RNA–Protein interactions for RNA: ENSMUST00000222968.1

Cpsf3-211, Transcript of Cleavage and polyadenylation specificity factor subunit 3, mousemouse

TSL 1 (best) BASIC

Gene Cpsf3, Length 1,858 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3-211ENSMUST00000222968 Sptlc3Q8BG54 563 aa12□□□□□ -0.49
Cpsf3-211ENSMUST00000222968 Iffo2Q8R2V2 512 aa12□□□□□ -0.49
Cpsf3-211ENSMUST00000222968 PdcQ9QW08 244 aa12□□□□□ -0.49
Cpsf3-211ENSMUST00000222968 Zbtb22Q9Z0G7 638 aa12□□□□□ -0.49
Cpsf3-211ENSMUST00000222968 4931408C20RikE9PWP9 1381 aa11.99□□□□□ -0.49
Cpsf3-211ENSMUST00000222968 Trim34bJ3QNR8 485 aa11.99□□□□□ -0.49
Cpsf3-211ENSMUST00000222968 Hap1O35668 628 aa11.99□□□□□ -0.49
Cpsf3-211ENSMUST00000222968 Cyp2d9P11714 504 aa11.99□□□□□ -0.49
Cpsf3-211ENSMUST00000222968 Prl3d1P18121 224 aa11.99□□□□□ -0.49
Cpsf3-211ENSMUST00000222968 Cyp7a1Q64505 503 aa11.99□□□□□ -0.49
Cpsf3-211ENSMUST00000222968 Nxf7Q80SZ6 620 aaKnown RBP11.99□□□□□ -0.49
Cpsf3-211ENSMUST00000222968 Alx1Q8C8B0 326 aa11.99□□□□□ -0.49
Cpsf3-211ENSMUST00000222968 Pms1Q8K119 917 aa11.99□□□□□ -0.49
Cpsf3-211ENSMUST00000222968 Erich6bQ9D4S6 220 aa11.99□□□□□ -0.49
Cpsf3-211ENSMUST00000222968 Rapgef4Q9EQZ6 1011 aa11.99□□□□□ -0.49
Cpsf3-211ENSMUST00000222968 Add3Q9QYB5 706 aaKnown RBP11.99□□□□□ -0.49
Cpsf3-211ENSMUST00000222968 Wdr19Q3UGF1 1341 aa11.99□□□□□ -0.49
Cpsf3-211ENSMUST00000222968 Gm29094F6Q785 221 aa11.98□□□□□ -0.49
Cpsf3-211ENSMUST00000222968 Vps33bP59016 617 aa11.98□□□□□ -0.49
Cpsf3-211ENSMUST00000222968 Csrnp1P59054 583 aa11.98□□□□□ -0.49
Cpsf3-211ENSMUST00000222968 Lins1Q3U1D0 764 aa11.98□□□□□ -0.49
Cpsf3-211ENSMUST00000222968 Ubash3aQ3V3E1 624 aa11.98□□□□□ -0.49
Cpsf3-211ENSMUST00000222968 Olfml1Q8BSH2 233 aa11.98□□□□□ -0.49
Cpsf3-211ENSMUST00000222968 Pm20d1Q8C165 503 aa11.98□□□□□ -0.49
Cpsf3-211ENSMUST00000222968 Riok1Q922Q2 567 aa11.98□□□□□ -0.49
Cpsf3-211ENSMUST00000222968 Gtf2a1Q99PM3 378 aa11.98□□□□□ -0.49
Cpsf3-211ENSMUST00000222968 Mrpl44Q9CY73 333 aaKnown RBP11.98□□□□□ -0.49
Cpsf3-211ENSMUST00000222968 MthfsQ9D110 203 aa11.98□□□□□ -0.49
Cpsf3-211ENSMUST00000222968 Krt85Q9Z2T6 507 aa11.98□□□□□ -0.49
Cpsf3-211ENSMUST00000222968 Setdb1O88974 1307 aa11.98□□□□□ -0.49
Cpsf3-211ENSMUST00000222968 Sall1Q9ER74 1322 aa11.98□□□□□ -0.49
Cpsf3-211ENSMUST00000222968 Lnx1O70263 728 aa11.97□□□□□ -0.49
Cpsf3-211ENSMUST00000222968 Mcm3P25206 812 aaKnown RBP11.97□□□□□ -0.49
Cpsf3-211ENSMUST00000222968 Esco1Q69Z69 843 aa11.97□□□□□ -0.49
Cpsf3-211ENSMUST00000222968 Pdcl2Q78Y63 240 aa11.97□□□□□ -0.49
Cpsf3-211ENSMUST00000222968 Susd4Q8BH32 490 aa11.97□□□□□ -0.49
Cpsf3-211ENSMUST00000222968 Slfnl1Q8BHW9 410 aa11.97□□□□□ -0.49
Cpsf3-211ENSMUST00000222968 Emilin1Q99K41 1017 aa11.97□□□□□ -0.49
Cpsf3-211ENSMUST00000222968 Wdr33Q8K4P0 1330 aaKnown RBP11.97□□□□□ -0.49
Cpsf3-211ENSMUST00000222968 Nhsl1Q8CAF4 1587 aa11.97□□□□□ -0.49
Cpsf3-211ENSMUST00000222968 Cacna1sQ02789 1880 aa11.97□□□□□ -0.49
Cpsf3-211ENSMUST00000222968 Ccdc173A0JLY1 547 aa11.97□□□□□ -0.49
Cpsf3-211ENSMUST00000222968 Prr29B1ARI9 187 aa11.97□□□□□ -0.49
Cpsf3-211ENSMUST00000222968 Cfap73J3QPZ5 306 aa11.97□□□□□ -0.49
Cpsf3-211ENSMUST00000222968 Tom1O88746 492 aa11.97□□□□□ -0.49
Cpsf3-211ENSMUST00000222968 Ercc3P49135 783 aa11.97□□□□□ -0.49
Cpsf3-211ENSMUST00000222968 Pcmtd1P59913 357 aa11.97□□□□□ -0.49
Cpsf3-211ENSMUST00000222968 ErmnQ5EBJ4 281 aa11.97□□□□□ -0.49
Cpsf3-211ENSMUST00000222968 Spty2d1Q68FG3 682 aa11.97□□□□□ -0.49
Cpsf3-211ENSMUST00000222968 Tmem59lQ7TNI2 337 aa11.97□□□□□ -0.49
Cpsf3-211ENSMUST00000222968 Abtb2Q7TQI7 1024 aa11.97□□□□□ -0.49
Cpsf3-211ENSMUST00000222968 Rufy2Q8R4C2 606 aa11.97□□□□□ -0.49
Cpsf3-211ENSMUST00000222968 FAM186AQ9D9R9 1790 aa11.97□□□□□ -0.49
Cpsf3-211ENSMUST00000222968 Scn11aQ9R053 1765 aa11.97□□□□□ -0.49
Cpsf3-211ENSMUST00000222968 Myh3P13541 1940 aa11.97□□□□□ -0.49
Cpsf3-211ENSMUST00000222968 Znfx1Q8R151 1909 aaKnown RBP11.97□□□□□ -0.49
Cpsf3-211ENSMUST00000222968 Vmn2r23E9PXI5 849 aa11.96□□□□□ -0.49
Cpsf3-211ENSMUST00000222968 Pcdhb9E9Q5G2 828 aa11.96□□□□□ -0.49
Cpsf3-211ENSMUST00000222968 Cct2P80314 535 aaKnown RBP11.96□□□□□ -0.49
Cpsf3-211ENSMUST00000222968 Ccdc162pQ0VG85 912 aa11.96□□□□□ -0.49
Cpsf3-211ENSMUST00000222968 Ddb1Q3U1J4 1140 aaKnown RBP11.96□□□□□ -0.49
Cpsf3-211ENSMUST00000222968 Hand2Q61039 217 aa11.96□□□□□ -0.49
Cpsf3-211ENSMUST00000222968 Anp32cQ64G17 123 aa11.96□□□□□ -0.49
Cpsf3-211ENSMUST00000222968 Nme8Q715T0 586 aa11.96□□□□□ -0.49
Cpsf3-211ENSMUST00000222968 R3hcc1Q8BSI6 488 aa11.96□□□□□ -0.49
Cpsf3-211ENSMUST00000222968 ImmtQ8CAQ8 757 aaKnown RBP11.96□□□□□ -0.49
Cpsf3-211ENSMUST00000222968 Alg3Q8K2A8 438 aa11.96□□□□□ -0.49
Cpsf3-211ENSMUST00000222968 Rtn4Q99P72 1162 aaKnown RBP11.96□□□□□ -0.49
Cpsf3-211ENSMUST00000222968 Sept12Q9D451 317 aa11.96□□□□□ -0.49
Cpsf3-211ENSMUST00000222968 Plch1Q4KWH5 1682 aa11.96□□□□□ -0.5
Cpsf3-211ENSMUST00000222968 1700113H08RikE9Q9Q5 327 aa11.95□□□□□ -0.5
Cpsf3-211ENSMUST00000222968 Gm4340L7N2C4 268 aa11.95□□□□□ -0.5
Cpsf3-211ENSMUST00000222968 Snrpa1P57784 255 aaKnown RBP11.95□□□□□ -0.5
Cpsf3-211ENSMUST00000222968 Tmem109Q3UBX0 243 aa11.95□□□□□ -0.5
Cpsf3-211ENSMUST00000222968 Usp28Q5I043 1051 aa11.95□□□□□ -0.5
Cpsf3-211ENSMUST00000222968 Rrp12Q6P5B0 1295 aaKnown RBP11.95□□□□□ -0.5
Cpsf3-211ENSMUST00000222968 Fsd1Q7TPM6 496 aa11.95□□□□□ -0.5
Cpsf3-211ENSMUST00000222968 Ttc27Q8CD92 847 aa11.95□□□□□ -0.5
Cpsf3-211ENSMUST00000222968 Adam1bQ8R534 806 aa11.95□□□□□ -0.5
Cpsf3-211ENSMUST00000222968 Plekho1Q9JIY0 408 aa11.95□□□□□ -0.5
Cpsf3-211ENSMUST00000222968 CgnP59242 1191 aa11.95□□□□□ -0.5
Cpsf3-211ENSMUST00000222968 Ifit1Q64282 463 aa11.95□□□□□ -0.5
Cpsf3-211ENSMUST00000222968 Miga2Q8BK03 593 aa11.95□□□□□ -0.5
Cpsf3-211ENSMUST00000222968 SowahdQ8BY98 327 aa11.95□□□□□ -0.5
Cpsf3-211ENSMUST00000222968 Mtmr3Q8K296 1196 aa11.95□□□□□ -0.5
Cpsf3-211ENSMUST00000222968 Kcnq3Q8K3F6 873 aa11.95□□□□□ -0.5
Cpsf3-211ENSMUST00000222968 Myh2G3UW82 1942 aa11.94□□□□□ -0.5
Cpsf3-211ENSMUST00000222968 Qtrt2B8ZXI1 415 aa11.94□□□□□ -0.5
Cpsf3-211ENSMUST00000222968 Usp25P57080 1055 aa11.94□□□□□ -0.5
Cpsf3-211ENSMUST00000222968 Pank2Q3U4S0 443 aa11.94□□□□□ -0.5
Cpsf3-211ENSMUST00000222968 Slf2Q6P9P0 1278 aa11.94□□□□□ -0.5
Cpsf3-211ENSMUST00000222968 Pnma3Q8JZW8 466 aa11.94□□□□□ -0.5
Cpsf3-211ENSMUST00000222968 Trim34aQ99PP6 485 aa11.94□□□□□ -0.5
Cpsf3-211ENSMUST00000222968 Ttc14Q9CSP9 761 aa11.94□□□□□ -0.5
Cpsf3-211ENSMUST00000222968 Cyp3a59D3Z2W7 503 aa11.93□□□□□ -0.5
Cpsf3-211ENSMUST00000222968 Rtkn2Q14B46 604 aa11.93□□□□□ -0.5
Cpsf3-211ENSMUST00000222968 Cep63Q3UPP8 700 aa11.93□□□□□ -0.5
Cpsf3-211ENSMUST00000222968 Snx13Q6PHS6 957 aa11.93□□□□□ -0.5
Cpsf3-211ENSMUST00000222968 Pcdhb22Q91XZ8 794 aa11.93□□□□□ -0.5
Cpsf3-211ENSMUST00000222968 Pes1Q9EQ61 584 aaKnown RBP11.93□□□□□ -0.5
Retrieved 100 of 22,080 RNA–protein pairs in 14.7 ms