RNA–Protein interactions for RNA: ENSMUST00000160721.7

Pcdh1-203, Transcript of Protocadherin 1 (Fragment), mousemouse

TSL 5 BASIC

Gene Pcdh1, Length 5,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-203ENSMUST00000160721 Abtb2Q7TQI7 1024 aa18.25■□□□□ 0.51
Pcdh1-203ENSMUST00000160721 Slc4a8Q8JZR6 1089 aa18.25■□□□□ 0.51
Pcdh1-203ENSMUST00000160721 Olr1Q9EQ09 363 aa18.25■□□□□ 0.51
Pcdh1-203ENSMUST00000160721 Tns3Q5SSZ5 1440 aa18.25■□□□□ 0.51
Pcdh1-203ENSMUST00000160721 Zfp42P22227 288 aa18.24■□□□□ 0.51
Pcdh1-203ENSMUST00000160721 Klhl30Q8C3F7 581 aa18.24■□□□□ 0.51
Pcdh1-203ENSMUST00000160721 Krt23Q99PS0 422 aa18.24■□□□□ 0.51
Pcdh1-203ENSMUST00000160721 Abcc3B2RX12 1523 aa18.24■□□□□ 0.51
Pcdh1-203ENSMUST00000160721 Zswim4Q8C7B8 1101 aa18.24■□□□□ 0.51
Pcdh1-203ENSMUST00000160721 RgmbQ7TQ33 436 aa18.24■□□□□ 0.51
Pcdh1-203ENSMUST00000160721 Triml1Q8BVP1 470 aa18.24■□□□□ 0.51
Pcdh1-203ENSMUST00000160721 Hsf2bpQ9D4G2 338 aa18.24■□□□□ 0.51
Pcdh1-203ENSMUST00000160721 Prpf40aQ9R1C7 953 aaKnown RBP18.24■□□□□ 0.51
Pcdh1-203ENSMUST00000160721 Znf335A2A5K6 1337 aa18.24■□□□□ 0.51
Pcdh1-203ENSMUST00000160721 Pdcd6ipQ9WU78 869 aaKnown RBP18.24■□□□□ 0.51
Pcdh1-203ENSMUST00000160721 U2af1l4Q8BGJ9 220 aa18.24■□□□□ 0.51
Pcdh1-203ENSMUST00000160721 Slx4ipQ9D7Y9 413 aa18.24■□□□□ 0.51
Pcdh1-203ENSMUST00000160721 Dnm1P39053 867 aa18.23■□□□□ 0.51
Pcdh1-203ENSMUST00000160721 Nf2P46662 596 aa18.23■□□□□ 0.51
Pcdh1-203ENSMUST00000160721 Nap1l2P51860 460 aa18.23■□□□□ 0.51
Pcdh1-203ENSMUST00000160721 Cavin2Q63918 418 aaKnown RBP18.23■□□□□ 0.51
Pcdh1-203ENSMUST00000160721 Ddx27Q921N6 760 aaKnown RBP18.23■□□□□ 0.51
Pcdh1-203ENSMUST00000160721 Hdac6Q9Z2V5 1149 aa18.23■□□□□ 0.51
Pcdh1-203ENSMUST00000160721 Hspa1lP16627 641 aa18.23■□□□□ 0.51
Pcdh1-203ENSMUST00000160721 Aifm3Q3TY86 605 aa18.23■□□□□ 0.51
Pcdh1-203ENSMUST00000160721 Pla2g4fQ50L41 855 aa18.23■□□□□ 0.51
Pcdh1-203ENSMUST00000160721 Ctnna2Q61301 953 aa18.23■□□□□ 0.51
Pcdh1-203ENSMUST00000160721 Syt1P46096 421 aa18.23■□□□□ 0.51
Pcdh1-203ENSMUST00000160721 Dok7Q18PE0 504 aa18.23■□□□□ 0.51
Pcdh1-203ENSMUST00000160721 Kiaa1211Q5PR69 1207 aa18.23■□□□□ 0.51
Pcdh1-203ENSMUST00000160721 RragbQ6NTA4 374 aa18.23■□□□□ 0.51
