RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 USP6P35125 1406 aa11.94□□□□□ -0.5
NIPAL3-201ENST00000003912 NLGN1Q8N2Q7 840 aa11.93□□□□□ -0.5
NIPAL3-201ENST00000003912 ZSCAN16Q9H4T2 348 aaPredicted RBP11.93□□□□□ -0.5
NIPAL3-201ENST00000003912 CCDC171Q6TFL3 1326 aa11.93□□□□□ -0.5
NIPAL3-201ENST00000003912 NAPAP54920 295 aa11.93□□□□□ -0.5
NIPAL3-201ENST00000003912 MPNDQ8N594 471 aa11.93□□□□□ -0.5
NIPAL3-201ENST00000003912 RRP36Q96EU6 259 aaKnown RBP11.93□□□□□ -0.5
NIPAL3-201ENST00000003912 GIGYF1O75420 1035 aaPredicted RBP11.93□□□□□ -0.5
NIPAL3-201ENST00000003912 KRT27Q7Z3Y8 459 aa11.93□□□□□ -0.5
NIPAL3-201ENST00000003912 C6orf50Q9HD87 102 aa11.93□□□□□ -0.5
NIPAL3-201ENST00000003912 LOC102724428A0A0B4J2F2 783 aa11.93□□□□□ -0.5
NIPAL3-201ENST00000003912 RLBP1P12271 317 aa11.93□□□□□ -0.5
NIPAL3-201ENST00000003912 SIK1P57059 783 aa11.93□□□□□ -0.5
NIPAL3-201ENST00000003912 PLS1Q14651 629 aa11.93□□□□□ -0.5
NIPAL3-201ENST00000003912 CAMK4Q16566 473 aa11.93□□□□□ -0.5
NIPAL3-201ENST00000003912 FAM43AQ8N2R8 423 aa11.93□□□□□ -0.5
NIPAL3-201ENST00000003912 TMEM87AQ8NBN3 555 aa11.93□□□□□ -0.5
NIPAL3-201ENST00000003912 XAGE2Q96GT9 111 aa11.93□□□□□ -0.5
NIPAL3-201ENST00000003912 ALG1Q9BT22 464 aa11.93□□□□□ -0.5
NIPAL3-201ENST00000003912 PRDM15P57071 1507 aaPredicted RBP11.93□□□□□ -0.5
NIPAL3-201ENST00000003912 ZBTB7BO15156 539 aaPredicted RBP11.93□□□□□ -0.5
NIPAL3-201ENST00000003912 MBD4O95243 580 aa11.93□□□□□ -0.5
NIPAL3-201ENST00000003912 KANK3Q6NY19 840 aa11.93□□□□□ -0.5
NIPAL3-201ENST00000003912 UNC5CLQ8IV45 518 aa11.93□□□□□ -0.5
NIPAL3-201ENST00000003912 PICK1Q9NRD5 415 aa11.93□□□□□ -0.5
NIPAL3-201ENST00000003912 ANKARQ7Z5J8 1434 aa11.92□□□□□ -0.5
NIPAL3-201ENST00000003912 TIMM10P62072 90 aa11.92□□□□□ -0.5
NIPAL3-201ENST00000003912 FSIP1Q8NA03 581 aa11.92□□□□□ -0.5
NIPAL3-201ENST00000003912 TBC1D22AQ8WUA7 517 aa11.92□□□□□ -0.5
NIPAL3-201ENST00000003912 CETN1Q12798 172 aa11.92□□□□□ -0.5
NIPAL3-201ENST00000003912 CFAP100Q494V2 611 aa11.92□□□□□ -0.5
NIPAL3-201ENST00000003912 KLHL10Q6JEL2 608 aa11.92□□□□□ -0.5
NIPAL3-201ENST00000003912 Q6ZUG5 572 aa11.92□□□□□ -0.5
NIPAL3-201ENST00000003912 KIF1BO60333 1816 aa11.92□□□□□ -0.5
NIPAL3-201ENST00000003912 KIF24Q5T7B8 1368 aa11.92□□□□□ -0.5
NIPAL3-201ENST00000003912 CALML3P27482 149 aa11.92□□□□□ -0.5
NIPAL3-201ENST00000003912 IL17REQ8NFR9 667 aa11.92□□□□□ -0.5
NIPAL3-201ENST00000003912 TNNQ9UQP3 1299 aa11.92□□□□□ -0.5
NIPAL3-201ENST00000003912 MAP3K4Q9Y6R4 1608 aa11.92□□□□□ -0.5
NIPAL3-201ENST00000003912 IDEP14735 1019 aa11.92□□□□□ -0.5
NIPAL3-201ENST00000003912 RPS8P62241 208 aaKnown RBP11.92□□□□□ -0.5
NIPAL3-201ENST00000003912 ERCC4Q92889 916 aaPredicted RBP11.92□□□□□ -0.5
NIPAL3-201ENST00000003912 LIG1P18858 919 aa11.91□□□□□ -0.5
NIPAL3-201ENST00000003912 CCDC183Q5T5S1 534 aa11.91□□□□□ -0.5
NIPAL3-201ENST00000003912 SUCLG2Q96I99 432 aa11.91□□□□□ -0.5
NIPAL3-201ENST00000003912 LRRC2Q9BYS8 371 aa11.91□□□□□ -0.5
NIPAL3-201ENST00000003912 THRAP3Q9Y2W1 955 aaKnown RBP11.91□□□□□ -0.5
NIPAL3-201ENST00000003912 SPDYE3A6NKU9 549 aa11.91□□□□□ -0.5
NIPAL3-201ENST00000003912 CKAP2LQ8IYA6 745 aa11.91□□□□□ -0.5
NIPAL3-201ENST00000003912 DDX19AQ9NUU7 478 aaKnown RBP11.91□□□□□ -0.5
NIPAL3-201ENST00000003912 BRINP3Q76B58 766 aa11.91□□□□□ -0.5
NIPAL3-201ENST00000003912 ZNF594Q96JF6 807 aaPredicted RBP11.91□□□□□ -0.5
NIPAL3-201ENST00000003912 A2ML1A8K2U0 1454 aa11.91□□□□□ -0.5
NIPAL3-201ENST00000003912 TBCAO75347 108 aaKnown RBP11.91□□□□□ -0.5
NIPAL3-201ENST00000003912 CCDC24Q8N4L8 307 aa11.91□□□□□ -0.5
NIPAL3-201ENST00000003912 CCDC181Q5TID7 509 aa11.9□□□□□ -0.5
NIPAL3-201ENST00000003912 MSL1Q68DK7 614 aa11.9□□□□□ -0.5
NIPAL3-201ENST00000003912 TRMT1LQ7Z2T5 733 aaKnown RBP11.9□□□□□ -0.5
NIPAL3-201ENST00000003912 PPIP5K2O43314 1243 aa11.9□□□□□ -0.5
NIPAL3-201ENST00000003912 ERLIN2O94905 339 aa11.9□□□□□ -0.5
NIPAL3-201ENST00000003912 HSP90B2PQ58FF3 399 aa11.9□□□□□ -0.5
NIPAL3-201ENST00000003912 VPS36Q86VN1 386 aa11.9□□□□□ -0.5
NIPAL3-201ENST00000003912 SMC5Q8IY18 1101 aa11.9□□□□□ -0.5
NIPAL3-201ENST00000003912 TBC1D2Q9BYX2 928 aa11.9□□□□□ -0.5
NIPAL3-201ENST00000003912 TMOD4Q9NZQ9 345 aa11.9□□□□□ -0.5
NIPAL3-201ENST00000003912 TET3O43151 1660 aa11.9□□□□□ -0.5
NIPAL3-201ENST00000003912 TRIM37O94972 964 aa11.9□□□□□ -0.5
NIPAL3-201ENST00000003912 GPR162Q16538 588 aa11.9□□□□□ -0.5
NIPAL3-201ENST00000003912 BCS1LQ9Y276 419 aa11.9□□□□□ -0.5
NIPAL3-201ENST00000003912 NEURL1BA8MQ27 555 aa11.9□□□□□ -0.5
NIPAL3-201ENST00000003912 TAF5LO75529 589 aa11.9□□□□□ -0.5
NIPAL3-201ENST00000003912 CTSWP56202 376 aa11.9□□□□□ -0.5
NIPAL3-201ENST00000003912 CNKSR1Q969H4 720 aa11.9□□□□□ -0.5
NIPAL3-201ENST00000003912 VTI1AQ96AJ9 217 aa11.9□□□□□ -0.5
NIPAL3-201ENST00000003912 TBC1D32Q96NH3 1257 aa11.9□□□□□ -0.5
NIPAL3-201ENST00000003912 ARHGEF10LQ9HCE6 1279 aa11.9□□□□□ -0.5
NIPAL3-201ENST00000003912 EPB41L2O43491 1005 aaKnown RBP11.9□□□□□ -0.51
NIPAL3-201ENST00000003912 NEBLO76041 1014 aa11.9□□□□□ -0.51
NIPAL3-201ENST00000003912 SYCP3Q8IZU3 236 aa11.9□□□□□ -0.51
NIPAL3-201ENST00000003912 DBNDD2Q9BQY9 259 aa11.9□□□□□ -0.51
NIPAL3-201ENST00000003912 SSFA2P28290 1259 aa11.89□□□□□ -0.51
NIPAL3-201ENST00000003912 CACNA2D4Q7Z3S7 1137 aa11.89□□□□□ -0.51
NIPAL3-201ENST00000003912 C2CD5Q86YS7 1000 aa11.89□□□□□ -0.51
NIPAL3-201ENST00000003912 RBM28Q9NW13 759 aaKnown RBP11.89□□□□□ -0.51
NIPAL3-201ENST00000003912 GNA11P29992 359 aa11.89□□□□□ -0.51
NIPAL3-201ENST00000003912 TMX3Q96JJ7 454 aa11.89□□□□□ -0.51
NIPAL3-201ENST00000003912 SAP30BPQ9UHR5 308 aaKnown RBP11.89□□□□□ -0.51
NIPAL3-201ENST00000003912 CETN2P41208 172 aa11.89□□□□□ -0.51
NIPAL3-201ENST00000003912 PLEKHM2Q8IWE5 1019 aa11.89□□□□□ -0.51
NIPAL3-201ENST00000003912 TFIP11Q9UBB9 837 aaKnown RBP11.89□□□□□ -0.51
NIPAL3-201ENST00000003912 PARP1P09874 1014 aaKnown RBP11.89□□□□□ -0.51
NIPAL3-201ENST00000003912 RAB3GAP1Q15042 981 aa11.89□□□□□ -0.51
NIPAL3-201ENST00000003912 CREB3L3Q68CJ9 461 aa11.89□□□□□ -0.51
NIPAL3-201ENST00000003912 CCDC102BQ68D86 513 aa11.89□□□□□ -0.51
NIPAL3-201ENST00000003912 DHX32Q7L7V1 743 aaKnown RBP11.89□□□□□ -0.51
NIPAL3-201ENST00000003912 NECAB1Q8N987 351 aa11.89□□□□□ -0.51
NIPAL3-201ENST00000003912 APPBP2Q92624 585 aa11.89□□□□□ -0.51
NIPAL3-201ENST00000003912 TCEANC2Q96MN5 208 aa11.89□□□□□ -0.51
NIPAL3-201ENST00000003912 H7C1D1 291 aa11.88□□□□□ -0.51
NIPAL3-201ENST00000003912 PPFIA3O75145 1194 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms