RNA–Protein interactions for RNA: ENSMUST00000027988.7

Ccdc3-201, Transcript of Coiled-coil domain-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc3, Length 2,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3-201ENSMUST00000027988 Ccne2Q9Z238 404 aa21.58■■□□□ 1.05
Ccdc3-201ENSMUST00000027988 Tiam2Q6ZPF3 1715 aa21.58■■□□□ 1.05
Ccdc3-201ENSMUST00000027988 Prl3d2F6R3P9 224 aa21.58■■□□□ 1.04
Ccdc3-201ENSMUST00000027988 AidaQ8C4Q6 305 aa21.58■■□□□ 1.04
Ccdc3-201ENSMUST00000027988 Atad2Q8CDM1 1040 aa21.58■■□□□ 1.04
Ccdc3-201ENSMUST00000027988 Gm29094F6Q785 221 aa21.57■■□□□ 1.04
Ccdc3-201ENSMUST00000027988 Cdk4P30285 303 aa21.57■■□□□ 1.04
Ccdc3-201ENSMUST00000027988 Tmem59lQ7TNI2 337 aa21.57■■□□□ 1.04
Ccdc3-201ENSMUST00000027988 Hps3Q91VB4 1002 aa21.57■■□□□ 1.04
Ccdc3-201ENSMUST00000027988 MthfsQ9D110 203 aa21.57■■□□□ 1.04
Ccdc3-201ENSMUST00000027988 Ifi35Q9D8C4 286 aa21.57■■□□□ 1.04
Ccdc3-201ENSMUST00000027988 Pes1Q9EQ61 584 aaKnown RBP21.57■■□□□ 1.04
Ccdc3-201ENSMUST00000027988 TnksQ6PFX9 1320 aa21.57■■□□□ 1.04
Ccdc3-201ENSMUST00000027988 Mrc1Q61830 1456 aa21.57■■□□□ 1.04
Ccdc3-201ENSMUST00000027988 Ccdc112A0AUP1 442 aa21.57■■□□□ 1.04
Ccdc3-201ENSMUST00000027988 Nom1Q3UFM5 854 aaKnown RBP21.57■■□□□ 1.04
Ccdc3-201ENSMUST00000027988 BcanQ61361 883 aa21.57■■□□□ 1.04
Ccdc3-201ENSMUST00000027988 Tnrc6cQ3UHC0 1690 aaKnown RBP21.57■■□□□ 1.04
Ccdc3-201ENSMUST00000027988 MsnP26041 577 aaKnown RBP21.56■■□□□ 1.04
Ccdc3-201ENSMUST00000027988 Hnrnpul1Q8VDM6 859 aaKnown RBP21.56■■□□□ 1.04
Ccdc3-201ENSMUST00000027988 Phlpp1Q8CHE4 1687 aa21.56■■□□□ 1.04
Ccdc3-201ENSMUST00000027988 Sept12Q9D451 317 aa21.56■■□□□ 1.04
Ccdc3-201ENSMUST00000027988 Hook1Q8BIL5 728 aa21.55■■□□□ 1.04
Ccdc3-201ENSMUST00000027988 Rufy2Q8R4C2 606 aa21.55■■□□□ 1.04
Ccdc3-201ENSMUST00000027988 Terf2ipQ91VL8 393 aa21.55■■□□□ 1.04
Ccdc3-201ENSMUST00000027988 Irx4Q9QY61 515 aa21.55■■□□□ 1.04
Ccdc3-201ENSMUST00000027988 Dhx40Q6PE54 779 aaKnown RBP21.55■■□□□ 1.04
Ccdc3-201ENSMUST00000027988 Npc1l1Q6T3U4 1333 aa21.55■■□□□ 1.04
Ccdc3-201ENSMUST00000027988 CebpaP53566 359 aa21.54■■□□□ 1.04
Ccdc3-201ENSMUST00000027988 Fam213aQ9CYH2 218 aa21.54■■□□□ 1.04
Ccdc3-201ENSMUST00000027988 Cap2Q9CYT6 476 aa21.54■■□□□ 1.04
Ccdc3-201ENSMUST00000027988 Hmgn5Q9JL35 406 aa21.54■■□□□ 1.04
Ccdc3-201ENSMUST00000027988 Clic4Q9QYB1 253 aa21.54■■□□□ 1.04
Ccdc3-201ENSMUST00000027988 Clec11aO88200 328 aa21.54■■□□□ 1.04
Ccdc3-201ENSMUST00000027988 Ap5z1Q3U829 807 aa21.54■■□□□ 1.04
Ccdc3-201ENSMUST00000027988 Dnaaf2Q8BPI1 814 aa21.53■■□□□ 1.04
Ccdc3-201ENSMUST00000027988 Acsbg1Q99PU5 721 aa21.53■■□□□ 1.04
Ccdc3-201ENSMUST00000027988 Col4a3bpQ9EQG9 624 aa21.53■■□□□ 1.04
Ccdc3-201ENSMUST00000027988 Card6E9PWH2 1175 aa21.53■■□□□ 1.04
Ccdc3-201ENSMUST00000027988 XpcP51612 930 aa21.53■■□□□ 1.04
Ccdc3-201ENSMUST00000027988 Atp2b3Q0VF55 1220 aa21.53■■□□□ 1.04
Ccdc3-201ENSMUST00000027988 Map10Q8BJS7 891 aa21.53■■□□□ 1.04
Ccdc3-201ENSMUST00000027988 Kcnk13Q8R1P5 405 aa21.53■■□□□ 1.04
Ccdc3-201ENSMUST00000027988 Cyp2d9P11714 504 aa21.52■■□□□ 1.04
Ccdc3-201ENSMUST00000027988 Gsdma2Q32M21 443 aa21.52■■□□□ 1.04
Ccdc3-201ENSMUST00000027988 Rdm1Q9CQK3 281 aa21.52■■□□□ 1.04
Ccdc3-201ENSMUST00000027988 Ehd4Q9EQP2 541 aa21.52■■□□□ 1.04
Ccdc3-201ENSMUST00000027988 Edrf1Q6GQV7 1239 aa21.52■■□□□ 1.04
Ccdc3-201ENSMUST00000027988 Ube2oQ6ZPJ3 1288 aa21.52■■□□□ 1.04
Ccdc3-201ENSMUST00000027988 SdsQ8VBT2 327 aa21.52■■□□□ 1.04
Ccdc3-201ENSMUST00000027988 Ythdc1E9Q5K9 736 aaKnown RBP21.52■■□□□ 1.03
Ccdc3-201ENSMUST00000027988 Trim30aP15533 496 aa21.52■■□□□ 1.03
Ccdc3-201ENSMUST00000027988 Tpm3P21107 285 aaKnown RBP21.52■■□□□ 1.03
Ccdc3-201ENSMUST00000027988 TfrcQ62351 763 aaKnown RBP21.52■■□□□ 1.03
Ccdc3-201ENSMUST00000027988 Ncaph2Q8BSP2 607 aa21.52■■□□□ 1.03
Ccdc3-201ENSMUST00000027988 CerkQ8K4Q7 531 aa21.52■■□□□ 1.03
Ccdc3-201ENSMUST00000027988 Lekr1B2RVN1 116 aa21.51■■□□□ 1.03
Ccdc3-201ENSMUST00000027988 Cyp3a57D3YYZ0 503 aa21.51■■□□□ 1.03
Ccdc3-201ENSMUST00000027988 Rrp1P56183 494 aaKnown RBP21.51■■□□□ 1.03
Ccdc3-201ENSMUST00000027988 Pald1P70261 859 aa21.51■■□□□ 1.03
Ccdc3-201ENSMUST00000027988 Sass6Q80UK7 654 aa21.51■■□□□ 1.03
Ccdc3-201ENSMUST00000027988 U2af1l4Q8BGJ9 220 aa21.51■■□□□ 1.03
Ccdc3-201ENSMUST00000027988 Tmem266Q8BZB3 538 aa21.51■■□□□ 1.03
Ccdc3-201ENSMUST00000027988 GptQ8QZR5 496 aa21.51■■□□□ 1.03
Ccdc3-201ENSMUST00000027988 Zfp251Q6PCX8 632 aa21.5■■□□□ 1.03
Ccdc3-201ENSMUST00000027988 Frmd3Q8BHD4 595 aa21.5■■□□□ 1.03
Ccdc3-201ENSMUST00000027988 Gm973E9Q295 1059 aa21.5■■□□□ 1.03
Ccdc3-201ENSMUST00000027988 Stx1aO35526 288 aa21.5■■□□□ 1.03
Ccdc3-201ENSMUST00000027988 Ehd2Q8BH64 543 aa21.5■■□□□ 1.03
Ccdc3-201ENSMUST00000027988 Sec62Q8BU14 398 aaKnown RBP21.5■■□□□ 1.03
Ccdc3-201ENSMUST00000027988 Emilin1Q99K41 1017 aa21.5■■□□□ 1.03
Ccdc3-201ENSMUST00000027988 Ccer1Q9CQL2 403 aa21.5■■□□□ 1.03
Ccdc3-201ENSMUST00000027988 Ccdc94Q9D6J3 314 aa21.5■■□□□ 1.03
Ccdc3-201ENSMUST00000027988 Fam13bQ8K2H3 851 aa21.49■■□□□ 1.03
Ccdc3-201ENSMUST00000027988 Gpr182P43142 395 aa21.49■■□□□ 1.03
Ccdc3-201ENSMUST00000027988 Acap3Q6NXL5 833 aa21.49■■□□□ 1.03
Ccdc3-201ENSMUST00000027988 Lrrc8aQ80WG5 810 aa21.49■■□□□ 1.03
Ccdc3-201ENSMUST00000027988 Clca2Q8BG22 942 aa21.49■■□□□ 1.03
Ccdc3-201ENSMUST00000027988 Ciao1Q99KN2 339 aa21.49■■□□□ 1.03
Ccdc3-201ENSMUST00000027988 Ubn2Q80WC1 1314 aa21.48■■□□□ 1.03
Ccdc3-201ENSMUST00000027988 Cyp19a1P28649 503 aa21.48■■□□□ 1.03
Ccdc3-201ENSMUST00000027988 Ftl2P49945 183 aa21.48■■□□□ 1.03
Ccdc3-201ENSMUST00000027988 Prdm1Q60636 856 aa21.48■■□□□ 1.03
Ccdc3-201ENSMUST00000027988 Gpatch3Q8BIY1 525 aa21.48■■□□□ 1.03
Ccdc3-201ENSMUST00000027988 Zkscan8Q8BSL0 588 aa21.48■■□□□ 1.03
Ccdc3-201ENSMUST00000027988 Sik3Q6P4S6 1311 aa21.48■■□□□ 1.03
Ccdc3-201ENSMUST00000027988 Sall1Q9ER74 1322 aa21.48■■□□□ 1.03
Ccdc3-201ENSMUST00000027988 Cbx1P83917 185 aaKnown RBP21.48■■□□□ 1.03
Ccdc3-201ENSMUST00000027988 LyarQ08288 388 aaKnown RBP21.48■■□□□ 1.03
Ccdc3-201ENSMUST00000027988 Gm12185Q5NCB2 835 aa21.48■■□□□ 1.03
Ccdc3-201ENSMUST00000027988 Ubxn4Q8VCH8 506 aa21.48■■□□□ 1.03
Ccdc3-201ENSMUST00000027988 Shank3Q4ACU6 1730 aa21.48■■□□□ 1.03
Ccdc3-201ENSMUST00000027988 Bcl9lQ67FY2 1494 aa21.47■■□□□ 1.03
Ccdc3-201ENSMUST00000027988 Bin1O08539 588 aaKnown RBP21.47■■□□□ 1.03
Ccdc3-201ENSMUST00000027988 Cdkn1cP49919 348 aa21.47■■□□□ 1.03
Ccdc3-201ENSMUST00000027988 Llgl2Q3TJ91 1027 aa21.47■■□□□ 1.03
Ccdc3-201ENSMUST00000027988 Tbc1d7Q9D0K0 293 aa21.47■■□□□ 1.03
Ccdc3-201ENSMUST00000027988 Pde3aQ9Z0X4 1141 aa21.47■■□□□ 1.03
Ccdc3-201ENSMUST00000027988 TsksO54887 585 aa21.46■■□□□ 1.03
Ccdc3-201ENSMUST00000027988 RdxP26043 583 aaKnown RBP21.46■■□□□ 1.03
Retrieved 100 of 22,080 RNA–protein pairs in 83.4 ms