RNA–Protein interactions for RNA: ENSMUST00000033158.5

Ubfd1-201, Transcript of Ubiquitin domain-containing protein UBFD1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubfd1, Length 4,849 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1-201ENSMUST00000033158 Tacc2Q9JJG0 1149 aa18.85■□□□□ 0.61
Ubfd1-201ENSMUST00000033158 E9QMW4 1145 aa18.85■□□□□ 0.61
Ubfd1-201ENSMUST00000033158 Rps6kb1Q8BSK8 525 aa18.85■□□□□ 0.61
Ubfd1-201ENSMUST00000033158 Clip2Q9Z0H8 1047 aa18.85■□□□□ 0.61
Ubfd1-201ENSMUST00000033158 Ccdc162pQ0VG85 912 aa18.85■□□□□ 0.61
Ubfd1-201ENSMUST00000033158 MycbpapQ5SUV2 932 aa18.85■□□□□ 0.61
Ubfd1-201ENSMUST00000033158 Zkscan8Q8BSL0 588 aa18.84■□□□□ 0.61
Ubfd1-201ENSMUST00000033158 Kdm4cQ8VCD7 1054 aa18.84■□□□□ 0.61
Ubfd1-201ENSMUST00000033158 Ppp6r3Q922D4 844 aa18.84■□□□□ 0.61
Ubfd1-201ENSMUST00000033158 Mrps25Q9D125 171 aaKnown RBP18.84■□□□□ 0.61
Ubfd1-201ENSMUST00000033158 Egfl6Q9JJZ5 550 aa18.84■□□□□ 0.61
Ubfd1-201ENSMUST00000033158 Hip1rQ9JKY5 1068 aa18.84■□□□□ 0.61
Ubfd1-201ENSMUST00000033158 HellsQ60848 821 aa18.84■□□□□ 0.61
Ubfd1-201ENSMUST00000033158 AatkQ80YE4 1365 aa18.84■□□□□ 0.61
Ubfd1-201ENSMUST00000033158 Akr1c19G3X9Y6 323 aa18.84■□□□□ 0.61
Ubfd1-201ENSMUST00000033158 Ctdp1Q7TSG2 960 aa18.84■□□□□ 0.61
Ubfd1-201ENSMUST00000033158 Fermt2Q8CIB5 680 aa18.84■□□□□ 0.61
Ubfd1-201ENSMUST00000033158 SfpqQ8VIJ6 699 aaKnown RBP18.84■□□□□ 0.61
Ubfd1-201ENSMUST00000033158 Vps36Q91XD6 386 aa18.84■□□□□ 0.61
Ubfd1-201ENSMUST00000033158 Ginm1Q91WR6 327 aa18.84■□□□□ 0.61
Ubfd1-201ENSMUST00000033158 Hsf2bpQ9D4G2 338 aa18.84■□□□□ 0.61
Ubfd1-201ENSMUST00000033158 Atp2b1G5E829 1220 aa18.83■□□□□ 0.61
Ubfd1-201ENSMUST00000033158 9230110C19RikQ8CC70 267 aa18.83■□□□□ 0.61
Ubfd1-201ENSMUST00000033158 Atg3Q9CPX6 314 aa18.83■□□□□ 0.61
Ubfd1-201ENSMUST00000033158 Gli2Q0VGT2 1544 aa18.83■□□□□ 0.61
Ubfd1-201ENSMUST00000033158 Gna11P21278 359 aa18.83■□□□□ 0.6
Ubfd1-201ENSMUST00000033158 Emilin2Q8K482 1074 aa18.83■□□□□ 0.6
Ubfd1-201ENSMUST00000033158 Gm10378F6XQQ1 160 aa18.83■□□□□ 0.6
Ubfd1-201ENSMUST00000033158 Sult6b1P0CC03 303 aa18.83■□□□□ 0.6
Ubfd1-201ENSMUST00000033158 P4ha1Q60715 534 aa18.83■□□□□ 0.6
Ubfd1-201ENSMUST00000033158 DmtnQ9WV69 405 aa18.83■□□□□ 0.6
Ubfd1-201ENSMUST00000033158 TnnQ80Z71 1560 aa18.83■□□□□ 0.6
Ubfd1-201ENSMUST00000033158 Serpinb6bO08804 377 aa18.83■□□□□ 0.6
Ubfd1-201ENSMUST00000033158 Ano6Q6P9J9 911 aa18.83■□□□□ 0.6
Ubfd1-201ENSMUST00000033158 Tpx2A2APB8 745 aaKnown RBP18.82■□□□□ 0.6
Ubfd1-201ENSMUST00000033158 NmiO35309 314 aa18.82■□□□□ 0.6
Ubfd1-201ENSMUST00000033158 Serpinc1P32261 465 aa18.82■□□□□ 0.6
Ubfd1-201ENSMUST00000033158 Lrrc43Q3V0L5 667 aa18.82■□□□□ 0.6
Ubfd1-201ENSMUST00000033158 Smarcc2Q6PDG5 1213 aa18.82■□□□□ 0.6
Ubfd1-201ENSMUST00000033158 Tsr2Q8C8T8 191 aa18.82■□□□□ 0.6
Ubfd1-201ENSMUST00000033158 Skor1Q8BX46 964 aa18.82■□□□□ 0.6
Ubfd1-201ENSMUST00000033158 Cadps2Q8BYR5 1297 aa18.82■□□□□ 0.6
Ubfd1-201ENSMUST00000033158 Yeats4Q9CR11 227 aaKnown RBP18.82■□□□□ 0.6
Ubfd1-201ENSMUST00000033158 Atg4a-psA0A0G2JFS9 396 aa18.81■□□□□ 0.6
Ubfd1-201ENSMUST00000033158 Tm6sf1P58749 370 aa18.81■□□□□ 0.6
Ubfd1-201ENSMUST00000033158 Kank4Q6P9J5 1016 aa18.81■□□□□ 0.6
Ubfd1-201ENSMUST00000033158 Ncaph2Q8BSP2 607 aa18.81■□□□□ 0.6
Ubfd1-201ENSMUST00000033158 Atg4aQ8C9S8 396 aa18.81■□□□□ 0.6
Ubfd1-201ENSMUST00000033158 Prl3d2F6R3P9 224 aa18.81■□□□□ 0.6
Ubfd1-201ENSMUST00000033158 Itga6Q61739 1091 aa18.81■□□□□ 0.6
Ubfd1-201ENSMUST00000033158 Tmx1Q8VBT0 278 aa18.81■□□□□ 0.6
Ubfd1-201ENSMUST00000033158 Uso1Q9Z1Z0 959 aaKnown RBP18.81■□□□□ 0.6
Ubfd1-201ENSMUST00000033158 Pcdhb22Q91XZ8 794 aa18.81■□□□□ 0.6
Ubfd1-201ENSMUST00000033158 Ubash3aQ3V3E1 624 aa18.81■□□□□ 0.6
Ubfd1-201ENSMUST00000033158 RtcbQ99LF4 505 aaKnown RBP18.81■□□□□ 0.6
Ubfd1-201ENSMUST00000033158 Gm29094F6Q785 221 aa18.8■□□□□ 0.6
Ubfd1-201ENSMUST00000033158 TsksO54887 585 aa18.8■□□□□ 0.6
Ubfd1-201ENSMUST00000033158 Nlrp2Q4PLS0 1046 aaKnown RBP18.8■□□□□ 0.6
Ubfd1-201ENSMUST00000033158 Egfem1Q8C088 590 aa18.8■□□□□ 0.6
Ubfd1-201ENSMUST00000033158 A0A1W2P7S8 802 aa18.8■□□□□ 0.6
Ubfd1-201ENSMUST00000033158 Esco1Q69Z69 843 aa18.8■□□□□ 0.6
Ubfd1-201ENSMUST00000033158 Cdc5lQ6A068 802 aaKnown RBP18.8■□□□□ 0.6
Ubfd1-201ENSMUST00000033158 Phkg2Q9DB30 406 aa18.8■□□□□ 0.6
Ubfd1-201ENSMUST00000033158 Ccdc121E9Q6D3 323 aa18.8■□□□□ 0.6
Ubfd1-201ENSMUST00000033158 Ube3aO08759 870 aa18.8■□□□□ 0.6
Ubfd1-201ENSMUST00000033158 DesP31001 469 aaKnown RBP18.8■□□□□ 0.6
