RNA–Protein interactions for RNA: ENSMUST00000023123.14

Col2a1-201, Transcript of Collagen alpha-1(II) chain, mousemouse

TSL 1 (best) BASIC

Gene Col2a1, Length 5,104 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1-201ENSMUST00000023123 Elf2Q9JHC9 593 aa17.21■□□□□ 0.34
Col2a1-201ENSMUST00000023123 Rrp1P56183 494 aaKnown RBP17.2■□□□□ 0.34
Col2a1-201ENSMUST00000023123 Matr3Q8K310 846 aaKnown RBP17.2■□□□□ 0.34
Col2a1-201ENSMUST00000023123 Calm1P0DP26 149 aaKnown RBP17.2■□□□□ 0.34
Col2a1-201ENSMUST00000023123 Calm2P0DP27 149 aaKnown RBP17.2■□□□□ 0.34
Col2a1-201ENSMUST00000023123 Calm3P0DP28 149 aaKnown RBP17.2■□□□□ 0.34
Col2a1-201ENSMUST00000023123 Rtn1Q8K0T0 780 aa17.2■□□□□ 0.34
Col2a1-201ENSMUST00000023123 Ppp6r3Q922D4 844 aa17.2■□□□□ 0.34
Col2a1-201ENSMUST00000023123 Rapgef6Q5NCJ1 1609 aa17.2■□□□□ 0.34
Col2a1-201ENSMUST00000023123 Eif4g1Q6NZJ6 1600 aaKnown RBP17.2■□□□□ 0.34
Col2a1-201ENSMUST00000023123 Slc4a4O88343 1079 aa17.2■□□□□ 0.34
Col2a1-201ENSMUST00000023123 Cdr2P97817 455 aa17.2■□□□□ 0.34
Col2a1-201ENSMUST00000023123 Ccdc157Q5SPX1 718 aa17.2■□□□□ 0.34
Col2a1-201ENSMUST00000023123 Snd1Q78PY7 910 aaKnown RBP17.2■□□□□ 0.34
Col2a1-201ENSMUST00000023123 GckrQ91X44 587 aa17.2■□□□□ 0.34
Col2a1-201ENSMUST00000023123 Rlbp1Q9Z275 317 aa17.2■□□□□ 0.34
Col2a1-201ENSMUST00000023123 Ubash3aQ3V3E1 624 aa17.2■□□□□ 0.34
Col2a1-201ENSMUST00000023123 Ublcp1Q8BGR9 318 aa17.2■□□□□ 0.34
Col2a1-201ENSMUST00000023123 Usp5P56399 858 aaKnown RBP17.19■□□□□ 0.34
Col2a1-201ENSMUST00000023123 OvosQ3UU35 1456 aa17.19■□□□□ 0.34
Col2a1-201ENSMUST00000023123 Gm156Q58A37 223 aa17.19■□□□□ 0.34
Col2a1-201ENSMUST00000023123 Sec62Q8BU14 398 aaKnown RBP17.19■□□□□ 0.34
Col2a1-201ENSMUST00000023123 Rsrc1Q9DBU6 334 aa17.19■□□□□ 0.34
Col2a1-201ENSMUST00000023123 Osbpl5Q9ER64 874 aa17.19■□□□□ 0.34
Col2a1-201ENSMUST00000023123 WizO88286 1684 aaKnown RBP17.19■□□□□ 0.34
Col2a1-201ENSMUST00000023123 Aox1O54754 1333 aa17.19■□□□□ 0.34
Col2a1-201ENSMUST00000023123 Mmp8O70138 465 aa17.19■□□□□ 0.34
Col2a1-201ENSMUST00000023123 Wdhd1P59328 1117 aa17.19■□□□□ 0.34
Col2a1-201ENSMUST00000023123 BC005561E9Q5E2 1589 aa17.19■□□□□ 0.34
Col2a1-201ENSMUST00000023123 Rps6kb1Q8BSK8 525 aa17.19■□□□□ 0.34
Col2a1-201ENSMUST00000023123 Lztfl1Q9JHQ5 299 aa17.19■□□□□ 0.34
Col2a1-201ENSMUST00000023123 Cpsf1Q9EPU4 1441 aaKnown RBP17.18■□□□□ 0.34
Col2a1-201ENSMUST00000023123 VimP20152 466 aaKnown RBP17.18■□□□□ 0.34
Col2a1-201ENSMUST00000023123 Tcp11l1Q8BTG3 509 aa17.18■□□□□ 0.34
Col2a1-201ENSMUST00000023123 Fermt2Q8CIB5 680 aa17.18■□□□□ 0.34
Col2a1-201ENSMUST00000023123 PpanQ91YU8 470 aaKnown RBP17.18■□□□□ 0.34
Col2a1-201ENSMUST00000023123 Mcm5P49718 733 aa17.18■□□□□ 0.34
Col2a1-201ENSMUST00000023123 RarsQ9D0I9 660 aaKnown RBP17.18■□□□□ 0.34
Col2a1-201ENSMUST00000023123 Krt8P11679 490 aaKnown RBP17.18■□□□□ 0.34
Col2a1-201ENSMUST00000023123 Psmb7P70195 277 aa17.18■□□□□ 0.34
Col2a1-201ENSMUST00000023123 Ifit1bl2Q3U687 466 aa17.18■□□□□ 0.34
Col2a1-201ENSMUST00000023123 Ndufab1Q9CR21 156 aa17.18■□□□□ 0.34
Col2a1-201ENSMUST00000023123 Armc9Q9D2I5 817 aa17.18■□□□□ 0.34
Col2a1-201ENSMUST00000023123 AdnpQ9Z103 1108 aaKnown RBP17.18■□□□□ 0.34
Col2a1-201ENSMUST00000023123 Btn2a2A4QPC6 514 aa17.18■□□□□ 0.34
Col2a1-201ENSMUST00000023123 Epb41l2O70318 988 aaKnown RBP17.18■□□□□ 0.34
Col2a1-201ENSMUST00000023123 Usp37Q8C0R0 979 aa17.18■□□□□ 0.34
Col2a1-201ENSMUST00000023123 Frmpd2A0A140LI67 1392 aa17.17■□□□□ 0.34
Col2a1-201ENSMUST00000023123 Ccdc152E9PX14 254 aa17.17■□□□□ 0.34
Col2a1-201ENSMUST00000023123 Tex35Q14BK3 207 aa17.17■□□□□ 0.34
Col2a1-201ENSMUST00000023123 Klc3Q91W40 508 aa17.17■□□□□ 0.34
Col2a1-201ENSMUST00000023123 SncbQ91ZZ3 133 aa17.17■□□□□ 0.34
Col2a1-201ENSMUST00000023123 Naip6Q9JIB6 1403 aa17.17■□□□□ 0.34
Col2a1-201ENSMUST00000023123 Ncapd2Q8K2Z4 1392 aa17.17■□□□□ 0.34
Col2a1-201ENSMUST00000023123 Eif4a2P10630 407 aa17.17■□□□□ 0.34
Col2a1-201ENSMUST00000023123 Gm28047Q3US59 414 aa17.17■□□□□ 0.34
Col2a1-201ENSMUST00000023123 Kif5bQ61768 963 aa17.17■□□□□ 0.34
Col2a1-201ENSMUST00000023123 Capn2O08529 700 aa17.17■□□□□ 0.34
Col2a1-201ENSMUST00000023123 Acnat2Q8BGG9 420 aa17.17■□□□□ 0.34
Col2a1-201ENSMUST00000023123 Rab3il1Q8VDV3 383 aa17.17■□□□□ 0.34
Col2a1-201ENSMUST00000023123 Mlh1Q9JK91 760 aa17.17■□□□□ 0.34
Col2a1-201ENSMUST00000023123 Mug2P28666 1451 aa17.17■□□□□ 0.34
Col2a1-201ENSMUST00000023123 Kif5cP28738 956 aaKnown RBP17.17■□□□□ 0.34
Col2a1-201ENSMUST00000023123 Specc1lQ2KN98 1118 aaKnown RBP17.17■□□□□ 0.34
Col2a1-201ENSMUST00000023123 Atp1a2Q6PIE5 1020 aa17.17■□□□□ 0.34
Col2a1-201ENSMUST00000023123 Ankrd24Q80VM7 985 aa17.17■□□□□ 0.34
Col2a1-201ENSMUST00000023123 Slc14a2Q8R4T9 930 aa17.17■□□□□ 0.34
Col2a1-201ENSMUST00000023123 Nop2Q922K7 793 aaKnown RBP17.17■□□□□ 0.34
Col2a1-201ENSMUST00000023123 Efhd1Q9D4J1 240 aa17.16■□□□□ 0.34
Col2a1-201ENSMUST00000023123 Trappc8E9PWG2 1437 aa17.16■□□□□ 0.34
Col2a1-201ENSMUST00000023123 Cbfa2t2O70374 594 aa17.16■□□□□ 0.34
Col2a1-201ENSMUST00000023123 Gnat2P50149 354 aa17.16■□□□□ 0.34
Col2a1-201ENSMUST00000023123 Kiaa1328Q6NZK5 612 aa17.16■□□□□ 0.34
Col2a1-201ENSMUST00000023123 Kdm1aQ6ZQ88 853 aa17.16■□□□□ 0.34
Col2a1-201ENSMUST00000023123 Ccdc25Q78PG9 208 aa17.16■□□□□ 0.34
Col2a1-201ENSMUST00000023123 Bicc1Q99MQ1 977 aaKnown RBP17.16■□□□□ 0.34
Col2a1-201ENSMUST00000023123 Tacc3Q9JJ11 631 aa17.16■□□□□ 0.34
Col2a1-201ENSMUST00000023123 Gas2l2Q5SSG4 860 aa17.16■□□□□ 0.34
Col2a1-201ENSMUST00000023123 Micall1Q8BGT6 870 aa17.16■□□□□ 0.34
Col2a1-201ENSMUST00000023123 Gbp7Q91Z40 638 aa17.16■□□□□ 0.34
Col2a1-201ENSMUST00000023123 Nsfl1cQ9CZ44 370 aaKnown RBP17.16■□□□□ 0.34
Col2a1-201ENSMUST00000023123 Bach2P97303 839 aa17.16■□□□□ 0.34
Col2a1-201ENSMUST00000023123 L1td1Q587J6 782 aaKnown RBP17.16■□□□□ 0.34
Col2a1-201ENSMUST00000023123 Ddx23D3Z0M9 819 aaKnown RBP17.15■□□□□ 0.34
Col2a1-201ENSMUST00000023123 GnpatP98192 678 aa17.15■□□□□ 0.34
Col2a1-201ENSMUST00000023123 TchpQ3TVW5 497 aa17.15■□□□□ 0.34
Col2a1-201ENSMUST00000023123 Spats2Q8K1N4 545 aaKnown RBP17.15■□□□□ 0.34
Col2a1-201ENSMUST00000023123 Ccdc91Q9D8L5 442 aa17.15■□□□□ 0.34
Col2a1-201ENSMUST00000023123 Tcerg1lQ3B807 590 aa17.15■□□□□ 0.34
Col2a1-201ENSMUST00000023123 Zranb1Q7M760 708 aa17.15■□□□□ 0.34
Col2a1-201ENSMUST00000023123 Paip2Q9D6V8 124 aa17.15■□□□□ 0.34
Col2a1-201ENSMUST00000023123 Znf394Q9Z1D9 521 aa17.15■□□□□ 0.34
Col2a1-201ENSMUST00000023123 Nsd3Q6P2L6 1439 aa17.15■□□□□ 0.34
Col2a1-201ENSMUST00000023123 Tsr2Q8C8T8 191 aa17.15■□□□□ 0.34
Col2a1-201ENSMUST00000023123 Mxra7Q9CZH7 178 aa17.15■□□□□ 0.34
Col2a1-201ENSMUST00000023123 MthfsQ9D110 203 aa17.15■□□□□ 0.34
Col2a1-201ENSMUST00000023123 Wdr7Q920I9 1489 aa17.15■□□□□ 0.34
Col2a1-201ENSMUST00000023123 1700006A11RikB9EHI3 544 aa17.15■□□□□ 0.34
Col2a1-201ENSMUST00000023123 Usp11Q99K46 921 aa17.15■□□□□ 0.34
Col2a1-201ENSMUST00000023123 Kif21aQ9QXL2 1672 aa17.14■□□□□ 0.33
Retrieved 100 of 22,080 RNA–protein pairs in 17.8 ms