RNA–Protein interactions for RNA: ENST00000040877.1

TARBP1-201, Transcript of TAR (HIV-1) RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARBP1, Length 5,130 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARBP1-201ENST00000040877 SLC4A8Q2Y0W8 1093 aa26.47■■□□□ 1.83
TARBP1-201ENST00000040877 LRSAM1Q6UWE0 723 aa26.47■■□□□ 1.83
TARBP1-201ENST00000040877 C16orf71Q8IYS4 520 aaPredicted RBP26.47■■□□□ 1.83
TARBP1-201ENST00000040877 DENND2AQ9ULE3 1009 aa26.47■■□□□ 1.83
TARBP1-201ENST00000040877 ARHGEF10O15013 1369 aa26.47■■□□□ 1.83
TARBP1-201ENST00000040877 LDHBP07195 334 aaKnown RBP26.47■■□□□ 1.83
TARBP1-201ENST00000040877 TNNT1P13805 278 aa26.47■■□□□ 1.83
TARBP1-201ENST00000040877 HSPA2P54652 639 aa26.47■■□□□ 1.83
TARBP1-201ENST00000040877 TAOK3Q9H2K8 898 aa26.47■■□□□ 1.83
TARBP1-201ENST00000040877 METTL22Q9BUU2 404 aaPredicted RBP26.47■■□□□ 1.83
TARBP1-201ENST00000040877 BICC1Q9H694 974 aaKnown RBP26.47■■□□□ 1.83
TARBP1-201ENST00000040877 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP26.47■■□□□ 1.835e-6■■■□□ 18.1
TARBP1-201ENST00000040877 IFI16Q16666 785 aaKnown RBP26.47■■□□□ 1.83
TARBP1-201ENST00000040877 TAF3Q5VWG9 929 aa26.47■■□□□ 1.83
TARBP1-201ENST00000040877 CREB3L3Q68CJ9 461 aa26.47■■□□□ 1.83
TARBP1-201ENST00000040877 PLEKHM2Q8IWE5 1019 aa26.47■■□□□ 1.83
TARBP1-201ENST00000040877 INTS4Q96HW7 963 aaKnown RBP26.47■■□□□ 1.83
TARBP1-201ENST00000040877 RLBP1P12271 317 aa26.46■■□□□ 1.83
TARBP1-201ENST00000040877 TCEANC2Q96MN5 208 aa26.46■■□□□ 1.83
TARBP1-201ENST00000040877 IBSPP21815 317 aaPredicted RBP26.46■■□□□ 1.83
TARBP1-201ENST00000040877 MCM9Q9NXL9 1143 aa26.46■■□□□ 1.83
TARBP1-201ENST00000040877 NEO1Q92859 1461 aa26.46■■□□□ 1.83
TARBP1-201ENST00000040877 POLD1P28340 1107 aa26.46■■□□□ 1.83
TARBP1-201ENST00000040877 KRT24Q2M2I5 525 aa26.46■■□□□ 1.83
TARBP1-201ENST00000040877 NBPF14Q5TI25 921 aa26.45■■□□□ 1.83
TARBP1-201ENST00000040877 RRP36Q96EU6 259 aaKnown RBP26.45■■□□□ 1.83
TARBP1-201ENST00000040877 SH3TC1Q8TE82 1336 aa26.45■■□□□ 1.82
TARBP1-201ENST00000040877 F8W031 263 aaPredicted RBP26.45■■□□□ 1.82
TARBP1-201ENST00000040877 EYA2O00167 538 aa26.45■■□□□ 1.82
TARBP1-201ENST00000040877 PICALMQ13492 652 aa26.45■■□□□ 1.82
TARBP1-201ENST00000040877 MAGEB6Q8N7X4 407 aa26.45■■□□□ 1.82
TARBP1-201ENST00000040877 TRAPPC3LQ5T215 181 aa26.45■■□□□ 1.82
TARBP1-201ENST00000040877 SMARCC2Q8TAQ2 1214 aa26.45■■□□□ 1.82
TARBP1-201ENST00000040877 RRAGBQ5VZM2 374 aa26.45■■□□□ 1.82
TARBP1-201ENST00000040877 PSMA7O14818 248 aa26.44■■□□□ 1.82
TARBP1-201ENST00000040877 CHMLP26374 656 aa26.44■■□□□ 1.82
TARBP1-201ENST00000040877 ZSCAN23Q3MJ62 389 aa26.44■■□□□ 1.82
TARBP1-201ENST00000040877 RBM17Q96I25 401 aaKnown RBP26.44■■□□□ 1.82
TARBP1-201ENST00000040877 PRDM10Q9NQV6 1147 aa26.44■■□□□ 1.82
TARBP1-201ENST00000040877 PAXIP1Q6ZW49 1069 aaPredicted RBP26.44■■□□□ 1.82
TARBP1-201ENST00000040877 BRAPQ7Z569 592 aa26.44■■□□□ 1.82
TARBP1-201ENST00000040877 LIG1P18858 919 aa26.44■■□□□ 1.82
TARBP1-201ENST00000040877 AOX1Q06278 1338 aa26.44■■□□□ 1.82
TARBP1-201ENST00000040877 GNA11P29992 359 aa26.44■■□□□ 1.82
TARBP1-201ENST00000040877 TTC6Q86TZ1 520 aa26.44■■□□□ 1.82
TARBP1-201ENST00000040877 JDP2Q8WYK2 163 aa26.44■■□□□ 1.82
TARBP1-201ENST00000040877 INSRP06213 1382 aa26.43■■□□□ 1.82
TARBP1-201ENST00000040877 CHL1O00533 1208 aa26.43■■□□□ 1.82
TARBP1-201ENST00000040877 FERMT2Q96AC1 680 aa26.43■■□□□ 1.82
TARBP1-201ENST00000040877 ZBTB7BO15156 539 aaPredicted RBP26.43■■□□□ 1.82
TARBP1-201ENST00000040877 FAM200AQ8TCP9 573 aa26.43■■□□□ 1.82
TARBP1-201ENST00000040877 GSTTP1A0A1W2PQM5 241 aa26.43■■□□□ 1.82
TARBP1-201ENST00000040877 CCDC91Q7Z6B0 441 aa26.43■■□□□ 1.82
TARBP1-201ENST00000040877 HOOK3Q86VS8 718 aa26.42■■□□□ 1.82
TARBP1-201ENST00000040877 RBM28Q9NW13 759 aaKnown RBP26.42■■□□□ 1.82
TARBP1-201ENST00000040877 SPTLC2O15270 562 aa26.42■■□□□ 1.82
TARBP1-201ENST00000040877 ATL3Q6DD88 541 aa26.42■■□□□ 1.82
TARBP1-201ENST00000040877 PPFIA3O75145 1194 aa26.42■■□□□ 1.82
TARBP1-201ENST00000040877 NF2P35240 595 aa26.42■■□□□ 1.82
TARBP1-201ENST00000040877 USP8P40818 1118 aa26.42■■□□□ 1.82
TARBP1-201ENST00000040877 PBRM1Q86U86 1689 aa26.41■■□□□ 1.82
TARBP1-201ENST00000040877 CBX1P83916 185 aa26.41■■□□□ 1.82
TARBP1-201ENST00000040877 CERS3Q8IU89 383 aa26.41■■□□□ 1.82
TARBP1-201ENST00000040877 CNPY2Q9Y2B0 182 aa26.41■■□□□ 1.82
TARBP1-201ENST00000040877 ABCA5Q8WWZ7 1642 aa26.41■■□□□ 1.82
TARBP1-201ENST00000040877 ERICH4A6NGS2 130 aa26.41■■□□□ 1.82
