa12.71□□□□□ -0.37
APOBEC3D-201ENST00000216099 KIAA1211Q6ZU35 1233 aa12.71□□□□□ -0.37
APOBEC3D-201ENST00000216099 TNPO1Q92973 898 aaKnown RBP12.71□□□□□ -0.37
APOBEC3D-201ENST00000216099 LAMB2P55268 1798 aa12.71□□□□□ -0.37
APOBEC3D-201ENST00000216099 COL5A3P25940 1745 aaPredicted RBP12.71□□□□□ -0.37
APOBEC3D-201ENST00000216099 SPATA31A1Q5TZJ5 1347 aa12.71□□□□□ -0.37
APOBEC3D-201ENST00000216099 ATP5JP18859 108 aa12.71□□□□□ -0.37
APOBEC3D-201ENST00000216099 NUCB2P80303 420 aa12.71□□□□□ -0.37
APOBEC3D-201ENST00000216099 TNNI3KQ59H18 835 aa12.71□□□□□ -0.37
APOBEC3D-201ENST00000216099 LMBR1LQ6UX01 489 aa12.71□□□□□ -0.37
APOBEC3D-201ENST00000216099 KIF6Q6ZMV9 814 aa12.71□□□□□ -0.37
APOBEC3D-201ENST00000216099 DNAJC10Q8IXB1 793 aa12.71□□□□□ -0.37
APOBEC3D-201ENST00000216099 PIF1Q9H611 641 aa12.71□□□□□ -0.37
APOBEC3D-201ENST00000216099 FPGT-TNNI3KV9GXZ4 949 aa12.71□□□□□ -0.37
APOBEC3D-201ENST00000216099 SLIT2O94813 1529 aa12.71□□□□□ -0.38
APOBEC3D-201ENST00000216099 MYH7P12883 1935 aa12.71□□□□□ -0.38
APOBEC3D-201ENST00000216099 C7P10643 843 aa12.7□□□□□ -0.38
APOBEC3D-201ENST00000216099 NEK4P51957 841 aa12.7□□□□□ -0.38
APOBEC3D-201ENST00000216099 GPATCH11Q8N954 259 aa12.7□□□□□ -0.38
APOBEC3D-201ENST00000216099 KLHDC4Q8TBB5 520 aa12.7□□□□□ -0.38
APOBEC3D-201ENST00000216099 KCNB2Q92953 911 aa12.7□□□□□ -0.38
APOBEC3D-201ENST00000216099 CCDC8Q9H0W5 538 aaPredicted RBP12.7□□□□□ -0.38
APOBEC3D-201ENST00000216099 ZBTB3Q9H5J0 574 aa12.7□□□□□ -0.38
APOBEC3D-201ENST00000216099 GNEQ9Y223 722 aaKnown RBP12.7□□□□□ -0.38
APOBEC3D-201ENST00000216099 CIAO1O76071 339 aa12.7□□□□□ -0.38
APOBEC3D-201ENST00000216099 CUL4AQ13619 759 aa12.7□□□□□ -0.38
APOBEC3D-201ENST00000216099 JARID2Q92833 1246 aaPredicted RBP12.7□□□□□ -0.38
APOBEC3D-201ENST00000216099 PMM1Q92871 262 aa12.7□□□□□ -0.38
APOBEC3D-201ENST00000216099 PLA2G12BQ9BX93 195 aa12.7□□□□□ -0.38
APOBEC3D-201ENST00000216099 PPP1R12CQ9BZL4 782 aa12.7□□□□□ -0.38
APOBEC3D-201ENST00000216099 TLR7Q9NYK1 1049 aaKnown RBP12.7□□□□□ -0.38
APOBEC3D-201ENST00000216099 JCADQ9P266 1359 aa12.7□□□□□ -0.38
APOBEC3D-201ENST00000216099 MAP3K15Q6ZN16 1313 aa12.7□□□□□ -0.38
APOBEC3D-201ENST00000216099 PAX3P23760 479 aa12.69□□□□□ -0.38
APOBEC3D-201ENST00000216099 TFCP2Q12800 502 aa12.69□□□□□ -0.38
APOBEC3D-201ENST00000216099 CWC27Q6UX04 472 aaKnown RBP12.69□□□□□ -0.38
APOBEC3D-201ENST00000216099 PALM3A6NDB9 673 aaPredicted RBP12.69□□□□□ -0.38
APOBEC3D-201ENST00000216099 GNPATO15228 680 aa12.69□□□□□ -0.38
APOBEC3D-201ENST00000216099 PCCAP05165 728 aaPredicted RBP12.69□□□□□ -0.38
APOBEC3D-201ENST00000216099 CYP2E1P05181 493 aaPredicted RBP12.69□□□□□ -0.38
APOBEC3D-201ENST00000216099 CYP19A1P11511 503 aaPredicted RBP12.69□□□□□ -0.38
APOBEC3D-201ENST00000216099 PDE6BP35913 854 aa12.69□□□□□ -0.38
APOBEC3D-201ENST00000216099 SPACA7Q96KW9 195 aa12.69□□□□□ -0.38
APOBEC3D-201ENST00000216099 BEGAINQ9BUH8 593 aa12.69□□□□□ -0.38
APOBEC3D-201ENST00000216099 BCORQ6W2J9 1755 aa12.69□□□□□ -0.38
APOBEC3D-201ENST00000216099 ZNF609O15014 1411 aa12.69□□□□□ -0.38
APOBEC3D-201ENST00000216099 IL15P40933 162 aaPredicted RBP12.68□□□□□ -0.38
APOBEC3D-201ENST00000216099 HSP90AB3PQ58FF7 597 aa12.68□□□□□ -0.38
