RNA–Protein interactions for RNA: ENSMUST00000113690.7

Tpm1-209, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 3 BASIC

Gene Tpm1, Length 2,890 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-209ENSMUST00000113690 BrapQ99MP8 591 aa17.17■□□□□ 0.34
Tpm1-209ENSMUST00000113690 Tcof1O08784 1320 aaKnown RBP17.16■□□□□ 0.34
Tpm1-209ENSMUST00000113690 Mkrn3Q60764 544 aa17.16■□□□□ 0.34
Tpm1-209ENSMUST00000113690 Sec62Q8BU14 398 aaKnown RBP17.16■□□□□ 0.34
Tpm1-209ENSMUST00000113690 Vps33aQ9D2N9 598 aa17.16■□□□□ 0.34
Tpm1-209ENSMUST00000113690 Large1Q9Z1M7 756 aa17.16■□□□□ 0.34
Tpm1-209ENSMUST00000113690 Vmn2r23E9PXI5 849 aa17.16■□□□□ 0.34
Tpm1-209ENSMUST00000113690 Iqsec3Q3TES0 1195 aa17.16■□□□□ 0.34
Tpm1-209ENSMUST00000113690 Mei1Q9D4I2 1268 aa17.16■□□□□ 0.34
Tpm1-209ENSMUST00000113690 TefQ9JLC6 301 aa17.16■□□□□ 0.34
Tpm1-209ENSMUST00000113690 Paxbp1P58501 919 aa17.15■□□□□ 0.34
Tpm1-209ENSMUST00000113690 LyarQ08288 388 aaKnown RBP17.15■□□□□ 0.34
Tpm1-209ENSMUST00000113690 Panx2Q6IMP4 677 aa17.15■□□□□ 0.34
Tpm1-209ENSMUST00000113690 Ints4Q8CIM8 964 aa17.15■□□□□ 0.34
Tpm1-209ENSMUST00000113690 Ulbp1Q8HWA3 334 aa17.15■□□□□ 0.34
Tpm1-209ENSMUST00000113690 Arap3Q8R5G7 1538 aa17.15■□□□□ 0.34
Tpm1-209ENSMUST00000113690 Nid2O88322 1403 aa17.15■□□□□ 0.34
Tpm1-209ENSMUST00000113690 Cfap99A0A140LIX9 648 aa17.15■□□□□ 0.34
Tpm1-209ENSMUST00000113690 Fkbp5Q64378 456 aa17.15■□□□□ 0.34
Tpm1-209ENSMUST00000113690 Vps18Q8R307 973 aa17.15■□□□□ 0.34
Tpm1-209ENSMUST00000113690 Zbtb21E9Q444 1094 aa17.14■□□□□ 0.34
Tpm1-209ENSMUST00000113690 Gm29094F6Q785 221 aa17.14■□□□□ 0.34
Tpm1-209ENSMUST00000113690 Ncoa4Q5U4H9 625 aa17.14■□□□□ 0.34
Tpm1-209ENSMUST00000113690 Kcnh5Q920E3 988 aa17.14■□□□□ 0.34
Tpm1-209ENSMUST00000113690 Gigyf1Q99MR1 1044 aaKnown RBP17.14■□□□□ 0.34
Tpm1-209ENSMUST00000113690 Creld2Q9CYA0 350 aa17.14■□□□□ 0.34
Tpm1-209ENSMUST00000113690 MthfsQ9D110 203 aa17.14■□□□□ 0.34
Tpm1-209ENSMUST00000113690 Nfat5Q9WV30 1534 aa17.14■□□□□ 0.34
Tpm1-209ENSMUST00000113690 Gimap6Q8K349 305 aa17.14■□□□□ 0.33
Tpm1-209ENSMUST00000113690 Ddx60E9PZQ1 1711 aa17.14■□□□□ 0.33
Tpm1-209ENSMUST00000113690 Actn3O88990 900 aaKnown RBP17.14■□□□□ 0.33
Tpm1-209ENSMUST00000113690 LtkP08923 888 aa17.14■□□□□ 0.33
Tpm1-209ENSMUST00000113690 Sult6b1P0CC03 303 aa17.14■□□□□ 0.33
Tpm1-209ENSMUST00000113690 CtcfQ61164 736 aaKnown RBP17.14■□□□□ 0.33
Tpm1-209ENSMUST00000113690 Pnpla2Q8BJ56 486 aa17.14■□□□□ 0.33
Tpm1-209ENSMUST00000113690 Zfp202Q8C879 641 aa17.14■□□□□ 0.33
Tpm1-209ENSMUST00000113690 Casz1Q9CWL2 1761 aa17.14■□□□□ 0.33
Tpm1-209ENSMUST00000113690 Slc1a4O35874 532 aa17.13■□□□□ 0.33
Tpm1-209ENSMUST00000113690 Gtpbp6Q3U6U5 514 aa17.13■□□□□ 0.33
Tpm1-209ENSMUST00000113690 Gas2l3Q3UWW6 683 aa17.13■□□□□ 0.33
Tpm1-209ENSMUST00000113690 CerkQ8K4Q7 531 aa17.13■□□□□ 0.33
Tpm1-209ENSMUST00000113690 Arl8aQ8VEH3 186 aa17.13■□□□□ 0.33
Tpm1-209ENSMUST00000113690 Rbm33Q9CXK9 1231 aaKnown RBP17.13■□□□□ 0.33
Tpm1-209ENSMUST00000113690 Stxbp4Q9WV89 557 aa17.13■□□□□ 0.33
Tpm1-209ENSMUST00000113690 C3P01027 1663 aa17.13■□□□□ 0.33
Tpm1-209ENSMUST00000113690 Sptlc2P97363 560 aaKnown RBP17.13■□□□□ 0.33
Tpm1-209ENSMUST00000113690 Kmt5bQ3U8K7 883 aa17.13■□□□□ 0.33
Tpm1-209ENSMUST00000113690 ThemisQ8BGW0 636 aa17.13■□□□□ 0.33
Tpm1-209ENSMUST00000113690 Wdr3Q8BHB4 942 aaKnown RBP17.13■□□□□ 0.33
Tpm1-209ENSMUST00000113690 Zmynd15Q8C0R7 736 aa17.13■□□□□ 0.33
Tpm1-209ENSMUST00000113690 AidaQ8C4Q6 305 aa17.13■□□□□ 0.33
Tpm1-209ENSMUST00000113690 Shisa4Q8CA71 197 aa17.13■□□□□ 0.33
Tpm1-209ENSMUST00000113690 Col15a1O35206 1367 aa17.12■□□□□ 0.33
Tpm1-209ENSMUST00000113690 Gnat3Q3V3I2 354 aa17.12■□□□□ 0.33
Tpm1-209ENSMUST00000113690 Zranb3Q6NZP1 1069 aa17.12■□□□□ 0.33
Tpm1-209ENSMUST00000113690 IncenpQ9WU62 880 aa17.12■□□□□ 0.33
Tpm1-209ENSMUST00000113690 Usp42B2RQC2 1324 aaKnown RBP17.12■□□□□ 0.33
Tpm1-209ENSMUST00000113690 Mcm6P97311 821 aa17.12■□□□□ 0.33
Tpm1-209ENSMUST00000113690 Igflr1Q3U4N7 345 aa17.12■□□□□ 0.33
Tpm1-209ENSMUST00000113690 Lrrc2Q8VDB8 371 aa17.12■□□□□ 0.33
Tpm1-209ENSMUST00000113690 Abcb6Q9DC29 842 aa17.12■□□□□ 0.33
Tpm1-209ENSMUST00000113690 Grin2dQ03391 1323 aa17.12■□□□□ 0.33
Tpm1-209ENSMUST00000113690 AW822073A0A0N4SUK1 652 aa17.11■□□□□ 0.33
Tpm1-209ENSMUST00000113690 Ess2O70279 479 aa17.11■□□□□ 0.33
Tpm1-209ENSMUST00000113690 Ccdc102aQ3TMW1 549 aa17.11■□□□□ 0.33
Tpm1-209ENSMUST00000113690 Atg9aQ68FE2 551 aa17.11■□□□□ 0.33
Tpm1-209ENSMUST00000113690 Dzip1Q8BMD2 852 aa17.11■□□□□ 0.33
Tpm1-209ENSMUST00000113690 Phkg2Q9DB30 406 aa17.11■□□□□ 0.33
Tpm1-209ENSMUST00000113690 Naa16Q9DBB4 864 aa17.11■□□□□ 0.33
Tpm1-209ENSMUST00000113690 Fbxl16A2RT62 479 aa17.11■□□□□ 0.33
Tpm1-209ENSMUST00000113690 Diaph1O08808 1255 aa17.11■□□□□ 0.33
Tpm1-209ENSMUST00000113690 Pfkfb1P70266 471 aa17.11■□□□□ 0.33
Tpm1-209ENSMUST00000113690 Tmem59lQ7TNI2 337 aa17.11■□□□□ 0.33
Tpm1-209ENSMUST00000113690 Atad2Q8CDM1 1040 aa17.11■□□□□ 0.33
Tpm1-209ENSMUST00000113690 Robo1O89026 1612 aa17.11■□□□□ 0.33
Tpm1-209ENSMUST00000113690 Trim25Q61510 634 aaKnown RBP17.11■□□□□ 0.33
Tpm1-209ENSMUST00000113690 Spag5Q7TME2 1165 aa17.11■□□□□ 0.33
Tpm1-209ENSMUST00000113690 Spata32Q8C5V0 334 aa17.11■□□□□ 0.33
Tpm1-209ENSMUST00000113690 Rtel1Q0VGM9 1203 aa17.1■□□□□ 0.33
Tpm1-209ENSMUST00000113690 Acnat2Q8BGG9 420 aa17.1■□□□□ 0.33
Tpm1-209ENSMUST00000113690 Tmc2Q8R4P4 888 aa17.1■□□□□ 0.33
Tpm1-209ENSMUST00000113690 Tmem132aQ922P8 1018 aa17.1■□□□□ 0.33
Tpm1-209ENSMUST00000113690 Uri1Q3TLD5 531 aa17.1■□□□□ 0.33
Tpm1-209ENSMUST00000113690 Tmem87aQ8BXN9 555 aa17.1■□□□□ 0.33
Tpm1-209ENSMUST00000113690 Nop2Q922K7 793 aaKnown RBP17.1■□□□□ 0.33
Tpm1-209ENSMUST00000113690 Acot9Q9R0X4 439 aaKnown RBP17.1■□□□□ 0.33
Tpm1-209ENSMUST00000113690 Rgs12Q8CGE9 1381 aa17.09■□□□□ 0.33
Tpm1-209ENSMUST00000113690 Larp6Q8BN59 492 aa17.09■□□□□ 0.33
Tpm1-209ENSMUST00000113690 Fam53cQ8BXQ8 393 aa17.09■□□□□ 0.33
Tpm1-209ENSMUST00000113690 OptnQ8K3K8 584 aa17.09■□□□□ 0.33
Tpm1-209ENSMUST00000113690 Gtpbp4Q99ME9 634 aaKnown RBP17.09■□□□□ 0.33
Tpm1-209ENSMUST00000113690 NfkbibQ60778 359 aa17.09■□□□□ 0.33
Tpm1-209ENSMUST00000113690 ZyxQ62523 564 aa17.09■□□□□ 0.33
Tpm1-209ENSMUST00000113690 Zbtb40Q6PCS8 1258 aa17.09■□□□□ 0.33
Tpm1-209ENSMUST00000113690 Mical1Q8VDP3 1048 aa17.09■□□□□ 0.33
Tpm1-209ENSMUST00000113690 Gnl2Q99LH1 728 aaKnown RBP17.09■□□□□ 0.33
Tpm1-209ENSMUST00000113690 Prl3d3A0A0M6L0J6 224 aa17.08■□□□□ 0.33
Tpm1-209ENSMUST00000113690 Rec8Q8C5S7 591 aa17.08■□□□□ 0.33
Tpm1-209ENSMUST00000113690 MbipQ99LQ1 341 aa17.08■□□□□ 0.33
Tpm1-209ENSMUST00000113690 Vnn1Q9Z0K8 512 aa17.08■□□□□ 0.33
Retrieved 100 of 22,080 RNA–protein pairs in 13.5 ms