RNA–Protein interactions for RNA: ENSMUST00000196908.4

Pdlim5-209, Transcript of PDZ and LIM domain protein 5, mousemouse

TSL 1 (best) BASIC

Gene Pdlim5, Length 1,196 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-209ENSMUST00000196908 SisF8VQM5 1818 aa11.02□□□□□ -0.64
Pdlim5-209ENSMUST00000196908 Upf2A2AT37 1269 aaKnown RBP11.02□□□□□ -0.65
Pdlim5-209ENSMUST00000196908 Phldb3E9QAF4 648 aa11.02□□□□□ -0.65
Pdlim5-209ENSMUST00000196908 Erich4Q3UNU4 136 aa11.02□□□□□ -0.65
Pdlim5-209ENSMUST00000196908 CbarpQ66L44 698 aa11.02□□□□□ -0.65
Pdlim5-209ENSMUST00000196908 Trim52Q8CDV4 233 aa11.02□□□□□ -0.65
Pdlim5-209ENSMUST00000196908 Dydc2Q9D3X8 139 aa11.02□□□□□ -0.65
Pdlim5-209ENSMUST00000196908 Adarb2Q9JI20 745 aa11.02□□□□□ -0.65
Pdlim5-209ENSMUST00000196908 Ddx20Q9JJY4 825 aaKnown RBP11.02□□□□□ -0.65
Pdlim5-209ENSMUST00000196908 MypnQ5DTJ9 1315 aa11.02□□□□□ -0.65
Pdlim5-209ENSMUST00000196908 Erbb4Q61527 1308 aa11.02□□□□□ -0.65
Pdlim5-209ENSMUST00000196908 Col1a2Q01149 1372 aa11.02□□□□□ -0.65
Pdlim5-209ENSMUST00000196908 Hspa2P17156 633 aa11.01□□□□□ -0.65
Pdlim5-209ENSMUST00000196908 Igfbp6P47880 238 aa11.01□□□□□ -0.65
Pdlim5-209ENSMUST00000196908 Eif4a1P60843 406 aaKnown RBP11.01□□□□□ -0.65
Pdlim5-209ENSMUST00000196908 Trmt1Q3TX08 663 aa11.01□□□□□ -0.65
Pdlim5-209ENSMUST00000196908 Best3Q6H1V1 669 aa11.01□□□□□ -0.65
Pdlim5-209ENSMUST00000196908 SympkQ80X82 1284 aa11.01□□□□□ -0.65
Pdlim5-209ENSMUST00000196908 Fam155aQ8CCS2 467 aa11.01□□□□□ -0.65
Pdlim5-209ENSMUST00000196908 Pcdhb20Q91XZ9 799 aa11.01□□□□□ -0.65
Pdlim5-209ENSMUST00000196908 U2af1Q9D883 239 aaKnown RBP11.01□□□□□ -0.65
Pdlim5-209ENSMUST00000196908 Armc3A2AU72 881 aa11□□□□□ -0.65
Pdlim5-209ENSMUST00000196908 Ttll7A4Q9F0 912 aa11□□□□□ -0.65
Pdlim5-209ENSMUST00000196908 AaasP58742 546 aa11□□□□□ -0.65
Pdlim5-209ENSMUST00000196908 Specc1Q5SXY1 1067 aa11□□□□□ -0.65
Pdlim5-209ENSMUST00000196908 Kctd12Q6WVG3 327 aa11□□□□□ -0.65
Pdlim5-209ENSMUST00000196908 Epc2Q8C0I4 808 aa11□□□□□ -0.65
Pdlim5-209ENSMUST00000196908 Lman1lQ8VCD3 505 aa11□□□□□ -0.65
Pdlim5-209ENSMUST00000196908 Prkg1P0C605 671 aa10.99□□□□□ -0.65
Pdlim5-209ENSMUST00000196908 Serpinb2P12388 415 aa10.99□□□□□ -0.65
Pdlim5-209ENSMUST00000196908 Spryd7Q3TFQ1 196 aa10.99□□□□□ -0.65
Pdlim5-209ENSMUST00000196908 Mphosph10Q810V0 681 aaKnown RBP10.99□□□□□ -0.65
Pdlim5-209ENSMUST00000196908 Ufsp1Q9CZP0 217 aa10.99□□□□□ -0.65
Pdlim5-209ENSMUST00000196908 Pdcd7Q9WTY1 482 aa10.99□□□□□ -0.65
Pdlim5-209ENSMUST00000196908 Ep400Q8CHI8 3072 aaKnown RBP10.98□□□□□ -0.65
Pdlim5-209ENSMUST00000196908 Mageb2A2AHM0 380 aa10.98□□□□□ -0.65
Pdlim5-209ENSMUST00000196908 GabreA2AMW3 916 aa10.98□□□□□ -0.65
Pdlim5-209ENSMUST00000196908 Krtap4-2B1AQ85 167 aa10.98□□□□□ -0.65
Pdlim5-209ENSMUST00000196908 Nolc1E9Q5C9 702 aaKnown RBP10.98□□□□□ -0.65
Pdlim5-209ENSMUST00000196908 UncxO08934 530 aa10.98□□□□□ -0.65
Pdlim5-209ENSMUST00000196908 CalcaP70160 136 aa10.98□□□□□ -0.65
Pdlim5-209ENSMUST00000196908 Fbxo31Q3TQF0 507 aa10.98□□□□□ -0.65
Pdlim5-209ENSMUST00000196908 Igflr1Q3U4N7 345 aa10.98□□□□□ -0.65
Pdlim5-209ENSMUST00000196908 Wdr43Q6ZQL4 677 aaKnown RBP10.98□□□□□ -0.65
Pdlim5-209ENSMUST00000196908 Amer2Q8CCJ4 672 aa10.98□□□□□ -0.65
Pdlim5-209ENSMUST00000196908 Ralgps2Q9ERD6 590 aa10.98□□□□□ -0.65
Pdlim5-209ENSMUST00000196908 Brca1P48754 1812 aa10.98□□□□□ -0.65
Pdlim5-209ENSMUST00000196908 Cypt3B1AY64 174 aa10.97□□□□□ -0.65
Pdlim5-209ENSMUST00000196908 Pibf1E9Q6K3 756 aa10.97□□□□□ -0.65
Pdlim5-209ENSMUST00000196908 Gm13128L7MU96 475 aa10.97□□□□□ -0.65
Pdlim5-209ENSMUST00000196908 Esx1O88933 382 aa10.97□□□□□ -0.65
Pdlim5-209ENSMUST00000196908 Pde4aO89084 844 aa10.97□□□□□ -0.65
Pdlim5-209ENSMUST00000196908 Irf6P97431 467 aa10.97□□□□□ -0.65
Pdlim5-209ENSMUST00000196908 Trpv1Q704Y3 839 aa10.97□□□□□ -0.65
Pdlim5-209ENSMUST00000196908 HlfQ8BW74 295 aa10.97□□□□□ -0.65
Pdlim5-209ENSMUST00000196908 Sgpl1Q8R0X7 568 aa10.97□□□□□ -0.65
Pdlim5-209ENSMUST00000196908 Ndfip2Q91ZP6 311 aa10.97□□□□□ -0.65
Pdlim5-209ENSMUST00000196908 Aldh1b1Q9CZS1 519 aa10.97□□□□□ -0.65
Pdlim5-209ENSMUST00000196908 S1pr4Q9Z0L1 386 aa10.97□□□□□ -0.65
Pdlim5-209ENSMUST00000196908 Piezo1E2JF22 2547 aa10.97□□□□□ -0.65
Pdlim5-209ENSMUST00000196908 HttP42859 3119 aa10.97□□□□□ -0.65
Pdlim5-209ENSMUST00000196908 Sipa1l3G3X9J0 1776 aa10.96□□□□□ -0.65
Pdlim5-209ENSMUST00000196908 Carmil3Q3UFQ8 1375 aa10.96□□□□□ -0.65
Pdlim5-209ENSMUST00000196908 Fzd1O70421 642 aa10.96□□□□□ -0.65
Pdlim5-209ENSMUST00000196908 Kansl1lQ5DTI6 991 aa10.96□□□□□ -0.65
Pdlim5-209ENSMUST00000196908 Large2Q5XPT3 690 aa10.96□□□□□ -0.65
Pdlim5-209ENSMUST00000196908 Ces5aQ6AW46 575 aa10.96□□□□□ -0.65
Pdlim5-209ENSMUST00000196908 Cyp2d12Q8BVD2 504 aa10.96□□□□□ -0.65
Pdlim5-209ENSMUST00000196908 Sf3b3Q921M3 1217 aaKnown RBP10.96□□□□□ -0.65
Pdlim5-209ENSMUST00000196908 Ms4a4cQ9D3F6 226 aa10.96□□□□□ -0.65
Pdlim5-209ENSMUST00000196908 Popdc2Q9ES82 367 aa10.96□□□□□ -0.65
Pdlim5-209ENSMUST00000196908 Gm15262A0A140LIQ5 728 aa10.95□□□□□ -0.66
Pdlim5-209ENSMUST00000196908 CanxP35564 591 aaKnown RBP10.95□□□□□ -0.66
Pdlim5-209ENSMUST00000196908 Rps8P62242 208 aaKnown RBP10.95□□□□□ -0.66
Pdlim5-209ENSMUST00000196908 Cyp7a1Q64505 503 aa10.95□□□□□ -0.66
Pdlim5-209ENSMUST00000196908 Skiv2lQ6NZR5 1244 aa10.95□□□□□ -0.66
Pdlim5-209ENSMUST00000196908 GptQ8QZR5 496 aa10.95□□□□□ -0.66
Pdlim5-209ENSMUST00000196908 Itgbl1Q8VDV0 494 aa10.95□□□□□ -0.66
Pdlim5-209ENSMUST00000196908 Lgr5Q9Z1P4 907 aa10.95□□□□□ -0.66
Pdlim5-209ENSMUST00000196908 Mtmr2Q9Z2D1 643 aa10.95□□□□□ -0.66
Pdlim5-209ENSMUST00000196908 Szt2A2A9C3 3431 aa10.95□□□□□ -0.66
Pdlim5-209ENSMUST00000196908 NrapQ80XB4 1728 aa10.95□□□□□ -0.66
Pdlim5-209ENSMUST00000196908 Map3k15A2AQW0 1331 aa10.94□□□□□ -0.66
Pdlim5-209ENSMUST00000196908 Smim22J3QP37 91 aa10.94□□□□□ -0.66
Pdlim5-209ENSMUST00000196908 LdhdQ7TNG8 484 aa10.94□□□□□ -0.66
Pdlim5-209ENSMUST00000196908 Tmc4Q7TQ65 694 aa10.94□□□□□ -0.66
Pdlim5-209ENSMUST00000196908 Ptcd2Q8R3K3 381 aaKnown RBP10.94□□□□□ -0.66
Pdlim5-209ENSMUST00000196908 Naa16Q9DBB4 864 aa10.94□□□□□ -0.66
Pdlim5-209ENSMUST00000196908 Cd2apQ9JLQ0 637 aa10.94□□□□□ -0.66
Pdlim5-209ENSMUST00000196908 Ankrd31A0A140LI88 1765 aa10.93□□□□□ -0.66
Pdlim5-209ENSMUST00000196908 Wnt10bP48614 389 aa10.93□□□□□ -0.66
Pdlim5-209ENSMUST00000196908 VeztQ3ZK22 780 aa10.93□□□□□ -0.66
Pdlim5-209ENSMUST00000196908 Rad21Q61550 635 aaKnown RBP10.93□□□□□ -0.66
Pdlim5-209ENSMUST00000196908 Kbtbd13Q8C828 458 aa10.93□□□□□ -0.66
Pdlim5-209ENSMUST00000196908 JmyQ9QXM1 983 aa10.93□□□□□ -0.66
Pdlim5-209ENSMUST00000196908 Kifc2O08672 792 aa10.92□□□□□ -0.66
Pdlim5-209ENSMUST00000196908 Fgl2P12804 432 aa10.92□□□□□ -0.66
Pdlim5-209ENSMUST00000196908 Terf1P70371 421 aa10.92□□□□□ -0.66
Pdlim5-209ENSMUST00000196908 Ankle2Q6P1H6 964 aa10.92□□□□□ -0.66
Pdlim5-209ENSMUST00000196908 Fam205cQ80YD3 371 aa10.92□□□□□ -0.66
Retrieved 100 of 22,080 RNA–protein pairs in 36.4 ms