RNA–Protein interactions for RNA: ENST00000007390.2

TSR3-201, Transcript of TSR3, acp transferase ribosome maturation factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSR3, Length 1,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3-201ENST00000007390 KLRK1P26718 216 aa31.38■■■□□ 2.61
TSR3-201ENST00000007390 C15orf52Q6ZUT6 534 aaKnown RBP31.38■■■□□ 2.61
TSR3-201ENST00000007390 API5Q9BZZ5 524 aaKnown RBP31.38■■■□□ 2.61
TSR3-201ENST00000007390 IRS2Q9Y4H2 1338 aa31.38■■■□□ 2.61
TSR3-201ENST00000007390 EGFRP00533 1210 aa31.37■■■□□ 2.61
TSR3-201ENST00000007390 ZNF280AP59817 542 aaPredicted RBP31.37■■■□□ 2.61
TSR3-201ENST00000007390 TBC1D10BQ4KMP7 808 aaPredicted RBP31.37■■■□□ 2.61
TSR3-201ENST00000007390 ANKRD44Q8N8A2 993 aa31.37■■■□□ 2.61
TSR3-201ENST00000007390 KIF16BQ96L93 1317 aa31.36■■■□□ 2.61
TSR3-201ENST00000007390 TRAF5O00463 557 aa31.36■■■□□ 2.61
TSR3-201ENST00000007390 TAF5LO75529 589 aa31.36■■■□□ 2.61
TSR3-201ENST00000007390 HNRNPUQ00839 825 aaKnown RBP eCLIP31.36■■■□□ 2.61
TSR3-201ENST00000007390 HELBQ8NG08 1087 aaPredicted RBP31.36■■■□□ 2.61
TSR3-201ENST00000007390 CNNM1Q9NRU3 951 aa31.36■■■□□ 2.61
TSR3-201ENST00000007390 MKRN1Q9UHC7 482 aaKnown RBP31.36■■■□□ 2.61
TSR3-201ENST00000007390 FMR1Q06787 632 aaKnown RBP eCLIP31.35■■■□□ 2.61
TSR3-201ENST00000007390 DACT2Q5SW24 774 aa31.35■■■□□ 2.61
TSR3-201ENST00000007390 STRIP1Q5VSL9 837 aa31.35■■■□□ 2.61
TSR3-201ENST00000007390 GLIS2Q9BZE0 524 aaPredicted RBP31.35■■■□□ 2.61
TSR3-201ENST00000007390 KIF4BQ2VIQ3 1234 aa31.34■■■□□ 2.61
TSR3-201ENST00000007390 CDC37L1Q7L3B6 337 aa31.34■■■□□ 2.61
TSR3-201ENST00000007390 ZNF646O15015 1829 aaPredicted RBP31.33■■■□□ 2.61
TSR3-201ENST00000007390 SNAP23O00161 211 aa31.33■■■□□ 2.61
TSR3-201ENST00000007390 ARHGAP45Q92619 1136 aa31.33■■■□□ 2.61
TSR3-201ENST00000007390 MYO3BQ8WXR4 1341 aa31.32■■■□□ 2.6
TSR3-201ENST00000007390 RASSF10A6NK89 507 aa31.32■■■□□ 2.6
TSR3-201ENST00000007390 USP17L8P0C7I0 530 aa31.32■■■□□ 2.6
TSR3-201ENST00000007390 CST9Q5W186 159 aa31.32■■■□□ 2.6
TSR3-201ENST00000007390 TRPM7Q96QT4 1865 aa31.31■■■□□ 2.6
TSR3-201ENST00000007390 RBM26Q5T8P6 1007 aaKnown RBP31.31■■■□□ 2.6
TSR3-201ENST00000007390 CD209Q9NNX6 404 aa31.31■■■□□ 2.6
TSR3-201ENST00000007390 PUS3Q9BZE2 481 aaKnown RBP31.29■■■□□ 2.6
TSR3-201ENST00000007390 ABT1Q9ULW3 272 aaKnown RBP31.29■■■□□ 2.6
TSR3-201ENST00000007390 RIPOR2Q9Y4F9 1068 aa31.29■■■□□ 2.6
TSR3-201ENST00000007390 MROH5Q6ZUA9 1318 aa31.28■■■□□ 2.6
TSR3-201ENST00000007390 TTLL5Q6EMB2 1281 aa31.28■■■□□ 2.6
TSR3-201ENST00000007390 ZNF804AQ7Z570 1209 aa31.28■■■□□ 2.6
TSR3-201ENST00000007390 PLIN1O60240 522 aa31.27■■■□□ 2.6
TSR3-201ENST00000007390 MMP14P50281 582 aa31.27■■■□□ 2.6
TSR3-201ENST00000007390 UBE4AQ14139 1066 aa31.27■■■□□ 2.6
TSR3-201ENST00000007390 DEFB115Q30KQ5 88 aa31.27■■■□□ 2.6
TSR3-201ENST00000007390 DCPSQ96C86 337 aaKnown RBP31.27■■■□□ 2.6
TSR3-201ENST00000007390 MYOZ2Q9NPC6 264 aa31.27■■■□□ 2.6
TSR3-201ENST00000007390 UBTFL1P0CB47 393 aaPredicted RBP31.26■■■□□ 2.59
TSR3-201ENST00000007390 IL1R1P14778 569 aa31.26■■■□□ 2.59
TSR3-201ENST00000007390 VEGFBP49765 207 aa31.26■■■□□ 2.59
TSR3-201ENST00000007390 KRT26Q7Z3Y9 468 aa31.26■■■□□ 2.59
TSR3-201ENST00000007390 USP48Q86UV5 1035 aa31.26■■■□□ 2.59
TSR3-201ENST00000007390 FBXW7Q969H0 707 aa31.26■■■□□ 2.59
TSR3-201ENST00000007390 MXD3Q9BW11 206 aa31.26■■■□□ 2.59
TSR3-201ENST00000007390 CELF2O95319 508 aaKnown RBP31.25■■■□□ 2.59
TSR3-201ENST00000007390 GTF2IP78347 998 aa31.25■■■□□ 2.59
TSR3-201ENST00000007390 GGA3Q9NZ52 723 aa31.25■■■□□ 2.59
TSR3-201ENST00000007390 TLL2Q9Y6L7 1015 aa31.25■■■□□ 2.59
TSR3-201ENST00000007390 INTS3Q68E01 1043 aaKnown RBP31.24■■■□□ 2.59
TSR3-201ENST00000007390 OGFOD1Q8N543 542 aa31.24■■■□□ 2.59
TSR3-201ENST00000007390 ZBED9Q6R2W3 1325 aa31.24■■■□□ 2.59
TSR3-201ENST00000007390 IPO8O15397 1037 aaKnown RBP31.23■■■□□ 2.59
TSR3-201ENST00000007390 SCARF1Q14162 830 aa31.23■■■□□ 2.59
TSR3-201ENST00000007390 HDAC5Q9UQL6 1122 aa31.23■■■□□ 2.59
TSR3-201ENST00000007390 ASTN2O75129 1339 aaPredicted RBP31.23■■■□□ 2.59
TSR3-201ENST00000007390 LRRC24Q50LG9 513 aa31.22■■■□□ 2.59
TSR3-201ENST00000007390 BCAR3O75815 825 aa31.21■■■□□ 2.59
TSR3-201ENST00000007390 RFX5P48382 616 aaPredicted RBP31.21■■■□□ 2.59
TSR3-201ENST00000007390 PITPNM2Q9BZ72 1349 aa31.21■■■□□ 2.59
TSR3-201ENST00000007390 METTL24Q5JXM2 366 aa31.2■■■□□ 2.59
