RNA–Protein interactions for RNA: ENSMUST00000062439.4

Ccdc54-201, Transcript of Coiled-coil domain-containing protein 54, mousemouse

APPRIS P1 BASIC

Gene Ccdc54, Length 1,296 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc54-201ENSMUST00000062439 Enc1O35709 589 aa10.76□□□□□ -0.69
Ccdc54-201ENSMUST00000062439 Gsx2P31316 305 aa10.76□□□□□ -0.69
Ccdc54-201ENSMUST00000062439 Ceacam1P31809 521 aa10.76□□□□□ -0.69
Ccdc54-201ENSMUST00000062439 Vipr2P41588 437 aa10.76□□□□□ -0.69
Ccdc54-201ENSMUST00000062439 UtyP79457 1212 aa10.76□□□□□ -0.69
Ccdc54-201ENSMUST00000062439 SfswapQ3USH5 945 aaKnown RBP10.76□□□□□ -0.69
Ccdc54-201ENSMUST00000062439 Kbtbd4Q8R179 534 aa10.76□□□□□ -0.69
Ccdc54-201ENSMUST00000062439 Dact1Q8R4A3 778 aa10.76□□□□□ -0.69
Ccdc54-201ENSMUST00000062439 Mrpl50Q8VDT9 159 aaKnown RBP10.76□□□□□ -0.69
Ccdc54-201ENSMUST00000062439 Ceacam2Q925P2 520 aa10.76□□□□□ -0.69
Ccdc54-201ENSMUST00000062439 PrepQ9QUR6 710 aa10.76□□□□□ -0.69
Ccdc54-201ENSMUST00000062439 2210017I01RikA0A0A6YVV1 95 aa10.75□□□□□ -0.69
Ccdc54-201ENSMUST00000062439 Cdc27A2A6Q5 825 aa10.75□□□□□ -0.69
Ccdc54-201ENSMUST00000062439 Zbtb21E9Q444 1094 aa10.75□□□□□ -0.69
Ccdc54-201ENSMUST00000062439 Msl1Q6PDM1 616 aa10.75□□□□□ -0.69
Ccdc54-201ENSMUST00000062439 Lmod1Q8BVA4 595 aa10.75□□□□□ -0.69
Ccdc54-201ENSMUST00000062439 Gk5Q8BX05 534 aa10.75□□□□□ -0.69
Ccdc54-201ENSMUST00000062439 GmprQ9DCZ1 345 aa10.75□□□□□ -0.69
Ccdc54-201ENSMUST00000062439 TnnQ80Z71 1560 aa10.74□□□□□ -0.69
Ccdc54-201ENSMUST00000062439 ThbdP15306 577 aa10.74□□□□□ -0.69
Ccdc54-201ENSMUST00000062439 Adcy6Q01341 1165 aa10.74□□□□□ -0.69
Ccdc54-201ENSMUST00000062439 Tomm22Q9CPQ3 142 aa10.74□□□□□ -0.69
Ccdc54-201ENSMUST00000062439 H2-BlV9GXR0 257 aa10.74□□□□□ -0.69
Ccdc54-201ENSMUST00000062439 Tnks2Q3UES3 1166 aa10.73□□□□□ -0.69
Ccdc54-201ENSMUST00000062439 Ppp1r26Q6A025 1163 aa10.73□□□□□ -0.69
Ccdc54-201ENSMUST00000062439 Znf18Q810A1 556 aa10.73□□□□□ -0.69
Ccdc54-201ENSMUST00000062439 Fbxl13Q8CDU4 790 aa10.73□□□□□ -0.69
Ccdc54-201ENSMUST00000062439 Adam33Q923W9 797 aa10.73□□□□□ -0.69
Ccdc54-201ENSMUST00000062439 Tas1r3Q925D8 858 aa10.73□□□□□ -0.69
Ccdc54-201ENSMUST00000062439 Kcnh4A2A5F7 1018 aa10.72□□□□□ -0.69
Ccdc54-201ENSMUST00000062439 Fpr-rs4A4FUQ5 323 aa10.72□□□□□ -0.69