APOBEC3D-201ENST00000216099 INTS4Q96HW7 963 aaKnown RBP12.68□□□□□ -0.38
APOBEC3D-201ENST00000216099 DBNLQ9UJU6 430 aaKnown RBP12.68□□□□□ -0.38
APOBEC3D-201ENST00000216099 SNX14Q9Y5W7 946 aa12.68□□□□□ -0.38
APOBEC3D-201ENST00000216099 MED23Q9ULK4 1368 aa12.68□□□□□ -0.38
APOBEC3D-201ENST00000216099 ARAP2Q8WZ64 1704 aa12.68□□□□□ -0.38
APOBEC3D-201ENST00000216099 CDHR2Q9BYE9 1310 aa12.68□□□□□ -0.38
APOBEC3D-201ENST00000216099 ATG9AQ7Z3C6 839 aa12.68□□□□□ -0.38
APOBEC3D-201ENST00000216099 TMX3Q96JJ7 454 aa12.68□□□□□ -0.38
APOBEC3D-201ENST00000216099 UCN2Q96RP3 112 aa12.68□□□□□ -0.38
APOBEC3D-201ENST00000216099 IQSEC3Q9UPP2 1182 aaPredicted RBP12.68□□□□□ -0.38
APOBEC3D-201ENST00000216099 SPATA31A5Q5VU36 1347 aa12.68□□□□□ -0.38
APOBEC3D-201ENST00000216099 SPATA31A7Q8IWB4 1347 aa12.68□□□□□ -0.38
APOBEC3D-201ENST00000216099 ANKRD33BA6NCL7 494 aa12.67□□□□□ -0.38
APOBEC3D-201ENST00000216099 PPFIA4O75335 1185 aa12.67□□□□□ -0.38
APOBEC3D-201ENST00000216099 FOXD4Q12950 439 aaPredicted RBP12.67□□□□□ -0.38
APOBEC3D-201ENST00000216099 CCDC171Q6TFL3 1326 aa12.67□□□□□ -0.38
APOBEC3D-201ENST00000216099 TM6SF1Q9BZW5 370 aa12.67□□□□□ -0.38
APOBEC3D-201ENST00000216099 LRP5O75197 1615 aa12.67□□□□□ -0.38
APOBEC3D-201ENST00000216099 EYA2O00167 538 aa12.66□□□□□ -0.38
APOBEC3D-201ENST00000216099 MNX1P50219 401 aaPredicted RBP12.66□□□□□ -0.38
APOBEC3D-201ENST00000216099 NPAS4Q8IUM7 802 aa12.66□□□□□ -0.38
APOBEC3D-201ENST00000216099 STK32AQ8WU08 396 aa12.66□□□□□ -0.38
APOBEC3D-201ENST00000216099 SLC4A9Q96Q91 983 aa12.66□□□□□ -0.38
APOBEC3D-201ENST00000216099 BOLA2Q9H3K6 86 aa12.66□□□□□ -0.38
APOBEC3D-201ENST00000216099 LAMA4Q16363 1823 aa12.66□□□□□ -0.38
APOBEC3D-201ENST00000216099 SSFA2P28290 1259 aa12.66□□□□□ -0.38
APOBEC3D-201ENST00000216099 NMIQ13287 307 aaPredicted RBP12.66□□□□□ -0.38
APOBEC3D-201ENST00000216099 MYSM1Q5VVJ2 828 aa12.66□□□□□ -0.38
APOBEC3D-201ENST00000216099 EFCAB3Q8N7B9 438 aa12.66□□□□□ -0.38
APOBEC3D-201ENST00000216099 ZBTB38Q8NAP3 1195 aaPredicted RBP12.66□□□□□ -0.38
APOBEC3D-201ENST00000216099 TTC14Q96N46 770 aa12.66□□□□□ -0.38
APOBEC3D-201ENST00000216099 HAUS7Q99871 368 aa12.66□□□□□ -0.38
APOBEC3D-201ENST00000216099 FSD1Q9BTV5 496 aa12.66□□□□□ -0.38
APOBEC3D-201ENST00000216099 MYH14Q7Z406 1995 aaKnown RBP12.66□□□□□ -0.38
APOBEC3D-201ENST00000216099 PALLDQ8WX93 1383 aa12.66□□□□□ -0.38
APOBEC3D-201ENST00000216099 ERVV-1B6SEH8 477 aa12.65□□□□□ -0.38
APOBEC3D-201ENST00000216099 IL6STP40189 918 aaPredicted RBP12.65□□□□□ -0.38
APOBEC3D-201ENST00000216099 MDM2Q00987 491 aaPredicted RBP12.65□□□□□ -0.38
APOBEC3D-201ENST00000216099 SKOR2Q2VWA4 1001 aaPredicted RBP12.65□□□□□ -0.38
APOBEC3D-201ENST00000216099 DDX60Q8IY21 1712 aaKnown RBP12.65□□□□□ -0.38
APOBEC3D-201ENST00000216099 CASZ1Q86V15 1759 aa12.65□□□□□ -0.38
APOBEC3D-201ENST00000216099 TOM1O60784 492 aa12.65□□□□□ -0.38
APOBEC3D-201ENST00000216099 CSF1RP07333 972 aa12.65□□□□□ -0.38
APOBEC3D-201ENST00000216099 DDB1Q16531 1140 aa12.65□□□□□ -0.38
APOBEC3D-201ENST00000216099 MAP4K1Q92918 833 aa12.65□□□□□ -0.38
APOBEC3D-201ENST00000216099 KCNG1Q9UIX4 513 aa12.65□□□□□ -0.38
APOBEC3D-201ENST00000216099 CHMP3Q9Y3E7 222 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms