RNA–Protein interactions for RNA: ENSMUST00000033378.12

Ebf3-201, Transcript of Transcription factor COE3, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ebf3, Length 4,838 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-201ENSMUST00000033378 Astn2Q80Z10 1352 aa21■□□□□ 0.95
Ebf3-201ENSMUST00000033378 1700006A11RikB9EHI3 544 aa20.99■□□□□ 0.95
Ebf3-201ENSMUST00000033378 Homer1Q9Z2Y3 366 aa20.99■□□□□ 0.95
Ebf3-201ENSMUST00000033378 Pde4dQ01063 747 aa20.99■□□□□ 0.95
Ebf3-201ENSMUST00000033378 Nip7Q9CXK8 180 aaKnown RBP20.99■□□□□ 0.95
Ebf3-201ENSMUST00000033378 Fam213aQ9CYH2 218 aa20.99■□□□□ 0.95
Ebf3-201ENSMUST00000033378 4930548H24RikQ9D496 437 aa20.99■□□□□ 0.95
Ebf3-201ENSMUST00000033378 Zfp91Q62511 572 aa20.99■□□□□ 0.95
Ebf3-201ENSMUST00000033378 Wdr3Q8BHB4 942 aaKnown RBP20.99■□□□□ 0.95
Ebf3-201ENSMUST00000033378 Xpo4Q9ESJ0 1151 aa20.99■□□□□ 0.95
Ebf3-201ENSMUST00000033378 Cetn2Q9R1K9 172 aa20.99■□□□□ 0.95
Ebf3-201ENSMUST00000033378 Btn2a2A4QPC6 514 aa20.99■□□□□ 0.95
Ebf3-201ENSMUST00000033378 Ctnnbl1Q9CWL8 563 aaKnown RBP20.99■□□□□ 0.95
Ebf3-201ENSMUST00000033378 Nop53Q8BK35 484 aaKnown RBP20.98■□□□□ 0.95
Ebf3-201ENSMUST00000033378 Nop2Q922K7 793 aaKnown RBP20.98■□□□□ 0.95
Ebf3-201ENSMUST00000033378 Gm29094F6Q785 221 aa20.98■□□□□ 0.95
Ebf3-201ENSMUST00000033378 Ifit1bl2Q3U687 466 aa20.98■□□□□ 0.95
Ebf3-201ENSMUST00000033378 Gm28047Q3US59 414 aa20.98■□□□□ 0.95
Ebf3-201ENSMUST00000033378 Ccdc57Q6PHN1 1016 aa20.98■□□□□ 0.95
Ebf3-201ENSMUST00000033378 Farp2Q91VS8 1065 aa20.98■□□□□ 0.95
Ebf3-201ENSMUST00000033378 MthfsQ9D110 203 aa20.98■□□□□ 0.95
Ebf3-201ENSMUST00000033378 Vwa3bJ9JI28 736 aa20.98■□□□□ 0.95
Ebf3-201ENSMUST00000033378 Zfp202Q8C879 641 aa20.98■□□□□ 0.95
Ebf3-201ENSMUST00000033378 Gm10378F6XQQ1 160 aa20.98■□□□□ 0.95
Ebf3-201ENSMUST00000033378 Slc1a4O35874 532 aa20.98■□□□□ 0.95
Ebf3-201ENSMUST00000033378 Tab2Q99K90 693 aa20.98■□□□□ 0.95
Ebf3-201ENSMUST00000033378 Lztfl1Q9JHQ5 299 aa20.98■□□□□ 0.95
Ebf3-201ENSMUST00000033378 SsbP32067 415 aaKnown RBP20.97■□□□□ 0.95
Ebf3-201ENSMUST00000033378 Igbp1Q61249 340 aa20.97■□□□□ 0.95
Ebf3-201ENSMUST00000033378 Asic1Q6NXK8 526 aa20.97■□□□□ 0.95
Ebf3-201ENSMUST00000033378 Kcnh3Q9WVJ0 1095 aa20.97■□□□□ 0.95
Ebf3-201ENSMUST00000033378 Cacna2d4Q5RJF7 1116 aa20.97■□□□□ 0.95
Ebf3-201ENSMUST00000033378 Snd1Q78PY7 910 aaKnown RBP20.97■□□□□ 0.95
Ebf3-201ENSMUST00000033378 MarcksP26645 309 aaKnown RBP20.97■□□□□ 0.95
Ebf3-201ENSMUST00000033378 Tcp11l1Q8BTG3 509 aa20.97■□□□□ 0.95
Ebf3-201ENSMUST00000033378 Hs2st1Q8R3H7 356 aa20.97■□□□□ 0.95
Ebf3-201ENSMUST00000033378 AlkP97793 1621 aa20.97■□□□□ 0.95
Ebf3-201ENSMUST00000033378 Sdad1Q80UZ2 687 aaKnown RBP20.97■□□□□ 0.95
Ebf3-201ENSMUST00000033378 Atp2b1G5E829 1220 aa20.96■□□□□ 0.95
Ebf3-201ENSMUST00000033378 Ms4a1P19437 291 aa20.96■□□□□ 0.95
Ebf3-201ENSMUST00000033378 Cdca7lQ922M5 438 aa20.96■□□□□ 0.95
Ebf3-201ENSMUST00000033378 SympkQ80X82 1284 aa20.96■□□□□ 0.95
Ebf3-201ENSMUST00000033378 Slc39a6Q8C145 765 aa20.95■□□□□ 0.95
Ebf3-201ENSMUST00000033378 Gm28510A0A087WP28 240 aa20.95■□□□□ 0.94
Ebf3-201ENSMUST00000033378 Me3Q8BMF3 604 aa20.95■□□□□ 0.94
Ebf3-201ENSMUST00000033378 DlatQ8BMF4 642 aa20.95■□□□□ 0.94
Ebf3-201ENSMUST00000033378 Ncaph2Q8BSP2 607 aa20.95■□□□□ 0.94
Ebf3-201ENSMUST00000033378 Myl3P09542 204 aa20.95■□□□□ 0.94
Ebf3-201ENSMUST00000033378 Ifit1Q64282 463 aa20.95■□□□□ 0.94
Ebf3-201ENSMUST00000033378 Krt79Q8VED5 531 aa20.95■□□□□ 0.94
Ebf3-201ENSMUST00000033378 Bmp2kQ91Z96 1138 aa20.95■□□□□ 0.94
Ebf3-201ENSMUST00000033378 Prrc2bQ7TPM1 1486 aaKnown RBP20.95■□□□□ 0.94
Ebf3-201ENSMUST00000033378 Rps6ka5Q8C050 863 aa20.94■□□□□ 0.94
Ebf3-201ENSMUST00000033378 2310002L09RikQ9D7L5 217 aa20.94■□□□□ 0.94
Ebf3-201ENSMUST00000033378 Specc1lQ2KN98 1118 aaKnown RBP20.94■□□□□ 0.94
Ebf3-201ENSMUST00000033378 Prkab2Q6PAM0 271 aa20.94■□□□□ 0.94
Ebf3-201ENSMUST00000033378 RarsQ9D0I9 660 aaKnown RBP20.94■□□□□ 0.94
Ebf3-201ENSMUST00000033378 Diaph1O08808 1255 aa20.94■□□□□ 0.94
Ebf3-201ENSMUST00000033378 Gas8Q60779 478 aa20.94■□□□□ 0.94
Ebf3-201ENSMUST00000033378 9230110C19RikQ8CC70 267 aa20.94■□□□□ 0.94
Ebf3-201ENSMUST00000033378 Akr1c19G3X9Y6 323 aa20.93■□□□□ 0.94
Ebf3-201ENSMUST00000033378 Hoxc9P09633 260 aa20.93■□□□□ 0.94
Ebf3-201ENSMUST00000033378 Prdm1Q60636 856 aa20.93■□□□□ 0.94
Ebf3-201ENSMUST00000033378 Smarcc2Q6PDG5 1213 aa20.93■□□□□ 0.94
Ebf3-201ENSMUST00000033378 Ttc27Q8CD92 847 aa20.93■□□□□ 0.94
Ebf3-201ENSMUST00000033378 Ubxn1Q922Y1 297 aa20.93■□□□□ 0.94
Ebf3-201ENSMUST00000033378 Prl7a2O54831 253 aa20.93■□□□□ 0.94
Ebf3-201ENSMUST00000033378 Pla2g4fQ50L41 855 aa20.93■□□□□ 0.94
Ebf3-201ENSMUST00000033378 Asic3Q6X1Y6 530 aa20.93■□□□□ 0.94
Ebf3-201ENSMUST00000033378 Sgsm2Q80U12 1005 aa20.93■□□□□ 0.94
Ebf3-201ENSMUST00000033378 Prm3Q62100 101 aa20.93■□□□□ 0.94
Ebf3-201ENSMUST00000033378 Gtf3c5Q8R2T8 520 aa20.93■□□□□ 0.94
Ebf3-201ENSMUST00000033378 Tmem143Q8VD26 458 aa20.93■□□□□ 0.94
Ebf3-201ENSMUST00000033378 Prl3d3A0A0M6L0J6 224 aa20.93■□□□□ 0.94
Ebf3-201ENSMUST00000033378 Gm5624F6ZZG8 207 aa20.93■□□□□ 0.94
Ebf3-201ENSMUST00000033378 Ttll12Q3UDE2 639 aa20.93■□□□□ 0.94
Ebf3-201ENSMUST00000033378 Golga5Q9QYE6 729 aa20.93■□□□□ 0.94
Ebf3-201ENSMUST00000033378 TnksQ6PFX9 1320 aa20.92■□□□□ 0.94
Ebf3-201ENSMUST00000033378 Usp5P56399 858 aaKnown RBP20.92■□□□□ 0.94
Ebf3-201ENSMUST00000033378 Sh3d21Q7TSG5 549 aa20.92■□□□□ 0.94
Ebf3-201ENSMUST00000033378 Hook3Q8BUK6 718 aa20.92■□□□□ 0.94
Ebf3-201ENSMUST00000033378 Atg3Q9CPX6 314 aa20.92■□□□□ 0.94
Ebf3-201ENSMUST00000033378 Lmo7E9PYF4 1699 aaKnown RBP20.92■□□□□ 0.94
Ebf3-201ENSMUST00000033378 Dnajc25A2ALW5 357 aa20.92■□□□□ 0.94
Ebf3-201ENSMUST00000033378 Gm7347D3YYI9 267 aa20.92■□□□□ 0.94
Ebf3-201ENSMUST00000033378 Myom2Q14BI5 1463 aa20.92■□□□□ 0.94
Ebf3-201ENSMUST00000033378 Chl1P70232 1209 aa20.92■□□□□ 0.94
Ebf3-201ENSMUST00000033378 Pprc1Q6NZN1 1644 aa20.92■□□□□ 0.94
Ebf3-201ENSMUST00000033378 Slc14a2Q8R4T9 930 aa20.92■□□□□ 0.94
Ebf3-201ENSMUST00000033378 NapgQ9CWZ7 312 aa20.92■□□□□ 0.94
Ebf3-201ENSMUST00000033378 Polr2dQ9D7M8 142 aaKnown RBP20.92■□□□□ 0.94
Ebf3-201ENSMUST00000033378 Hmgb1P63158 215 aaKnown RBP20.91■□□□□ 0.94
Ebf3-201ENSMUST00000033378 Abtb2Q7TQI7 1024 aa20.91■□□□□ 0.94
Ebf3-201ENSMUST00000033378 Klc3Q91W40 508 aa20.91■□□□□ 0.94
Ebf3-201ENSMUST00000033378 MycbpapQ5SUV2 932 aa20.91■□□□□ 0.94
Ebf3-201ENSMUST00000033378 Gramd4Q8CB44 633 aa20.91■□□□□ 0.94
Ebf3-201ENSMUST00000033378 Gm1993A6X8I0 212 aa20.91■□□□□ 0.94
Ebf3-201ENSMUST00000033378 SlxD3Z347 212 aa20.91■□□□□ 0.94
Ebf3-201ENSMUST00000033378 E9QMW4 1145 aa20.91■□□□□ 0.94
Ebf3-201ENSMUST00000033378 Spg7Q3ULF4 781 aa20.91■□□□□ 0.94
Retrieved 100 of 22,080 RNA–protein pairs in 8.7 ms