RNA–Protein interactions for RNA: ENSMUST00000033088.7

Rnf40-201, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

TSL 5 BASIC

Gene Rnf40, Length 3,906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-201ENSMUST00000033088 Gucy1b3O54865 620 aa12.27□□□□□ -0.45
Rnf40-201ENSMUST00000033088 Cct5P80316 541 aaKnown RBP12.27□□□□□ -0.45
Rnf40-201ENSMUST00000033088 HmmrQ00547 794 aaKnown RBP12.27□□□□□ -0.45
Rnf40-201ENSMUST00000033088 Ccdc162pQ0VG85 912 aa12.27□□□□□ -0.45
Rnf40-201ENSMUST00000033088 Smc4Q8CG47 1286 aa12.27□□□□□ -0.45
Rnf40-201ENSMUST00000033088 Amotl2Q8K371 772 aa12.27□□□□□ -0.45
Rnf40-201ENSMUST00000033088 Mmp8O70138 465 aa12.26□□□□□ -0.45
Rnf40-201ENSMUST00000033088 Lig3P97386 1015 aa12.26□□□□□ -0.45
Rnf40-201ENSMUST00000033088 Lrrfip2Q91WK0 415 aa12.26□□□□□ -0.45
Rnf40-201ENSMUST00000033088 Magi2Q9WVQ1 1275 aa12.26□□□□□ -0.45
Rnf40-201ENSMUST00000033088 Ppp2r3dQ9Z176 491 aa12.26□□□□□ -0.45
Rnf40-201ENSMUST00000033088 Znf335A2A5K6 1337 aa12.26□□□□□ -0.45
Rnf40-201ENSMUST00000033088 Enc1O35709 589 aa12.26□□□□□ -0.45
Rnf40-201ENSMUST00000033088 Leo1Q5XJE5 667 aa12.26□□□□□ -0.45
Rnf40-201ENSMUST00000033088 Prdm1Q60636 856 aa12.26□□□□□ -0.45
Rnf40-201ENSMUST00000033088 Soga3Q6NZL0 945 aa12.26□□□□□ -0.45
Rnf40-201ENSMUST00000033088 Cfap100Q80VN0 613 aa12.26□□□□□ -0.45
Rnf40-201ENSMUST00000033088 Cep55Q8BT07 462 aa12.26□□□□□ -0.45
Rnf40-201ENSMUST00000033088 Gm21671G3UY31 267 aa12.26□□□□□ -0.45
Rnf40-201ENSMUST00000033088 Ier5O89113 308 aa12.26□□□□□ -0.45
Rnf40-201ENSMUST00000033088 Sun3Q5SS91 320 aa12.26□□□□□ -0.45
Rnf40-201ENSMUST00000033088 Lmod1Q8BVA4 595 aa12.26□□□□□ -0.45
Rnf40-201ENSMUST00000033088 Slc39a6Q8C145 765 aa12.26□□□□□ -0.45
Rnf40-201ENSMUST00000033088 Lmbr1lQ9D1E5 489 aa12.26□□□□□ -0.45
Rnf40-201ENSMUST00000033088 Ifi35Q9D8C4 286 aa12.26□□□□□ -0.45
Rnf40-201ENSMUST00000033088 Hip1rQ9JKY5 1068 aa12.26□□□□□ -0.45
Rnf40-201ENSMUST00000033088 Tbc1d2B1AVH7 922 aa12.25□□□□□ -0.45
Rnf40-201ENSMUST00000033088 Oxsr1Q6P9R2 527 aa12.25□□□□□ -0.45
Rnf40-201ENSMUST00000033088 Smarcc2Q6PDG5 1213 aa12.25□□□□□ -0.45
Rnf40-201ENSMUST00000033088 Dhx38Q80X98 1228 aa12.25□□□□□ -0.45
Rnf40-201ENSMUST00000033088 Pdcd6ipQ9WU78 869 aaKnown RBP12.25□□□□□ -0.45
Rnf40-201ENSMUST00000033088 Gm10563F6WIE4 79 aa12.25□□□□□ -0.45
Rnf40-201ENSMUST00000033088 Dmrt2Q8BG36 561 aa12.25□□□□□ -0.45
Rnf40-201ENSMUST00000033088 Mei4Q8BRM6 389 aa12.25□□□□□ -0.45
Rnf40-201ENSMUST00000033088 Rnf34Q99KR6 376 aa12.25□□□□□ -0.45
Rnf40-201ENSMUST00000033088 PdclQ9DBX2 301 aa12.25□□□□□ -0.45
Rnf40-201ENSMUST00000033088 Dapk3O54784 448 aa12.25□□□□□ -0.45
Rnf40-201ENSMUST00000033088 Timm10P62073 90 aa12.25□□□□□ -0.45
Rnf40-201ENSMUST00000033088 Recql4Q75NR7 1216 aaKnown RBP12.25□□□□□ -0.45
Rnf40-201ENSMUST00000033088 Ehd2Q8BH64 543 aa12.25□□□□□ -0.45
Rnf40-201ENSMUST00000033088 Kif2bQ8C0N1 668 aa12.25□□□□□ -0.45
Rnf40-201ENSMUST00000033088 PdiltQ9DAN1 588 aa12.25□□□□□ -0.45
Rnf40-201ENSMUST00000033088 Gm45140A0A0N4SUM8 220 aa12.24□□□□□ -0.45
Rnf40-201ENSMUST00000033088 Kansl3A2RSY1 903 aaKnown RBP12.24□□□□□ -0.45
Rnf40-201ENSMUST00000033088 Hoxb7P09024 217 aa12.24□□□□□ -0.45
Rnf40-201ENSMUST00000033088 Pde11aP0C1Q2 933 aa12.24□□□□□ -0.45
Rnf40-201ENSMUST00000033088 Sptlc2P97363 560 aaKnown RBP12.24□□□□□ -0.45
Rnf40-201ENSMUST00000033088 Ankib1Q6ZPS6 1085 aa12.24□□□□□ -0.45
Rnf40-201ENSMUST00000033088 Rims2Q9EQZ7 1530 aa12.24□□□□□ -0.45
Rnf40-201ENSMUST00000033088 Otud7bB2RUR8 840 aa12.24□□□□□ -0.45
Rnf40-201ENSMUST00000033088 Ccdc24E9PUW8 296 aa12.24□□□□□ -0.45
Rnf40-201ENSMUST00000033088 Skap2Q3UND0 358 aa12.24□□□□□ -0.45
Rnf40-201ENSMUST00000033088 PsapQ61207 557 aaKnown RBP12.24□□□□□ -0.45
Rnf40-201ENSMUST00000033088 Ovgp1Q62010 721 aa12.24□□□□□ -0.45
Rnf40-201ENSMUST00000033088 Q8BZJ8 459 aa12.24□□□□□ -0.45
Rnf40-201ENSMUST00000033088 Rbm17Q8JZX4 405 aaKnown RBP12.24□□□□□ -0.45
Rnf40-201ENSMUST00000033088 Mtmr3Q8K296 1196 aa12.24□□□□□ -0.45
Rnf40-201ENSMUST00000033088 Plcd1Q8R3B1 756 aa12.24□□□□□ -0.45
Rnf40-201ENSMUST00000033088 Fam84aQ9D650 292 aa12.24□□□□□ -0.45
Rnf40-201ENSMUST00000033088 Golga5Q9QYE6 729 aa12.24□□□□□ -0.45
Rnf40-201ENSMUST00000033088 Kif20bQ80WE4 1774 aaKnown RBP12.24□□□□□ -0.45
Rnf40-201ENSMUST00000033088 Ugt1a5B2RT14 529 aa12.24□□□□□ -0.45
Rnf40-201ENSMUST00000033088 Pde6aP27664 859 aa12.24□□□□□ -0.45
Rnf40-201ENSMUST00000033088 Tspyl3Q3UYP3 334 aa12.24□□□□□ -0.45
Rnf40-201ENSMUST00000033088 Snd1Q78PY7 910 aaKnown RBP12.24□□□□□ -0.45
Rnf40-201ENSMUST00000033088 Clic6Q8BHB9 596 aa12.24□□□□□ -0.45