TSR3-201ENST00000007390 SAPCD2Q86UD0 394 aa31.2■■■□□ 2.59
TSR3-201ENST00000007390 SULF1Q8IWU6 871 aa31.2■■■□□ 2.59
TSR3-201ENST00000007390 VGLL2Q8N8G2 317 aa31.2■■■□□ 2.59
TSR3-201ENST00000007390 KLHDC4Q8TBB5 520 aa31.2■■■□□ 2.59
TSR3-201ENST00000007390 ADM5C9JUS6 153 aa31.19■■■□□ 2.58
TSR3-201ENST00000007390 HSPA1AP0DMV8 641 aaKnown RBP31.19■■■□□ 2.58
TSR3-201ENST00000007390 HSPA1BP0DMV9 641 aaKnown RBP31.19■■■□□ 2.58
TSR3-201ENST00000007390 TRIM27P14373 513 aa31.19■■■□□ 2.58
TSR3-201ENST00000007390 FKBP1AP62942 108 aaKnown RBP31.19■■■□□ 2.58
TSR3-201ENST00000007390 ANGEL2Q5VTE6 544 aaKnown RBP31.19■■■□□ 2.58
TSR3-201ENST00000007390 ATF7IPQ6VMQ6 1270 aa31.19■■■□□ 2.58
TSR3-201ENST00000007390 HHIPL1Q96JK4 782 aa31.19■■■□□ 2.58
TSR3-201ENST00000007390 ZNF408Q9H9D4 720 aa31.19■■■□□ 2.58
TSR3-201ENST00000007390 PDE8BO95263 885 aa31.18■■■□□ 2.58
TSR3-201ENST00000007390 MEIS3Q99687 375 aa31.18■■■□□ 2.58
TSR3-201ENST00000007390 WDR33Q9C0J8 1336 aaKnown RBP31.18■■■□□ 2.58
TSR3-201ENST00000007390 HIBADHP31937 336 aaKnown RBP31.17■■■□□ 2.58
TSR3-201ENST00000007390 PTPN12Q05209 780 aaKnown RBP31.17■■■□□ 2.58
TSR3-201ENST00000007390 DLK2Q6UY11 383 aa31.17■■■□□ 2.58
TSR3-201ENST00000007390 KIAA0825Q8IV33 1275 aa31.17■■■□□ 2.58
TSR3-201ENST00000007390 CERS5Q8N5B7 392 aa31.17■■■□□ 2.58
TSR3-201ENST00000007390 FAM84BQ96KN1 310 aaPredicted RBP31.17■■■□□ 2.58
TSR3-201ENST00000007390 HDAC9Q9UKV0 1011 aa31.17■■■□□ 2.58
TSR3-201ENST00000007390 LRRFIP2Q9Y608 721 aaKnown RBP31.17■■■□□ 2.58
TSR3-201ENST00000007390 POLR2AP24928 1970 aaKnown RBP31.17■■■□□ 2.58
TSR3-201ENST00000007390 EYA2O00167 538 aa31.16■■■□□ 2.58
TSR3-201ENST00000007390 SASH1O94885 1247 aa31.16■■■□□ 2.58
TSR3-201ENST00000007390 ECE1P42892 770 aa31.16■■■□□ 2.58
TSR3-201ENST00000007390 TDRD7Q8NHU6 1098 aaKnown RBP31.16■■■□□ 2.58
TSR3-201ENST00000007390 CAPNS2Q96L46 248 aa31.16■■■□□ 2.58
TSR3-201ENST00000007390 FAM205AQ6ZU69 1335 aa31.16■■■□□ 2.58
TSR3-201ENST00000007390 WNT10BO00744 389 aa31.15■■■□□ 2.58
TSR3-201ENST00000007390 GNAI3P08754 354 aa31.15■■■□□ 2.58
TSR3-201ENST00000007390 GYG1P46976 350 aa31.15■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms