RNA–Protein interactions for RNA: ENSMUST00000050178.12

Ccdc60-201, Transcript of Coiled-coil domain-containing protein 60, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc60, Length 3,522 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60-201ENSMUST00000050178 Tmem59lQ7TNI2 337 aa9.47□□□□□ -0.89
Ccdc60-201ENSMUST00000050178 Zscan22Q8BGS5 496 aa9.47□□□□□ -0.89
Ccdc60-201ENSMUST00000050178 Aknad1E9Q8N6 675 aa9.47□□□□□ -0.89
Ccdc60-201ENSMUST00000050178 Stat1P42225 749 aa9.47□□□□□ -0.89
Ccdc60-201ENSMUST00000050178 Ddb1Q3U1J4 1140 aaKnown RBP9.47□□□□□ -0.89
Ccdc60-201ENSMUST00000050178 Itga6Q61739 1091 aa9.47□□□□□ -0.89
Ccdc60-201ENSMUST00000050178 Esco1Q69Z69 843 aa9.47□□□□□ -0.89
Ccdc60-201ENSMUST00000050178 Golim4Q8BXA1 655 aa9.47□□□□□ -0.89
Ccdc60-201ENSMUST00000050178 Riok1Q922Q2 567 aa9.47□□□□□ -0.89
Ccdc60-201ENSMUST00000050178 Cd22P35329 862 aa9.46□□□□□ -0.89
Ccdc60-201ENSMUST00000050178 Ppp6r1Q7TSI3 856 aa9.46□□□□□ -0.89
Ccdc60-201ENSMUST00000050178 Tulp1Q9Z273 543 aa9.46□□□□□ -0.89
Ccdc60-201ENSMUST00000050178 CpdO89001 1377 aa9.46□□□□□ -0.89
Ccdc60-201ENSMUST00000050178 Pnpla6Q3TRM4 1355 aa9.46□□□□□ -0.89
Ccdc60-201ENSMUST00000050178 Ecm29Q6PDI5 1840 aa9.46□□□□□ -0.89
Ccdc60-201ENSMUST00000050178 Zfp646Q6NV66 1788 aa9.46□□□□□ -0.9
Ccdc60-201ENSMUST00000050178 Cyp3a59D3Z2W7 503 aa9.46□□□□□ -0.9
Ccdc60-201ENSMUST00000050178 Trim56Q80VI1 734 aaKnown RBP9.46□□□□□ -0.9
Ccdc60-201ENSMUST00000050178 Me3Q8BMF3 604 aa9.46□□□□□ -0.9
Ccdc60-201ENSMUST00000050178 InhbeO08717 350 aa9.45□□□□□ -0.9
Ccdc60-201ENSMUST00000050178 Afg3l2Q8JZQ2 802 aaKnown RBP9.45□□□□□ -0.9
Ccdc60-201ENSMUST00000050178 Smc3Q9CW03 1217 aaKnown RBP9.45□□□□□ -0.9
Ccdc60-201ENSMUST00000050178 GakQ99KY4 1305 aa9.45□□□□□ -0.9
Ccdc60-201ENSMUST00000050178 Neurod6P48986 337 aa9.45□□□□□ -0.9
Ccdc60-201ENSMUST00000050178 Snrpa1P57784 255 aaKnown RBP9.45□□□□□ -0.9
Ccdc60-201ENSMUST00000050178 Atp2b3Q0VF55 1220 aa9.45□□□□□ -0.9
Ccdc60-201ENSMUST00000050178 Nlrp9aQ66X03 949 aa9.45□□□□□ -0.9
Ccdc60-201ENSMUST00000050178 Gm21985Q6P6P5 1106 aa9.45□□□□□ -0.9
Ccdc60-201ENSMUST00000050178 Adam1bQ8R534 806 aa9.45□□□□□ -0.9
Ccdc60-201ENSMUST00000050178 NaspQ99MD9 773 aaKnown RBP9.45□□□□□ -0.9
Ccdc60-201ENSMUST00000050178 Med4Q9CQA5 270 aa9.45□□□□□ -0.9
Ccdc60-201ENSMUST00000050178 Gas1Q01721 343 aa9.45□□□□□ -0.9
Ccdc60-201ENSMUST00000050178 Adam1aQ60813 791 aa9.45□□□□□ -0.9
Ccdc60-201ENSMUST00000050178 Ttc19Q8CC21 365 aa9.45□□□□□ -0.9
Ccdc60-201ENSMUST00000050178 Plcd1Q8R3B1 756 aa9.45□□□□□ -0.9
Ccdc60-201ENSMUST00000050178 Cep57l1Q8VDS7 400 aa9.45□□□□□ -0.9
Ccdc60-201ENSMUST00000050178 Wdr24Q8CFJ9 790 aa9.44□□□□□ -0.9
Ccdc60-201ENSMUST00000050178 Ubn2Q80WC1 1314 aa9.44□□□□□ -0.9
Ccdc60-201ENSMUST00000050178 Ltbp2O08999 1813 aa9.44□□□□□ -0.9
Ccdc60-201ENSMUST00000050178 Pcdhb9E9Q5G2 828 aa9.44□□□□□ -0.9
Ccdc60-201ENSMUST00000050178 Gtf3c3Q3TMP1 882 aa9.44□□□□□ -0.9
Ccdc60-201ENSMUST00000050178 Zfp317Q8C0Q5 607 aa9.44□□□□□ -0.9
Ccdc60-201ENSMUST00000050178 Ttc27Q8CD92 847 aa9.44□□□□□ -0.9
Ccdc60-201ENSMUST00000050178 Rbm17Q8JZX4 405 aaKnown RBP9.44□□□□□ -0.9
Ccdc60-201ENSMUST00000050178 IncenpQ9WU62 880 aa9.44□□□□□ -0.9
Ccdc60-201ENSMUST00000050178 Peak1Q69Z38 1735 aa9.44□□□□□ -0.9
Ccdc60-201ENSMUST00000050178 NesQ6P5H2 1864 aaKnown RBP9.44□□□□□ -0.9
Ccdc60-201ENSMUST00000050178 AppP12023 770 aa9.44□□□□□ -0.9
Ccdc60-201ENSMUST00000050178 Tmed8Q3UHI4 326 aa9.44□□□□□ -0.9
Ccdc60-201ENSMUST00000050178 Ckap2Q3V1H1 664 aa9.44□□□□□ -0.9
Ccdc60-201ENSMUST00000050178 PogkQ80TC5 607 aa9.44□□□□□ -0.9
Ccdc60-201ENSMUST00000050178 Ube3cQ80U95 1083 aa9.44□□□□□ -0.9
Ccdc60-201ENSMUST00000050178 Ccdc158Q8CDI6 1109 aa9.44□□□□□ -0.9
Ccdc60-201ENSMUST00000050178 Ccdc178Q8CDV0 866 aa9.44□□□□□ -0.9
Ccdc60-201ENSMUST00000050178 Kiaa0319lQ8K135 1048 aa9.44□□□□□ -0.9
Ccdc60-201ENSMUST00000050178 Sh3bp5lQ99LH9 392 aa9.44□□□□□ -0.9
Ccdc60-201ENSMUST00000050178 Trip6Q9Z1Y4 480 aa9.44□□□□□ -0.9
Ccdc60-201ENSMUST00000050178 TicrrQ8BQ33 1889 aa9.43□□□□□ -0.9
Ccdc60-201ENSMUST00000050178 Ube4aE9Q735 1028 aa9.43□□□□□ -0.9
Ccdc60-201ENSMUST00000050178 GabrdP22933 449 aa9.43□□□□□ -0.9
Ccdc60-201ENSMUST00000050178 Kif4P33174 1231 aa9.43□□□□□ -0.9
Ccdc60-201ENSMUST00000050178 Siah1aP61092 282 aa9.43□□□□□ -0.9
Ccdc60-201ENSMUST00000050178 Slfnl1Q8BHW9 410 aa9.43□□□□□ -0.9
Ccdc60-201ENSMUST00000050178 Mknk2Q8CDB0 459 aa9.43□□□□□ -0.9
Ccdc60-201ENSMUST00000050178 Alg3Q8K2A8 438 aa9.43□□□□□ -0.9
Ccdc60-201ENSMUST00000050178 GptQ8QZR5 496 aa9.43□□□□□ -0.9
Ccdc60-201ENSMUST00000050178 Telo2Q9DC40 840 aaKnown RBP9.43□□□□□ -0.9
Ccdc60-201ENSMUST00000050178 Mroh6V9GX81 722 aa9.43□□□□□ -0.9
Ccdc60-201ENSMUST00000050178 Ccng2O08918 344 aa9.43□□□□□ -0.9
Ccdc60-201ENSMUST00000050178 F2rP30558 430 aa9.43□□□□□ -0.9
Ccdc60-201ENSMUST00000050178 Zfp51Q3U4L8 781 aa9.43□□□□□ -0.9
Ccdc60-201ENSMUST00000050178 Cpa2Q504N0 417 aa9.43□□□□□ -0.9
Ccdc60-201ENSMUST00000050178 VmacQ8BP01 174 aa9.43□□□□□ -0.9
Ccdc60-201ENSMUST00000050178 Pcdhb22Q91XZ8 794 aa9.43□□□□□ -0.9
Ccdc60-201ENSMUST00000050178 Rapgef4Q9EQZ6 1011 aa9.43□□□□□ -0.9
Ccdc60-201ENSMUST00000050178 Med23Q80YQ2 1367 aa9.43□□□□□ -0.9
Ccdc60-201ENSMUST00000050178 Naaladl2A0A0N4SUJ3 795 aa9.43□□□□□ -0.9
Ccdc60-201ENSMUST00000050178 Rhbdl3P58873 404 aa9.43□□□□□ -0.9
Ccdc60-201ENSMUST00000050178 Slc39a11Q8BWY7 342 aa9.43□□□□□ -0.9
Ccdc60-201ENSMUST00000050178 AidaQ8C4Q6 305 aa9.43□□□□□ -0.9
Ccdc60-201ENSMUST00000050178 Sirt2Q8VDQ8 389 aa9.43□□□□□ -0.9
Ccdc60-201ENSMUST00000050178 Plekho1Q9JIY0 408 aa9.43□□□□□ -0.9
Ccdc60-201ENSMUST00000050178 Add3Q9QYB5 706 aaKnown RBP9.43□□□□□ -0.9
Ccdc60-201ENSMUST00000050178 Zswim8Q3UHH1 1832 aaKnown RBP9.43□□□□□ -0.9
Ccdc60-201ENSMUST00000050178 Csrnp1P59054 583 aa9.42□□□□□ -0.9
Ccdc60-201ENSMUST00000050178 Slc5a4bQ91ZP4 660 aa9.42□□□□□ -0.9
Ccdc60-201ENSMUST00000050178 Emilin1Q99K41 1017 aa9.42□□□□□ -0.9
Ccdc60-201ENSMUST00000050178 Pla2g12bQ99P27 195 aa9.42□□□□□ -0.9
Ccdc60-201ENSMUST00000050178 Irgm2A0A140LIF8 407 aa9.42□□□□□ -0.9
Ccdc60-201ENSMUST00000050178 Trim34bJ3QNR8 485 aa9.42□□□□□ -0.9
Ccdc60-201ENSMUST00000050178 Lins1Q3U1D0 764 aa9.42□□□□□ -0.9
Ccdc60-201ENSMUST00000050178 Esyt1Q3U7R1 1092 aaKnown RBP9.42□□□□□ -0.9
Ccdc60-201ENSMUST00000050178 Ddx54Q8K4L0 874 aaKnown RBP9.42□□□□□ -0.9
Ccdc60-201ENSMUST00000050178 Fam184aE9PW83 1143 aa9.42□□□□□ -0.9
Ccdc60-201ENSMUST00000050178 MecomP14404 1042 aa9.42□□□□□ -0.9
Ccdc60-201ENSMUST00000050178 Mtx1P47802 317 aa9.42□□□□□ -0.9
Ccdc60-201ENSMUST00000050178 Tsr2Q8C8T8 191 aa9.42□□□□□ -0.9
Ccdc60-201ENSMUST00000050178 Srgap1Q91Z69 1062 aa9.42□□□□□ -0.9
Ccdc60-201ENSMUST00000050178 Fam84aQ9D650 292 aa9.42□□□□□ -0.9
Ccdc60-201ENSMUST00000050178 Ccdc6D3YZP9 469 aa9.41□□□□□ -0.9
Retrieved 100 of 22,080 RNA–protein pairs in 52.7 ms