Ccdc54-201ENSMUST00000062439 SelenovD3YXG1 328 aa10.72□□□□□ -0.69
Ccdc54-201ENSMUST00000062439 Ncam1P13595 1115 aa10.72□□□□□ -0.69
Ccdc54-201ENSMUST00000062439 Eif2ak2Q03963 515 aaKnown RBP10.72□□□□□ -0.69
Ccdc54-201ENSMUST00000062439 Ccdc129Q14B48 1034 aa10.72□□□□□ -0.69
Ccdc54-201ENSMUST00000062439 Znf697Q569E7 569 aa10.72□□□□□ -0.69
Ccdc54-201ENSMUST00000062439 Safb2Q80YR5 991 aaKnown RBP10.72□□□□□ -0.69
Ccdc54-201ENSMUST00000062439 Ccdc9bA3KGF9 545 aa10.71□□□□□ -0.69
Ccdc54-201ENSMUST00000062439 Pax1P09084 446 aa10.71□□□□□ -0.69
Ccdc54-201ENSMUST00000062439 Pde6bP23440 856 aa10.71□□□□□ -0.69
Ccdc54-201ENSMUST00000062439 Laptm4aQ60961 233 aa10.71□□□□□ -0.69
Ccdc54-201ENSMUST00000062439 Trim46Q7TNM2 759 aa10.71□□□□□ -0.69
Ccdc54-201ENSMUST00000062439 Rxfp4Q7TQP4 414 aa10.71□□□□□ -0.69
Ccdc54-201ENSMUST00000062439 Fgd2Q8BY35 655 aa10.71□□□□□ -0.69
Ccdc54-201ENSMUST00000062439 Tmem39aQ9CYC3 486 aa10.71□□□□□ -0.69
Ccdc54-201ENSMUST00000062439 Golga3P55937 1487 aa10.7□□□□□ -0.7
Ccdc54-201ENSMUST00000062439 Ppp2r3aB2RXC8 1150 aa10.7□□□□□ -0.7
Ccdc54-201ENSMUST00000062439 Ly6c1P0CW02 131 aa10.7□□□□□ -0.7
Ccdc54-201ENSMUST00000062439 Ly6c2P0CW03 131 aa10.7□□□□□ -0.7
Ccdc54-201ENSMUST00000062439 Ppp1r15aP17564 657 aa10.7□□□□□ -0.7
Ccdc54-201ENSMUST00000062439 Sox1P53783 391 aa10.7□□□□□ -0.7
Ccdc54-201ENSMUST00000062439 Nacc1Q7TSZ8 514 aa10.7□□□□□ -0.7
Ccdc54-201ENSMUST00000062439 Tmem106cQ80VP8 260 aa10.7□□□□□ -0.7
Ccdc54-201ENSMUST00000062439 Sec16bQ91XT4 1051 aa10.7□□□□□ -0.7
Ccdc54-201ENSMUST00000062439 Krtap4-2B1AQ85 167 aa10.69□□□□□ -0.7
Ccdc54-201ENSMUST00000062439 Gm8334F7CD45 553 aa10.69□□□□□ -0.7
Ccdc54-201ENSMUST00000062439 Ppm1jQ149T7 507 aa10.69□□□□□ -0.7
Ccdc54-201ENSMUST00000062439 Gm10735Q3US96 136 aa10.69□□□□□ -0.7
Ccdc54-201ENSMUST00000062439 BC080695Q66JY9 481 aa10.69□□□□□ -0.7
Ccdc54-201ENSMUST00000062439 CilpQ66K08 1184 aa10.69□□□□□ -0.7
Ccdc54-201ENSMUST00000062439 Pcdhb14Q6PB90 796 aa10.69□□□□□ -0.7
Ccdc54-201ENSMUST00000062439 Sept6Q9R1T4 434 aa10.69□□□□□ -0.7
Ccdc54-201ENSMUST00000062439 Cntnap5aQ0V8T9 1304 aa10.68□□□□□ -0.7
Ccdc54-201ENSMUST00000062439 Gstp2P46425 210 aa10.68□□□□□ -0.7
Ccdc54-201ENSMUST00000062439 Samm50Q8BGH2 469 aa10.68□□□□□ -0.7
Ccdc54-201ENSMUST00000062439 Sh3bp5lQ99LH9 392 aa10.68□□□□□ -0.7
Ccdc54-201ENSMUST00000062439 AdmP97297 184 aa10.67□□□□□ -0.7
Ccdc54-201ENSMUST00000062439 TfrcQ62351 763 aaKnown RBP10.67□□□□□ -0.7
Ccdc54-201ENSMUST00000062439 Gimap8Q75N62 688 aa10.67□□□□□ -0.7
Ccdc54-201ENSMUST00000062439 Hid1Q8R1F6 788 aa10.67□□□□□ -0.7
Ccdc54-201ENSMUST00000062439 RhovQ8VDU1 236 aa10.67□□□□□ -0.7
Ccdc54-201ENSMUST00000062439 Eif4a3Q91VC3 411 aaKnown RBP10.67□□□□□ -0.7
Ccdc54-201ENSMUST00000062439 SdhbQ9CQA3 282 aa10.67□□□□□ -0.7
Ccdc54-201ENSMUST00000062439 FtmtQ9D5H4 237 aa10.67□□□□□ -0.7
Ccdc54-201ENSMUST00000062439 TesminQ9WTJ6 475 aa10.67□□□□□ -0.7
Ccdc54-201ENSMUST00000062439 Eif4g3Q80XI3 1579 aaKnown RBP10.67□□□□□ -0.7
Ccdc54-201ENSMUST00000062439 Ttll10A4Q9F3 704 aa10.66□□□□□ -0.7
Ccdc54-201ENSMUST00000062439 4930523C07RikE9Q2T4 99 aa10.66□□□□□ -0.7
Ccdc54-201ENSMUST00000062439 Nell2Q61220 819 aa10.66□□□□□ -0.7
Ccdc54-201ENSMUST00000062439 Ovch2Q7M761 609 aa10.66□□□□□ -0.7
Ccdc54-201ENSMUST00000062439 Nlrp10Q8CCN1 673 aa10.66□□□□□ -0.7
Ccdc54-201ENSMUST00000062439 Kiaa0319lQ8K135 1048 aa10.66□□□□□ -0.7
Ccdc54-201ENSMUST00000062439 CerkQ8K4Q7 531 aa10.66□□□□□ -0.7
Ccdc54-201ENSMUST00000062439 Hs2st1Q8R3H7 356 aa10.66□□□□□ -0.7
Ccdc54-201ENSMUST00000062439 Vstm5Q9D806 199 aa10.66□□□□□ -0.7
Ccdc54-201ENSMUST00000062439 Cep164Q5DU05 1446 aa10.66□□□□□ -0.7
Ccdc54-201ENSMUST00000062439 Sbk2P0C5K1 362 aa10.65□□□□□ -0.7
Ccdc54-201ENSMUST00000062439 Scg5P12961 212 aa10.65□□□□□ -0.7
Ccdc54-201ENSMUST00000062439 Rps26P62855 115 aaKnown RBP10.65□□□□□ -0.7
Ccdc54-201ENSMUST00000062439 Slc39a7Q31125 476 aa10.65□□□□□ -0.7
Ccdc54-201ENSMUST00000062439 ZufspQ3T9Z9 577 aa10.65□□□□□ -0.7
Ccdc54-201ENSMUST00000062439 MENTQ569E4 350 aa10.65□□□□□ -0.7
Ccdc54-201ENSMUST00000062439 Slc10a6Q9CXB2 373 aa10.65□□□□□ -0.7
Ccdc54-201ENSMUST00000062439 Q9DAE7 121 aa10.65□□□□□ -0.7
Ccdc54-201ENSMUST00000062439 Ybx3Q9JKB3 361 aaKnown RBP10.65□□□□□ -0.7
Ccdc54-201ENSMUST00000062439 Mapk7Q9WVS8 806 aa10.65□□□□□ -0.7
Ccdc54-201ENSMUST00000062439 Camsap1A2AHC3 1581 aa10.65□□□□□ -0.71
Ccdc54-201ENSMUST00000062439 Ccdc18Q640L5 1455 aa10.64□□□□□ -0.71
Ccdc54-201ENSMUST00000062439 Cntn3Q07409 1028 aa10.64□□□□□ -0.71
Ccdc54-201ENSMUST00000062439 Tctn2Q2MV57 700 aa10.64□□□□□ -0.71
Retrieved 100 of 22,080 RNA–protein pairs in 17.7 ms