TARBP1-201ENST00000040877 RUFY3Q7L099 469 aa26.41■■□□□ 1.82
TARBP1-201ENST00000040877 NAP1L4Q99733 375 aaKnown RBP26.41■■□□□ 1.82
TARBP1-201ENST00000040877 C8orf34Q49A92 452 aa26.41■■□□□ 1.82
TARBP1-201ENST00000040877 HELBQ8NG08 1087 aaPredicted RBP26.41■■□□□ 1.82
TARBP1-201ENST00000040877 SPDYE3A6NKU9 549 aa26.4■■□□□ 1.82
TARBP1-201ENST00000040877 GNPATO15228 680 aa26.4■■□□□ 1.82
TARBP1-201ENST00000040877 USP48Q86UV5 1035 aa26.4■■□□□ 1.82
TARBP1-201ENST00000040877 BICD1Q96G01 975 aa26.4■■□□□ 1.82
TARBP1-201ENST00000040877 PLEKHG3A1L390 1219 aa26.4■■□□□ 1.82
TARBP1-201ENST00000040877 HCLS1P14317 486 aaPredicted RBP26.4■■□□□ 1.82
TARBP1-201ENST00000040877 KRT2P35908 639 aa26.4■■□□□ 1.82
TARBP1-201ENST00000040877 UBASH3AP57075 661 aa26.4■■□□□ 1.82
TARBP1-201ENST00000040877 GIMAP6Q6P9H5 292 aa26.4■■□□□ 1.82
TARBP1-201ENST00000040877 AKR1B10O60218 316 aa26.4■■□□□ 1.82
TARBP1-201ENST00000040877 CTNNA2P26232 953 aa26.4■■□□□ 1.82
TARBP1-201ENST00000040877 AK2P54819 239 aa26.4■■□□□ 1.82
TARBP1-201ENST00000040877 SNW1Q13573 536 aaKnown RBP26.4■■□□□ 1.82
TARBP1-201ENST00000040877 CNBD1Q8NA66 436 aa26.4■■□□□ 1.82
TARBP1-201ENST00000040877 SLC52A2Q9HAB3 445 aa26.4■■□□□ 1.82
TARBP1-201ENST00000040877 KRT13P13646 458 aa26.39■■□□□ 1.82
TARBP1-201ENST00000040877 KRT79Q5XKE5 535 aa26.39■■□□□ 1.82
TARBP1-201ENST00000040877 TBC1D5Q92609 795 aa26.39■■□□□ 1.82
TARBP1-201ENST00000040877 SPAG5Q96R06 1193 aa26.39■■□□□ 1.82
TARBP1-201ENST00000040877 TRMT1Q9NXH9 659 aaKnown RBP26.39■■□□□ 1.82
TARBP1-201ENST00000040877 CGNQ9P2M7 1197 aaKnown RBP26.39■■□□□ 1.82
TARBP1-201ENST00000040877 TMCO5BA8MYB1 307 aa26.39■■□□□ 1.81
TARBP1-201ENST00000040877 GCOM1H8Y6P7 765 aaPredicted RBP26.39■■□□□ 1.81
TARBP1-201ENST00000040877 PDE8AO60658 829 aa26.39■■□□□ 1.81
TARBP1-201ENST00000040877 MYZAPP0CAP1 466 aa26.39■■□□□ 1.81
TARBP1-201ENST00000040877 CYLC1P35663 651 aaPredicted RBP26.39■■□□□ 1.81
TARBP1-201ENST00000040877 PUM3Q15397 648 aaKnown RBP26.39■■□□□ 1.81
TARBP1-201ENST00000040877 IFFO1Q0D2I5 559 aa26.39■■□□□ 1.81
TARBP1-201ENST00000040877 PLVAPQ9BX97 442 aa26.39■■□□□ 1.81
TARBP1-201ENST00000040877 CTNNBL1Q8WYA6 563 aaPredicted RBP26.38■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms