RNA–Protein interactions for RNA: ENSMUST00000173727.7

Lig3-212, Transcript of DNA ligase 3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Lig3, Length 3,636 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-212ENSMUST00000173727 Rbm10Q99KG3 930 aaKnown RBP12.86□□□□□ -0.35
Lig3-212ENSMUST00000173727 Lgr5Q9Z1P4 907 aa12.86□□□□□ -0.35
Lig3-212ENSMUST00000173727 Scn11aQ9R053 1765 aa12.86□□□□□ -0.35
Lig3-212ENSMUST00000173727 Kif13bA0A286YCV9 1847 aa12.86□□□□□ -0.35
Lig3-212ENSMUST00000173727 Fam198bQ3UPI1 517 aa12.86□□□□□ -0.35
Lig3-212ENSMUST00000173727 Adarb2Q9JI20 745 aa12.86□□□□□ -0.35
Lig3-212ENSMUST00000173727 Hmg20bQ9Z104 317 aa12.86□□□□□ -0.35
Lig3-212ENSMUST00000173727 Jdp2P97875 163 aa12.86□□□□□ -0.35
Lig3-212ENSMUST00000173727 MpndQ3TV65 487 aa12.86□□□□□ -0.35
Lig3-212ENSMUST00000173727 Map10Q8BJS7 891 aa12.86□□□□□ -0.35
Lig3-212ENSMUST00000173727 Q9D9S1 216 aa12.86□□□□□ -0.35
Lig3-212ENSMUST00000173727 Myh7Q91Z83 1935 aa12.85□□□□□ -0.35
Lig3-212ENSMUST00000173727 Vwa3bJ9JI28 736 aa12.85□□□□□ -0.35
Lig3-212ENSMUST00000173727 AidaQ8C4Q6 305 aa12.85□□□□□ -0.35
Lig3-212ENSMUST00000173727 Rassf8Q8CJ96 419 aa12.85□□□□□ -0.35
Lig3-212ENSMUST00000173727 ParvgQ9ERD8 331 aa12.85□□□□□ -0.35
Lig3-212ENSMUST00000173727 Myo3bQ1EG27 1305 aa12.85□□□□□ -0.35
Lig3-212ENSMUST00000173727 Casp1P29452 402 aa12.85□□□□□ -0.35
Lig3-212ENSMUST00000173727 Tti2Q8BGV4 512 aa12.85□□□□□ -0.35
Lig3-212ENSMUST00000173727 Ccdc7Q9D541 371 aa12.85□□□□□ -0.35
Lig3-212ENSMUST00000173727 Psma5Q9Z2U1 241 aaKnown RBP12.85□□□□□ -0.35
Lig3-212ENSMUST00000173727 Spata31d1bE9QA57 1361 aa12.85□□□□□ -0.35
Lig3-212ENSMUST00000173727 Slurp2P0DP59 97 aa12.85□□□□□ -0.35
Lig3-212ENSMUST00000173727 Il17raQ60943 864 aa12.85□□□□□ -0.35
Lig3-212ENSMUST00000173727 Cchcr1Q8K2I2 770 aa12.84□□□□□ -0.35
Lig3-212ENSMUST00000173727 CpzQ8R4V4 654 aa12.84□□□□□ -0.35
Lig3-212ENSMUST00000173727 Erich6bQ9D4S6 220 aa12.84□□□□□ -0.35
Lig3-212ENSMUST00000173727 Appbp2Q9DAX9 585 aa12.84□□□□□ -0.35
Lig3-212ENSMUST00000173727 Osbpl5Q9ER64 874 aa12.84□□□□□ -0.35
Lig3-212ENSMUST00000173727 RubcnlQ3TD16 648 aa12.84□□□□□ -0.35
Lig3-212ENSMUST00000173727 Nme8Q715T0 586 aa12.84□□□□□ -0.35
Lig3-212ENSMUST00000173727 St5Q924W7 1134 aa12.84□□□□□ -0.35
Lig3-212ENSMUST00000173727 Emilin1Q99K41 1017 aa12.84□□□□□ -0.35
Lig3-212ENSMUST00000173727 Il15P48346 162 aa12.83□□□□□ -0.35
Lig3-212ENSMUST00000173727 Pram1Q6BCL1 675 aa12.83□□□□□ -0.35
Lig3-212ENSMUST00000173727 Msl1Q6PDM1 616 aa12.83□□□□□ -0.35
Lig3-212ENSMUST00000173727 Cdca7lQ922M5 438 aa12.83□□□□□ -0.35
Lig3-212ENSMUST00000173727 Nup98Q6PFD9 1816 aaKnown RBP12.83□□□□□ -0.36
Lig3-212ENSMUST00000173727 Kcnb2A6H8H5 907 aa12.83□□□□□ -0.36
Lig3-212ENSMUST00000173727 Aknad1E9Q8N6 675 aa12.83□□□□□ -0.36
Lig3-212ENSMUST00000173727 Oas2E9Q9A9 742 aa12.83□□□□□ -0.36
Lig3-212ENSMUST00000173727 Hap1O35668 628 aa12.83□□□□□ -0.36
Lig3-212ENSMUST00000173727 Hspd1P63038 573 aaKnown RBP12.83□□□□□ -0.36
Lig3-212ENSMUST00000173727 Trim56Q80VI1 734 aaKnown RBP12.83□□□□□ -0.36
Lig3-212ENSMUST00000173727 Dydc2Q9D3X8 139 aa12.83□□□□□ -0.36
Lig3-212ENSMUST00000173727 Mroh6V9GX81 722 aa12.83□□□□□ -0.36
Lig3-212ENSMUST00000173727 Map3k15A2AQW0 1331 aa12.83□□□□□ -0.36
Lig3-212ENSMUST00000173727 Celf1P28659 486 aaKnown RBP12.83□□□□□ -0.36
Lig3-212ENSMUST00000173727 Zkscan1Q8BGS3 561 aaKnown RBP12.83□□□□□ -0.36
Lig3-212ENSMUST00000173727 Pla2g4fQ50L41 855 aa12.82□□□□□ -0.36
Lig3-212ENSMUST00000173727 Edrf1Q6GQV7 1239 aa12.82□□□□□ -0.36
Lig3-212ENSMUST00000173727 Atxn2lQ7TQH0 1049 aaKnown RBP12.82□□□□□ -0.36
Lig3-212ENSMUST00000173727 Strip1Q8C079 837 aa12.82□□□□□ -0.36
Lig3-212ENSMUST00000173727 Izumo3A6PWV3 263 aa12.82□□□□□ -0.36
Lig3-212ENSMUST00000173727 Ddit3P35639 168 aa12.82□□□□□ -0.36
Lig3-212ENSMUST00000173727 Myh3P13541 1940 aa12.82□□□□□ -0.36
Lig3-212ENSMUST00000173727 Prdm11A2AGX3 565 aa12.82□□□□□ -0.36
Lig3-212ENSMUST00000173727 Usp44Q8C2S0 711 aa12.82□□□□□ -0.36
Lig3-212ENSMUST00000173727 Irs4Q9Z0Y7 1216 aa12.82□□□□□ -0.36
Lig3-212ENSMUST00000173727 Znf609Q8BZ47 1413 aa12.81□□□□□ -0.36
Lig3-212ENSMUST00000173727 Prl7d1P04769 244 aa12.81□□□□□ -0.36
Lig3-212ENSMUST00000173727 1810065E05RikQ5NC41 235 aa12.81□□□□□ -0.36
Lig3-212ENSMUST00000173727 Pof1bQ8K4L4 587 aa12.81□□□□□ -0.36
Lig3-212ENSMUST00000173727 Irgm2A0A140LIF8 407 aa12.81□□□□□ -0.36
Lig3-212ENSMUST00000173727 Prl7a2O54831 253 aa12.81□□□□□ -0.36
Lig3-212ENSMUST00000173727 Slc7a3P70423 618 aa12.81□□□□□ -0.36
Lig3-212ENSMUST00000173727 Ddx19aQ61655 478 aaKnown RBP12.81□□□□□ -0.36
Lig3-212ENSMUST00000173727 HlfQ8BW74 295 aa12.81□□□□□ -0.36
Lig3-212ENSMUST00000173727 Adam1bQ8R534 806 aa12.81□□□□□ -0.36
Lig3-212ENSMUST00000173727 HdlbpQ8VDJ3 1268 aaKnown RBP12.81□□□□□ -0.36
Lig3-212ENSMUST00000173727 Rufy3Q9D394 469 aa12.81□□□□□ -0.36
Lig3-212ENSMUST00000173727 Myh15E9Q264 1925 aa12.81□□□□□ -0.36
Lig3-212ENSMUST00000173727 Heg1E9Q7X6 1337 aa12.81□□□□□ -0.36
Lig3-212ENSMUST00000173727 F2rP30558 430 aa12.81□□□□□ -0.36
Lig3-212ENSMUST00000173727 Wdhd1P59328 1117 aa12.8□□□□□ -0.36
Lig3-212ENSMUST00000173727 Washc4Q3UMB9 1173 aa12.8□□□□□ -0.36
Lig3-212ENSMUST00000173727 Slc14a2Q8R4T9 930 aa12.8□□□□□ -0.36
Lig3-212ENSMUST00000173727 Pdia4P08003 638 aaKnown RBP12.8□□□□□ -0.36
Lig3-212ENSMUST00000173727 Tmem67Q8BR76 992 aa12.8□□□□□ -0.36
Lig3-212ENSMUST00000173727 Rps6kb1Q8BSK8 525 aa12.8□□□□□ -0.36
Lig3-212ENSMUST00000173727 Ptcd1Q8C2E4 695 aaKnown RBP12.8□□□□□ -0.36
Lig3-212ENSMUST00000173727 Tceanc2Q8R2M0 207 aa12.8□□□□□ -0.36
Lig3-212ENSMUST00000173727 Sh3bp5lQ99LH9 392 aa12.8□□□□□ -0.36
Lig3-212ENSMUST00000173727 EvplQ9D952 2035 aa12.8□□□□□ -0.36
Lig3-212ENSMUST00000173727 1700006A11RikB9EHI3 544 aa12.8□□□□□ -0.36
Lig3-212ENSMUST00000173727 St18Q80TY4 1045 aa12.8□□□□□ -0.36
Lig3-212ENSMUST00000173727 SnrkQ8VDU5 748 aa12.8□□□□□ -0.36
Lig3-212ENSMUST00000173727 Chrna2Q91X60 512 aa12.8□□□□□ -0.36
Lig3-212ENSMUST00000173727 FliiQ9JJ28 1271 aa12.8□□□□□ -0.36
Lig3-212ENSMUST00000173727 Rhbdl3P58873 404 aa12.79□□□□□ -0.36
Lig3-212ENSMUST00000173727 Myh4Q5SX39 1939 aa12.79□□□□□ -0.36
Lig3-212ENSMUST00000173727 Pkp1P97350 728 aaKnown RBP12.79□□□□□ -0.36
Lig3-212ENSMUST00000173727 Ube3cQ80U95 1083 aa12.79□□□□□ -0.36
Lig3-212ENSMUST00000173727 Sept9Q80UG5 583 aa12.79□□□□□ -0.36
Lig3-212ENSMUST00000173727 Adamtsl1Q8BLI0 1745 aa12.79□□□□□ -0.36
Lig3-212ENSMUST00000173727 Sept12Q9D451 317 aa12.79□□□□□ -0.36
Lig3-212ENSMUST00000173727 Pcdhb9E9Q5G2 828 aa12.78□□□□□ -0.36
Lig3-212ENSMUST00000173727 Ell2Q3UKU1 639 aa12.78□□□□□ -0.36
Lig3-212ENSMUST00000173727 Sp8Q8BMJ8 486 aa12.78□□□□□ -0.36
Lig3-212ENSMUST00000173727 Lmod1Q8BVA4 595 aa12.78□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 21.8 ms