Pcdh1-203ENSMUST00000160721 Acbd3Q8BMP6 525 aa18.23■□□□□ 0.51
Pcdh1-203ENSMUST00000160721 Kiaa1551Q5DTW7 1521 aa18.23■□□□□ 0.51
Pcdh1-203ENSMUST00000160721 TchpQ3TVW5 497 aa18.23■□□□□ 0.51
Pcdh1-203ENSMUST00000160721 Ncoa4Q5U4H9 625 aa18.23■□□□□ 0.51
Pcdh1-203ENSMUST00000160721 Ano6Q6P9J9 911 aa18.23■□□□□ 0.51
Pcdh1-203ENSMUST00000160721 Ttc12Q8BW49 704 aa18.23■□□□□ 0.51
Pcdh1-203ENSMUST00000160721 HmcesQ8R1M0 353 aaKnown RBP18.23■□□□□ 0.51
Pcdh1-203ENSMUST00000160721 Pcdhb5Q91XZ5 792 aa18.23■□□□□ 0.51
Pcdh1-203ENSMUST00000160721 Ttc21aQ8C0S4 1314 aa18.23■□□□□ 0.51
Pcdh1-203ENSMUST00000160721 DlatQ8BMF4 642 aa18.22■□□□□ 0.51
Pcdh1-203ENSMUST00000160721 Cnot6lQ8VEG6 555 aa18.22■□□□□ 0.51
Pcdh1-203ENSMUST00000160721 Dnmt1P13864 1620 aaKnown RBP18.22■□□□□ 0.51
Pcdh1-203ENSMUST00000160721 Eme2Q56A04 373 aa18.22■□□□□ 0.51
Pcdh1-203ENSMUST00000160721 Ctdp1Q7TSG2 960 aa18.22■□□□□ 0.51
Pcdh1-203ENSMUST00000160721 Bloc1s4Q8VED2 215 aa18.22■□□□□ 0.51
Pcdh1-203ENSMUST00000160721 Kdm6bQ5NCY0 1641 aa18.22■□□□□ 0.51
Pcdh1-203ENSMUST00000160721 Sbno1Q689Z5 1390 aa18.22■□□□□ 0.51
Pcdh1-203ENSMUST00000160721 Dcaf5Q80T85 946 aa18.22■□□□□ 0.51
Pcdh1-203ENSMUST00000160721 Zkscan8Q8BSL0 588 aa18.22■□□□□ 0.51
Pcdh1-203ENSMUST00000160721 StambpQ9CQ26 424 aa18.22■□□□□ 0.51
Pcdh1-203ENSMUST00000160721 Ccdc94Q9D6J3 314 aa18.22■□□□□ 0.51
Pcdh1-203ENSMUST00000160721 Plch2A2AP18 1501 aa18.22■□□□□ 0.51
Pcdh1-203ENSMUST00000160721 WtapQ9ER69 396 aa18.21■□□□□ 0.51
Pcdh1-203ENSMUST00000160721 Cdhr2E9Q7P9 1308 aa18.21■□□□□ 0.51
Pcdh1-203ENSMUST00000160721 Tom1l2Q5SRX1 507 aa18.21■□□□□ 0.51
Pcdh1-203ENSMUST00000160721 Hip1rQ9JKY5 1068 aa18.21■□□□□ 0.51
Pcdh1-203ENSMUST00000160721 Adgrl1Q80TR1 1466 aa18.21■□□□□ 0.51
Pcdh1-203ENSMUST00000160721 F2rP30558 430 aa18.21■□□□□ 0.51
Pcdh1-203ENSMUST00000160721 Mybbp1aQ7TPV4 1344 aaKnown RBP18.21■□□□□ 0.51
Pcdh1-203ENSMUST00000160721 Rbm8a2A0A0N4SUH6 174 aa18.2■□□□□ 0.5
Pcdh1-203ENSMUST00000160721 Prdm11A2AGX3 565 aa18.2■□□□□ 0.5
Pcdh1-203ENSMUST00000160721 Mcmdc2E9Q956 681 aa18.2■□□□□ 0.5
Pcdh1-203ENSMUST00000160721 Kmt5bQ3U8K7 883 aa18.2■□□□□ 0.5
Pcdh1-203ENSMUST00000160721 Cdca8Q8BHX3 289 aa18.2■□□□□ 0.5
Pcdh1-203ENSMUST00000160721 Rbm8aQ9CWZ3 174 aa18.2■□□□□ 0.5
Pcdh1-203ENSMUST00000160721 Zbtb43Q9DAI4 467 aa18.2■□□□□ 0.5
Pcdh1-203ENSMUST00000160721 Gm10093D3YYI8 482 aa18.2■□□□□ 0.5
Pcdh1-203ENSMUST00000160721 Hdac1O09106 482 aaKnown RBP18.2■□□□□ 0.5
Pcdh1-203ENSMUST00000160721 Ier5O89113 308 aa18.2■□□□□ 0.5
Pcdh1-203ENSMUST00000160721 Cyp4f39Q8BGU0 532 aa18.2■□□□□ 0.5
Pcdh1-203ENSMUST00000160721 2310002L09RikQ9D7L5 217 aa18.2■□□□□ 0.5
Pcdh1-203ENSMUST00000160721 Kdm6aO70546 1401 aa18.2■□□□□ 0.5
Pcdh1-203ENSMUST00000160721 Ankrd50F7BE84 1390 aa18.2■□□□□ 0.5
Pcdh1-203ENSMUST00000160721 Olfr247E9PVJ7 320 aa18.2■□□□□ 0.5
Pcdh1-203ENSMUST00000160721 Olfr819K7N727 320 aa18.2■□□□□ 0.5
Pcdh1-203ENSMUST00000160721 Pdia3P27773 505 aaKnown RBP18.2■□□□□ 0.5
Pcdh1-203ENSMUST00000160721 Tyro3P55144 880 aa18.2■□□□□ 0.5
Pcdh1-203ENSMUST00000160721 Ssrp1Q08943 708 aaKnown RBP18.2■□□□□ 0.5
Pcdh1-203ENSMUST00000160721 Ttc14Q9CSP9 761 aa18.2■□□□□ 0.5
Pcdh1-203ENSMUST00000160721 Trpm2Q91YD4 1506 aa18.2■□□□□ 0.5
Pcdh1-203ENSMUST00000160721 Dennd3A2RT67 1274 aa18.2■□□□□ 0.5
Pcdh1-203ENSMUST00000160721 Zbtb45Q52KG4 520 aa18.2■□□□□ 0.5
Pcdh1-203ENSMUST00000160721 Gadd45bP22339 160 aa18.19■□□□□ 0.5
Pcdh1-203ENSMUST00000160721 Timm10P62073 90 aa18.19■□□□□ 0.5
Pcdh1-203ENSMUST00000160721 Gpr162Q3UN16 588 aa18.19■□□□□ 0.5
Pcdh1-203ENSMUST00000160721 Ift88Q61371 824 aa18.19■□□□□ 0.5
Pcdh1-203ENSMUST00000160721 LifrP42703 1092 aa18.19■□□□□ 0.5
Pcdh1-203ENSMUST00000160721 Gm21985Q6P6P5 1106 aa18.19■□□□□ 0.5
Pcdh1-203ENSMUST00000160721 Mrps27Q8BK72 415 aaKnown RBP18.19■□□□□ 0.5
Pcdh1-203ENSMUST00000160721 DymQ8CHY3 669 aa18.19■□□□□ 0.5
Pcdh1-203ENSMUST00000160721 Anxa1P10107 346 aaKnown RBP18.19■□□□□ 0.5
Pcdh1-203ENSMUST00000160721 Vgll3P85442 326 aa18.19■□□□□ 0.5
Pcdh1-203ENSMUST00000160721 Paip2Q9D6V8 124 aa18.19■□□□□ 0.5
Pcdh1-203ENSMUST00000160721 Kif2aP28740 705 aa18.19■□□□□ 0.5
Pcdh1-203ENSMUST00000160721 L1td1Q587J6 782 aaKnown RBP18.19■□□□□ 0.5
Pcdh1-203ENSMUST00000160721 Matr3Q8K310 846 aaKnown RBP18.19■□□□□ 0.5
Pcdh1-203ENSMUST00000160721 Uchl5Q9WUP7 329 aa18.19■□□□□ 0.5
Pcdh1-203ENSMUST00000160721 Mroh2aD3Z750 1679 aa18.18■□□□□ 0.5
Pcdh1-203ENSMUST00000160721 Myl3P09542 204 aa18.18■□□□□ 0.5
Retrieved 100 of 22,080 RNA–protein pairs in 60.5 ms