Rnf40-201ENSMUST00000033088 SdsQ8VBT2 327 aa12.24□□□□□ -0.45
Rnf40-201ENSMUST00000033088 Sept14Q9DA97 430 aa12.24□□□□□ -0.45
Rnf40-201ENSMUST00000033088 Rimbp3Q3V0F0 1606 aa12.23□□□□□ -0.45
Rnf40-201ENSMUST00000033088 Pex1Q5BL07 1284 aa12.23□□□□□ -0.45
Rnf40-201ENSMUST00000033088 Ccz1Q8C1Y8 480 aa12.23□□□□□ -0.45
Rnf40-201ENSMUST00000033088 Ccdc43Q9CR29 222 aaKnown RBP12.23□□□□□ -0.45
Rnf40-201ENSMUST00000033088 Tmem94Q7TSH8 1360 aa12.23□□□□□ -0.45
Rnf40-201ENSMUST00000033088 Astn2Q80Z10 1352 aa12.23□□□□□ -0.45
Rnf40-201ENSMUST00000033088 Gm1979E9QAN3 267 aa12.23□□□□□ -0.45
Rnf40-201ENSMUST00000033088 Jade2Q6ZQF7 829 aa12.23□□□□□ -0.45
Rnf40-201ENSMUST00000033088 Prc1Q99K43 603 aaKnown RBP12.23□□□□□ -0.45
Rnf40-201ENSMUST00000033088 Ssr1Q9CY50 286 aaKnown RBP12.23□□□□□ -0.45
Rnf40-201ENSMUST00000033088 D430041D05RikF6ZGR6 1678 aa12.23□□□□□ -0.45
Rnf40-201ENSMUST00000033088 Unc5clQ6R653 518 aa12.23□□□□□ -0.45
Rnf40-201ENSMUST00000033088 Txndc16Q7TN22 820 aa12.23□□□□□ -0.45
Rnf40-201ENSMUST00000033088 Dnm3Q8BZ98 863 aa12.23□□□□□ -0.45
Rnf40-201ENSMUST00000033088 Sos1Q62245 1319 aa12.23□□□□□ -0.45
Rnf40-201ENSMUST00000033088 FanccP50652 591 aa12.22□□□□□ -0.45
Rnf40-201ENSMUST00000033088 Trim28Q62318 834 aa12.22□□□□□ -0.45
Rnf40-201ENSMUST00000033088 1700113H08RikE9Q9Q5 327 aa12.22□□□□□ -0.45
Rnf40-201ENSMUST00000033088 Capn2O08529 700 aa12.22□□□□□ -0.45
Rnf40-201ENSMUST00000033088 Ncapg2Q6DFV1 1138 aa12.22□□□□□ -0.45
Rnf40-201ENSMUST00000033088 Phldb2Q8K1N2 1249 aa12.22□□□□□ -0.45
Rnf40-201ENSMUST00000033088 Trim29Q8R2Q0 587 aa12.22□□□□□ -0.45
Rnf40-201ENSMUST00000033088 Kif1aP33173 1695 aa12.22□□□□□ -0.45
Rnf40-201ENSMUST00000033088 Rad50P70388 1312 aa12.22□□□□□ -0.45
Rnf40-201ENSMUST00000033088 Gm7361D3Z6R1 267 aa12.22□□□□□ -0.45
Rnf40-201ENSMUST00000033088 Hdhd2Q3UGR5 259 aa12.21□□□□□ -0.45
Rnf40-201ENSMUST00000033088 Mctp2Q5RJH2 878 aa12.21□□□□□ -0.45
Rnf40-201ENSMUST00000033088 Noc3lQ8VI84 807 aaKnown RBP12.21□□□□□ -0.45
Rnf40-201ENSMUST00000033088 Ddx41Q91VN6 622 aaKnown RBP12.21□□□□□ -0.45
Rnf40-201ENSMUST00000033088 Ccdc39Q9D5Y1 937 aa12.21□□□□□ -0.45
Rnf40-201ENSMUST00000033088 Osbpl5Q9ER64 874 aa12.21□□□□□ -0.45
Rnf40-201ENSMUST00000033088 Znf521Q6KAS7 1311 aa12.21□□□□□ -0.45
Retrieved 100 of 22,080 RNA–protein pairs in 149.7 ms