Ubfd1-201ENSMUST00000033158 Cabp5Q9JLK3 173 aa18.8■□□□□ 0.6
Ubfd1-201ENSMUST00000033158 Gm28919A0A087WP35 240 aa18.8■□□□□ 0.6
Ubfd1-201ENSMUST00000033158 SsbP32067 415 aaKnown RBP18.8■□□□□ 0.6
Ubfd1-201ENSMUST00000033158 Frat2Q8K025 231 aa18.8■□□□□ 0.6
Ubfd1-201ENSMUST00000033158 Hdac9Q99N13 588 aa18.8■□□□□ 0.6
Ubfd1-201ENSMUST00000033158 Ccdc105Q9D4K7 499 aa18.8■□□□□ 0.6
Ubfd1-201ENSMUST00000033158 Fam177a1Q8BR63 207 aa18.79■□□□□ 0.6
Ubfd1-201ENSMUST00000033158 Naa16Q9DBB4 864 aa18.79■□□□□ 0.6
Ubfd1-201ENSMUST00000033158 Syce1Q9D495 329 aa18.79■□□□□ 0.6
Ubfd1-201ENSMUST00000033158 Igbp1Q61249 340 aa18.79■□□□□ 0.6
Ubfd1-201ENSMUST00000033158 Tcp11l1Q8BTG3 509 aa18.79■□□□□ 0.6
Ubfd1-201ENSMUST00000033158 Appbp2Q9DAX9 585 aa18.79■□□□□ 0.6
Ubfd1-201ENSMUST00000033158 Znf394Q9Z1D9 521 aa18.79■□□□□ 0.6
Ubfd1-201ENSMUST00000033158 Gm1993A6X8I0 212 aa18.79■□□□□ 0.6
Ubfd1-201ENSMUST00000033158 SlxD3Z347 212 aa18.79■□□□□ 0.6
Ubfd1-201ENSMUST00000033158 Snap23O09044 210 aa18.79■□□□□ 0.6
Ubfd1-201ENSMUST00000033158 Jdp2P97875 163 aa18.78■□□□□ 0.6
Ubfd1-201ENSMUST00000033158 Pex1Q5BL07 1284 aa18.78■□□□□ 0.6
Ubfd1-201ENSMUST00000033158 Lrrc2Q8VDB8 371 aa18.78■□□□□ 0.6
Ubfd1-201ENSMUST00000033158 Atp12aQ9Z1W8 1035 aa18.78■□□□□ 0.6
Ubfd1-201ENSMUST00000033158 Cnksr1A2A9K7 700 aa18.78■□□□□ 0.6
Ubfd1-201ENSMUST00000033158 Znf697Q569E7 569 aa18.78■□□□□ 0.6
Ubfd1-201ENSMUST00000033158 Top1Q04750 767 aaKnown RBP18.78■□□□□ 0.6
Ubfd1-201ENSMUST00000033158 Erbb3Q61526 1339 aa18.78■□□□□ 0.6
Ubfd1-201ENSMUST00000033158 Peg3Q3URU2 1571 aa18.78■□□□□ 0.6
Ubfd1-201ENSMUST00000033158 Gm30191A0A0U1RNT7 187 aa18.77■□□□□ 0.6
Ubfd1-201ENSMUST00000033158 Tagap1P0CAX8 505 aa18.77■□□□□ 0.6
Ubfd1-201ENSMUST00000033158 Fam107bQ3TGF2 131 aa18.77■□□□□ 0.6
Ubfd1-201ENSMUST00000033158 Fgfr1opQ66JX5 399 aa18.77■□□□□ 0.6
Ubfd1-201ENSMUST00000033158 Ccdc148Q6P5U8 527 aa18.77■□□□□ 0.6
Ubfd1-201ENSMUST00000033158 ParnQ8VDG3 624 aa18.77■□□□□ 0.6
Ubfd1-201ENSMUST00000033158 Fez2Q6TYB5 348 aa18.77■□□□□ 0.6
Ubfd1-201ENSMUST00000033158 Podxl2Q8CAE9 603 aa18.77■□□□□ 0.6
Ubfd1-201ENSMUST00000033158 Sh3tc1G3X9F6 1346 aa18.77■□□□□ 0.6
Retrieved 100 of 22,080 RNA–protein pairs in 14.7 ms