RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Gm29094F6Q785 221 aa11.28□□□□□ -0.6
Pcdh1-201ENSMUST00000057185 Oxsr1Q6P9R2 527 aa11.28□□□□□ -0.6
Pcdh1-201ENSMUST00000057185 Cnot6lQ8VEG6 555 aa11.28□□□□□ -0.6
Pcdh1-201ENSMUST00000057185 StrbpQ91WM1 672 aaKnown RBP11.28□□□□□ -0.6
Pcdh1-201ENSMUST00000057185 Nip7Q9CXK8 180 aaKnown RBP11.28□□□□□ -0.6
Pcdh1-201ENSMUST00000057185 MthfsQ9D110 203 aa11.28□□□□□ -0.6
Pcdh1-201ENSMUST00000057185 Sptlc2P97363 560 aaKnown RBP11.28□□□□□ -0.6
Pcdh1-201ENSMUST00000057185 Dnaaf4Q8R368 420 aa11.28□□□□□ -0.6
Pcdh1-201ENSMUST00000057185 Krt82Q99M74 516 aa11.28□□□□□ -0.6
Pcdh1-201ENSMUST00000057185 Prl3d3A0A0M6L0J6 224 aa11.28□□□□□ -0.6
Pcdh1-201ENSMUST00000057185 Fbln2P37889 1221 aa11.28□□□□□ -0.6
Pcdh1-201ENSMUST00000057185 Lins1Q3U1D0 764 aa11.28□□□□□ -0.6
Pcdh1-201ENSMUST00000057185 Tbc1d31Q6NXY1 996 aa11.28□□□□□ -0.6
Pcdh1-201ENSMUST00000057185 Kcnf1Q7TSH7 493 aa11.28□□□□□ -0.6
Pcdh1-201ENSMUST00000057185 Dmrt2Q8BG36 561 aa11.28□□□□□ -0.6
Pcdh1-201ENSMUST00000057185 Zfp317Q8C0Q5 607 aa11.28□□□□□ -0.6
Pcdh1-201ENSMUST00000057185 CenpqQ9CPQ5 267 aa11.28□□□□□ -0.6
Pcdh1-201ENSMUST00000057185 SelenooQ9DBC0 667 aa11.28□□□□□ -0.6
Pcdh1-201ENSMUST00000057185 Uri1Q3TLD5 531 aa11.27□□□□□ -0.6
Pcdh1-201ENSMUST00000057185 Zfp397Q7TNK4 527 aa11.27□□□□□ -0.6
Pcdh1-201ENSMUST00000057185 Dhx30Q99PU8 1217 aaKnown RBP11.27□□□□□ -0.6
Pcdh1-201ENSMUST00000057185 Camta1A2A891 1682 aa11.27□□□□□ -0.61
Pcdh1-201ENSMUST00000057185 TbcaP48428 108 aaKnown RBP11.27□□□□□ -0.61
Pcdh1-201ENSMUST00000057185 Ccdc129Q14B48 1034 aa11.27□□□□□ -0.61
Pcdh1-201ENSMUST00000057185 Tmco3Q8BH01 678 aa11.27□□□□□ -0.61
Pcdh1-201ENSMUST00000057185 Frat2Q8K025 231 aa11.27□□□□□ -0.61
Pcdh1-201ENSMUST00000057185 Vps16Q920Q4 839 aa11.27□□□□□ -0.61
Pcdh1-201ENSMUST00000057185 BrapQ99MP8 591 aa11.27□□□□□ -0.61
Pcdh1-201ENSMUST00000057185 Acot9Q9R0X4 439 aaKnown RBP11.27□□□□□ -0.61
Pcdh1-201ENSMUST00000057185 Metap2O08663 478 aaKnown RBP11.27□□□□□ -0.61
Pcdh1-201ENSMUST00000057185 TnksQ6PFX9 1320 aa11.27□□□□□ -0.61
Pcdh1-201ENSMUST00000057185 Col15a1O35206 1367 aa11.26□□□□□ -0.61
Pcdh1-201ENSMUST00000057185 Clec11aO88200 328 aa11.26□□□□□ -0.61
Pcdh1-201ENSMUST00000057185 Anp32eP97822 260 aaKnown RBP11.26□□□□□ -0.61
Pcdh1-201ENSMUST00000057185 Znf568E9PYI1 671 aa11.26□□□□□ -0.61
Pcdh1-201ENSMUST00000057185 Trim56Q80VI1 734 aaKnown RBP11.26□□□□□ -0.61
Pcdh1-201ENSMUST00000057185 Adamtsl3G3UXC7 1706 aa11.26□□□□□ -0.61
Pcdh1-201ENSMUST00000057185 Tbc1d4Q8BYJ6 1307 aa11.26□□□□□ -0.61
Pcdh1-201ENSMUST00000057185 Fam213aQ9CYH2 218 aa11.26□□□□□ -0.61
Pcdh1-201ENSMUST00000057185 Col4a3bpQ9EQG9 624 aa11.26□□□□□ -0.61
Pcdh1-201ENSMUST00000057185 Elf2Q9JHC9 593 aa11.26□□□□□ -0.61
Pcdh1-201ENSMUST00000057185 Col16a1Q8BLX7 1580 aa11.26□□□□□ -0.61
Pcdh1-201ENSMUST00000057185 Ubr1O70481 1757 aa11.25□□□□□ -0.61
Pcdh1-201ENSMUST00000057185 Qtrt2B8ZXI1 415 aa11.25□□□□□ -0.61
Pcdh1-201ENSMUST00000057185 NapbP28663 298 aa11.25□□□□□ -0.61
Pcdh1-201ENSMUST00000057185 Ankrd40Q5SUE8 363 aa11.25□□□□□ -0.61
Pcdh1-201ENSMUST00000057185 Kcnk13Q8R1P5 405 aa11.25□□□□□ -0.61
Pcdh1-201ENSMUST00000057185 Pdia6Q922R8 440 aaKnown RBP11.25□□□□□ -0.61
Pcdh1-201ENSMUST00000057185 Krt84Q99M73 603 aa11.25□□□□□ -0.61
Pcdh1-201ENSMUST00000057185 Iqca1Q9CUL5 857 aa11.25□□□□□ -0.61
Pcdh1-201ENSMUST00000057185 Serpinb6bO08804 377 aa11.25□□□□□ -0.61
Pcdh1-201ENSMUST00000057185 Hspd1P63038 573 aaKnown RBP11.25□□□□□ -0.61
Pcdh1-201ENSMUST00000057185 Spag5Q7TME2 1165 aa11.25□□□□□ -0.61
Pcdh1-201ENSMUST00000057185 Smim5Q8BT42 78 aa11.25□□□□□ -0.61
Pcdh1-201ENSMUST00000057185 Kcnq3Q8K3F6 873 aa11.25□□□□□ -0.61
Pcdh1-201ENSMUST00000057185 Ncoa5Q91W39 579 aaKnown RBP11.25□□□□□ -0.61
Pcdh1-201ENSMUST00000057185 Flt4P35917 1363 aa11.25□□□□□ -0.61
Pcdh1-201ENSMUST00000057185 Mcm6P97311 821 aa11.25□□□□□ -0.61
Pcdh1-201ENSMUST00000057185 Atp2b3Q0VF55 1220 aa11.25□□□□□ -0.61
Pcdh1-201ENSMUST00000057185 Kiaa0753Q6A000 959 aa11.25□□□□□ -0.61
Pcdh1-201ENSMUST00000057185 Q8BZJ8 459 aa11.25□□□□□ -0.61
Pcdh1-201ENSMUST00000057185 Rbm19Q8R3C6 952 aaKnown RBP11.25□□□□□ -0.61
Pcdh1-201ENSMUST00000057185 Xpo4Q9ESJ0 1151 aa11.25□□□□□ -0.61
Pcdh1-201ENSMUST00000057185 InsrrQ9WTL4 1300 aa11.24□□□□□ -0.61
Pcdh1-201ENSMUST00000057185 Ppp4r3aQ6P2K6 820 aa11.24□□□□□ -0.61
Pcdh1-201ENSMUST00000057185 Zbtb40Q6PCS8 1258 aa11.24□□□□□ -0.61
Pcdh1-201ENSMUST00000057185 Cdca8Q8BHX3 289 aa11.24□□□□□ -0.61
Pcdh1-201ENSMUST00000057185 Ttc27Q8CD92 847 aa11.24□□□□□ -0.61
Pcdh1-201ENSMUST00000057185 Nlrp3Q8R4B8 1033 aa11.24□□□□□ -0.61
Pcdh1-201ENSMUST00000057185 Hps3Q91VB4 1002 aa11.24□□□□□ -0.61
Pcdh1-201ENSMUST00000057185 Clic4Q9QYB1 253 aa11.24□□□□□ -0.61
Pcdh1-201ENSMUST00000057185 Atp12aQ9Z1W8 1035 aa11.24□□□□□ -0.61
Pcdh1-201ENSMUST00000057185 Simc1E9Q6E9 1354 aa11.24□□□□□ -0.61
Pcdh1-201ENSMUST00000057185 Eya2O08575 532 aa11.24□□□□□ -0.61
Pcdh1-201ENSMUST00000057185 Paxbp1P58501 919 aa11.24□□□□□ -0.61
Pcdh1-201ENSMUST00000057185 Tmem266Q8BZB3 538 aa11.24□□□□□ -0.61
Pcdh1-201ENSMUST00000057185 MypnQ5DTJ9 1315 aa11.24□□□□□ -0.61
Pcdh1-201ENSMUST00000057185 Dapk3O54784 448 aa11.24□□□□□ -0.61
Pcdh1-201ENSMUST00000057185 Ripor2Q80U16 1078 aa11.24□□□□□ -0.61
Pcdh1-201ENSMUST00000057185 ZgpatQ8VDM1 511 aa11.24□□□□□ -0.61
Pcdh1-201ENSMUST00000057185 Pik3ap1Q9EQ32 811 aa11.24□□□□□ -0.61
Pcdh1-201ENSMUST00000057185 Pik3c2aQ61194 1686 aa11.24□□□□□ -0.61
Pcdh1-201ENSMUST00000057185 TrdnE9Q9K5 693 aa11.23□□□□□ -0.61
Pcdh1-201ENSMUST00000057185 Samsn1P57725 372 aa11.23□□□□□ -0.61
Pcdh1-201ENSMUST00000057185 Scaf1Q5U4C3 1256 aaKnown RBP11.23□□□□□ -0.61
Pcdh1-201ENSMUST00000057185 Pram1Q6BCL1 675 aa11.23□□□□□ -0.61
Pcdh1-201ENSMUST00000057185 Lrrc8aQ80WG5 810 aa11.23□□□□□ -0.61
Pcdh1-201ENSMUST00000057185 Ubxn10Q8BG34 277 aa11.23□□□□□ -0.61
Pcdh1-201ENSMUST00000057185 Ppm1mQ8BU27 406 aa11.23□□□□□ -0.61
Pcdh1-201ENSMUST00000057185 Zbtb43Q9DAI4 467 aa11.23□□□□□ -0.61
Pcdh1-201ENSMUST00000057185 Mst1rQ62190 1378 aa11.23□□□□□ -0.61
Pcdh1-201ENSMUST00000057185 Cdkl5Q3UTQ8 938 aa11.23□□□□□ -0.61
Pcdh1-201ENSMUST00000057185 Fam193aQ8CGI1 1231 aaKnown RBP11.23□□□□□ -0.61
Pcdh1-201ENSMUST00000057185 Jakmip2D3YXK0 820 aa11.23□□□□□ -0.61
Pcdh1-201ENSMUST00000057185 Trim34bJ3QNR8 485 aa11.23□□□□□ -0.61
Pcdh1-201ENSMUST00000057185 Gng11P61953 73 aa11.23□□□□□ -0.61
Pcdh1-201ENSMUST00000057185 Znhit6Q3UFB2 460 aaKnown RBP11.23□□□□□ -0.61
Pcdh1-201ENSMUST00000057185 Pla2g4fQ50L41 855 aa11.23□□□□□ -0.61
Pcdh1-201ENSMUST00000057185 Cyp7a1Q64505 503 aa11.23□□□□□ -0.61
Pcdh1-201ENSMUST00000057185 Ift122Q6NWV3 1182 aa11.23□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 15 ms