RNA–Protein interactions for RNA: ENSMUST00000119896.1

Ssr3-202, Transcript of Translocon-associated protein subunit gamma, mousemouse

TSL 1 (best) BASIC

Gene Ssr3, Length 1,469 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr3-202ENSMUST00000119896 Smc4Q8CG47 1286 aa11.67□□□□□ -0.54
Ssr3-202ENSMUST00000119896 RragcQ99K70 398 aa11.67□□□□□ -0.54
Ssr3-202ENSMUST00000119896 Aldh1b1Q9CZS1 519 aa11.67□□□□□ -0.54
Ssr3-202ENSMUST00000119896 Sh3bp5Q9Z131 463 aa11.67□□□□□ -0.54
Ssr3-202ENSMUST00000119896 Rbbp6P97868 1790 aaKnown RBP11.67□□□□□ -0.54
Ssr3-202ENSMUST00000119896 Tanc1Q0VGY8 1856 aa11.66□□□□□ -0.54
Ssr3-202ENSMUST00000119896 Ifi207E9Q3L4 978 aa11.66□□□□□ -0.54
Ssr3-202ENSMUST00000119896 Grm8P47743 908 aa11.66□□□□□ -0.54
Ssr3-202ENSMUST00000119896 Sez6lQ6P1D5 963 aa11.66□□□□□ -0.54
Ssr3-202ENSMUST00000119896 Sh3bp5lQ99LH9 392 aa11.66□□□□□ -0.54
Ssr3-202ENSMUST00000119896 Osbpl5Q9ER64 874 aa11.66□□□□□ -0.54
Ssr3-202ENSMUST00000119896 Map2k1P31938 393 aa11.65□□□□□ -0.54
Ssr3-202ENSMUST00000119896 Acsl1P41216 699 aa11.65□□□□□ -0.54
Ssr3-202ENSMUST00000119896 Trpv1Q704Y3 839 aa11.65□□□□□ -0.54
Ssr3-202ENSMUST00000119896 Ofd1Q80Z25 1017 aa11.65□□□□□ -0.54
Ssr3-202ENSMUST00000119896 Slc44a4Q91VA1 707 aa11.65□□□□□ -0.54
Ssr3-202ENSMUST00000119896 Fgl2P12804 432 aa11.64□□□□□ -0.55
Ssr3-202ENSMUST00000119896 Gpr182P43142 395 aa11.64□□□□□ -0.55
Ssr3-202ENSMUST00000119896 Tfcp2l1Q3UNW5 479 aa11.64□□□□□ -0.55
Ssr3-202ENSMUST00000119896 Cyp4f37Q3V1F1 546 aa11.64□□□□□ -0.55
Ssr3-202ENSMUST00000119896 Bcs1lQ9CZP5 418 aa11.64□□□□□ -0.55
Ssr3-202ENSMUST00000119896 Plekho1Q9JIY0 408 aa11.64□□□□□ -0.55
Ssr3-202ENSMUST00000119896 B3galt4Q9Z0F0 371 aa11.64□□□□□ -0.55
Ssr3-202ENSMUST00000119896 S1pr4Q9Z0L1 386 aa11.64□□□□□ -0.55
Ssr3-202ENSMUST00000119896 Sik3Q6P4S6 1311 aa11.64□□□□□ -0.55
Ssr3-202ENSMUST00000119896 Prkg1P0C605 671 aa11.63□□□□□ -0.55
Ssr3-202ENSMUST00000119896 Serpinb2P12388 415 aa11.63□□□□□ -0.55
Ssr3-202ENSMUST00000119896 GpkowQ56A08 488 aa11.63□□□□□ -0.55
Ssr3-202ENSMUST00000119896 Slc10a5Q5PT54 434 aa11.63□□□□□ -0.55
Ssr3-202ENSMUST00000119896 Rad21Q61550 635 aaKnown RBP11.63□□□□□ -0.55
Ssr3-202ENSMUST00000119896 Jarid2Q62315 1234 aa11.63□□□□□ -0.55
Ssr3-202ENSMUST00000119896 Sp8Q8BMJ8 486 aa11.63□□□□□ -0.55
Ssr3-202ENSMUST00000119896 MsraQ9D6Y7 233 aa11.63□□□□□ -0.55
Ssr3-202ENSMUST00000119896 Tpx2A2APB8 745 aaKnown RBP11.63□□□□□ -0.55
Ssr3-202ENSMUST00000119896 Ldlrad1D3YYZ1 218 aa11.63□□□□□ -0.55
Ssr3-202ENSMUST00000119896 MycnP03966 462 aaKnown RBP11.63□□□□□ -0.55
Ssr3-202ENSMUST00000119896 GabrdP22933 449 aa11.63□□□□□ -0.55
Ssr3-202ENSMUST00000119896 Nectin2P32507 530 aa11.63□□□□□ -0.55
Ssr3-202ENSMUST00000119896 VgfQ0VGU4 617 aa11.63□□□□□ -0.55
Ssr3-202ENSMUST00000119896 Q3UK37 420 aa11.63□□□□□ -0.55
Ssr3-202ENSMUST00000119896 Mak16Q8BGS0 296 aaKnown RBP11.63□□□□□ -0.55
Ssr3-202ENSMUST00000119896 Ccdc60Q8C4J0 545 aa11.63□□□□□ -0.55
Ssr3-202ENSMUST00000119896 Polr3dQ91WD1 398 aa11.63□□□□□ -0.55
Ssr3-202ENSMUST00000119896 Zbtb3Q91X45 518 aa11.63□□□□□ -0.55
Ssr3-202ENSMUST00000119896 Zbtb12Q9Z150 459 aa11.63□□□□□ -0.55
Ssr3-202ENSMUST00000119896 Scn10aQ6QIY3 1958 aa11.62□□□□□ -0.55
Ssr3-202ENSMUST00000119896 Myo1bP46735 1107 aa11.62□□□□□ -0.55
Ssr3-202ENSMUST00000119896 Spryd7Q3TFQ1 196 aa11.62□□□□□ -0.55
Ssr3-202ENSMUST00000119896 Trmt1Q3TX08 663 aa11.62□□□□□ -0.55
Ssr3-202ENSMUST00000119896 Prl3d2F6R3P9 224 aa11.61□□□□□ -0.55
Ssr3-202ENSMUST00000119896 Slc4a2P13808 1237 aaKnown RBP11.61□□□□□ -0.55
Ssr3-202ENSMUST00000119896 Rhbdl3P58873 404 aa11.61□□□□□ -0.55
Ssr3-202ENSMUST00000119896 Tmco5bQ80X59 307 aa11.61□□□□□ -0.55
Ssr3-202ENSMUST00000119896 Ccdc30Q8BVF4 654 aa11.61□□□□□ -0.55
Ssr3-202ENSMUST00000119896 Ncoa5Q91W39 579 aaKnown RBP11.61□□□□□ -0.55
Ssr3-202ENSMUST00000119896 InsrrQ9WTL4 1300 aa11.6□□□□□ -0.55
Ssr3-202ENSMUST00000119896 Nova2D3YVV7 556 aaKnown RBP11.6□□□□□ -0.55
Ssr3-202ENSMUST00000119896 Arid4aF8VPQ2 1261 aaKnown RBP11.6□□□□□ -0.55
Ssr3-202ENSMUST00000119896 Npr3P70180 536 aa11.6□□□□□ -0.55
Ssr3-202ENSMUST00000119896 Sox10Q04888 466 aa11.6□□□□□ -0.55
Ssr3-202ENSMUST00000119896 Spata18Q0P557 537 aa11.6□□□□□ -0.55
Ssr3-202ENSMUST00000119896 Nlrp9bQ66X22 1003 aa11.6□□□□□ -0.55
Ssr3-202ENSMUST00000119896 Plekhm2Q80TQ5 1018 aa11.6□□□□□ -0.55
Ssr3-202ENSMUST00000119896 Anks4bQ8K3X6 423 aa11.6□□□□□ -0.55
Ssr3-202ENSMUST00000119896 ParvgQ9ERD8 331 aa11.6□□□□□ -0.55
Ssr3-202ENSMUST00000119896 UncxO08934 530 aa11.59□□□□□ -0.55
Ssr3-202ENSMUST00000119896 Ly6dP35459 127 aa11.59□□□□□ -0.55
Ssr3-202ENSMUST00000119896 Tmprss11eQ5S248 423 aa11.59□□□□□ -0.55
Ssr3-202ENSMUST00000119896 Adora1Q60612 326 aa11.59□□□□□ -0.55
Ssr3-202ENSMUST00000119896 Psen2Q61144 448 aa11.59□□□□□ -0.55
Ssr3-202ENSMUST00000119896 Senp5Q6NXL6 749 aa11.59□□□□□ -0.55
Ssr3-202ENSMUST00000119896 Rab3gap1Q80UJ7 981 aa11.59□□□□□ -0.55
Ssr3-202ENSMUST00000119896 Polr3glQ8R0C0 218 aa11.59□□□□□ -0.55
Ssr3-202ENSMUST00000119896 Htra3Q9D236 459 aa11.59□□□□□ -0.55
Ssr3-202ENSMUST00000119896 Trmt44Q9D2Q2 713 aa11.59□□□□□ -0.55
Ssr3-202ENSMUST00000119896 Prr14lE9Q7C4 1971 aa11.59□□□□□ -0.55
Ssr3-202ENSMUST00000119896 Armc3A2AU72 881 aa11.58□□□□□ -0.56
Ssr3-202ENSMUST00000119896 Ftl2P49945 183 aa11.58□□□□□ -0.56
Ssr3-202ENSMUST00000119896 Plekhf1Q3TB82 279 aa11.58□□□□□ -0.56
Ssr3-202ENSMUST00000119896 Ddx49Q4FZF3 480 aaKnown RBP11.58□□□□□ -0.56
Ssr3-202ENSMUST00000119896 Plcd4Q8K3R3 807 aa11.58□□□□□ -0.56
Ssr3-202ENSMUST00000119896 Chmp3Q9CQ10 224 aa11.58□□□□□ -0.56
Ssr3-202ENSMUST00000119896 Ripk4Q9ERK0 786 aa11.58□□□□□ -0.56
Ssr3-202ENSMUST00000119896 Mast3Q3U214 1321 aa11.58□□□□□ -0.56
Ssr3-202ENSMUST00000119896 Nbr1P97432 988 aa11.57□□□□□ -0.56
Ssr3-202ENSMUST00000119896 Clul1Q3ZRW6 464 aa11.57□□□□□ -0.56
Ssr3-202ENSMUST00000119896 Sh2d1b2Q45HK4 132 aa11.57□□□□□ -0.56
Ssr3-202ENSMUST00000119896 MarsQ68FL6 902 aaKnown RBP11.57□□□□□ -0.56
Ssr3-202ENSMUST00000119896 Trnp1Q80ZI1 223 aa11.57□□□□□ -0.56
Ssr3-202ENSMUST00000119896 Ccar1Q8CH18 1146 aaKnown RBP11.57□□□□□ -0.56
Ssr3-202ENSMUST00000119896 H2-Q4Q8HWB2 354 aa11.57□□□□□ -0.56
Ssr3-202ENSMUST00000119896 Sulf1Q8K007 870 aa11.57□□□□□ -0.56
Ssr3-202ENSMUST00000119896 Fam83aQ8K2P2 436 aa11.57□□□□□ -0.56
Ssr3-202ENSMUST00000119896 Eif3aP23116 1344 aaKnown RBP11.57□□□□□ -0.56
Ssr3-202ENSMUST00000119896 G3bp1P97855 465 aaKnown RBP11.57□□□□□ -0.56
Ssr3-202ENSMUST00000119896 Plbd2Q3TCN2 594 aa11.57□□□□□ -0.56
Ssr3-202ENSMUST00000119896 Kansl1lQ5DTI6 991 aa11.57□□□□□ -0.56
Ssr3-202ENSMUST00000119896 Cavin2Q63918 418 aaKnown RBP11.57□□□□□ -0.56
Ssr3-202ENSMUST00000119896 Krt74Q6IFZ9 495 aa11.57□□□□□ -0.56
Ssr3-202ENSMUST00000119896 Ireb2Q811J3 963 aaKnown RBP11.57□□□□□ -0.56
Retrieved 100 of 22,080 RNA–protein pairs in 214.6 ms