RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Fam102bQ8BQS4 339 aa19.26■□□□□ 0.67
Shh-201ENSMUST00000002708 Abca3Q8R420 1704 aa19.26■□□□□ 0.67
Shh-201ENSMUST00000002708 Krt25Q8VCW2 446 aa19.25■□□□□ 0.67
Shh-201ENSMUST00000002708 Mtx1P47802 317 aa19.25■□□□□ 0.67
Shh-201ENSMUST00000002708 Ccnl1Q52KE7 532 aaKnown RBP19.25■□□□□ 0.67
Shh-201ENSMUST00000002708 Hnrnpul1Q8VDM6 859 aaKnown RBP19.25■□□□□ 0.67
Shh-201ENSMUST00000002708 Ehd4Q9EQP2 541 aa19.25■□□□□ 0.67
Shh-201ENSMUST00000002708 Cfap58B2RW38 873 aa19.24■□□□□ 0.67
Shh-201ENSMUST00000002708 Slc4a1P04919 929 aa19.24■□□□□ 0.67
Shh-201ENSMUST00000002708 Gsdma2Q32M21 443 aa19.24■□□□□ 0.67
Shh-201ENSMUST00000002708 Gm12185Q5NCB2 835 aa19.24■□□□□ 0.67
Shh-201ENSMUST00000002708 CtifQ6PEE2 600 aaKnown RBP19.24■□□□□ 0.67
Shh-201ENSMUST00000002708 Smim5Q8BT42 78 aa19.24■□□□□ 0.67
Shh-201ENSMUST00000002708 Tubb6Q922F4 447 aa19.24■□□□□ 0.67
Shh-201ENSMUST00000002708 Osbpl5Q9ER64 874 aa19.24■□□□□ 0.67
Shh-201ENSMUST00000002708 Dusp10Q9ESS0 483 aa19.24■□□□□ 0.67
Shh-201ENSMUST00000002708 Hmgn5Q9JL35 406 aa19.24■□□□□ 0.67
Shh-201ENSMUST00000002708 Cdhr2E9Q7P9 1308 aa19.24■□□□□ 0.67
Shh-201ENSMUST00000002708 Sos2Q02384 1333 aa19.24■□□□□ 0.67
Shh-201ENSMUST00000002708 Tpm3P21107 285 aaKnown RBP19.24■□□□□ 0.67
Shh-201ENSMUST00000002708 Hspd1P63038 573 aaKnown RBP19.24■□□□□ 0.67
Shh-201ENSMUST00000002708 Asap2Q7SIG6 958 aa19.24■□□□□ 0.67
Shh-201ENSMUST00000002708 Golph3lQ8R088 285 aaKnown RBP19.24■□□□□ 0.67
Shh-201ENSMUST00000002708 Mrc1Q61830 1456 aa19.23■□□□□ 0.67
Shh-201ENSMUST00000002708 Col22a1E9Q7P1 1613 aa19.23■□□□□ 0.67
Shh-201ENSMUST00000002708 Shank3Q4ACU6 1730 aa19.23■□□□□ 0.67
Shh-201ENSMUST00000002708 Gm45140A0A0N4SUM8 220 aa19.23■□□□□ 0.67
Shh-201ENSMUST00000002708 Atp2b1G5E829 1220 aa19.23■□□□□ 0.67
Shh-201ENSMUST00000002708 Brinp3Q499E0 766 aa19.23■□□□□ 0.67
Shh-201ENSMUST00000002708 Smg7Q5RJH6 1138 aaKnown RBP19.23■□□□□ 0.67
Shh-201ENSMUST00000002708 Ube2oQ6ZPJ3 1288 aa19.23■□□□□ 0.67
Shh-201ENSMUST00000002708 Trim56Q80VI1 734 aaKnown RBP19.23■□□□□ 0.67
Shh-201ENSMUST00000002708 Hook1Q8BIL5 728 aa19.23■□□□□ 0.67
Shh-201ENSMUST00000002708 Tnrc6cQ3UHC0 1690 aaKnown RBP19.23■□□□□ 0.67
Shh-201ENSMUST00000002708 Fbxl16A2RT62 479 aa19.22■□□□□ 0.67
Shh-201ENSMUST00000002708 Cyp2d34L7N463 504 aa19.22■□□□□ 0.67
Shh-201ENSMUST00000002708 Gm21985Q6P6P5 1106 aa19.21■□□□□ 0.67
Shh-201ENSMUST00000002708 GptQ8QZR5 496 aa19.21■□□□□ 0.67
Shh-201ENSMUST00000002708 Akap11E9Q777 1895 aa19.21■□□□□ 0.67
Shh-201ENSMUST00000002708 Pard3Q99NH2 1333 aa19.21■□□□□ 0.67
Shh-201ENSMUST00000002708 Frat1P70339 274 aa19.21■□□□□ 0.67
Shh-201ENSMUST00000002708 Dnaaf2Q8BPI1 814 aa19.21■□□□□ 0.67
Shh-201ENSMUST00000002708 Tmem266Q8BZB3 538 aa19.21■□□□□ 0.67
Shh-201ENSMUST00000002708 Kcnk13Q8R1P5 405 aa19.21■□□□□ 0.67
Shh-201ENSMUST00000002708 ZgpatQ8VDM1 511 aa19.21■□□□□ 0.67
Shh-201ENSMUST00000002708 Snw1Q9CSN1 536 aaKnown RBP19.21■□□□□ 0.67
Shh-201ENSMUST00000002708 Pes1Q9EQ61 584 aaKnown RBP19.21■□□□□ 0.67
Shh-201ENSMUST00000002708 TnksQ6PFX9 1320 aa19.2■□□□□ 0.66
Shh-201ENSMUST00000002708 Limch1Q3UH68 1057 aa19.2■□□□□ 0.66
Shh-201ENSMUST00000002708 Lrrc8aQ80WG5 810 aa19.2■□□□□ 0.66
Shh-201ENSMUST00000002708 R3hcc1Q8BSI6 488 aa19.2■□□□□ 0.66
Shh-201ENSMUST00000002708 Slx1bQ8BX32 270 aa19.2■□□□□ 0.66
Shh-201ENSMUST00000002708 AidaQ8C4Q6 305 aa19.2■□□□□ 0.66
Shh-201ENSMUST00000002708 Pms1Q8K119 917 aa19.2■□□□□ 0.66
Shh-201ENSMUST00000002708 ApobrQ8VBT6 942 aa19.2■□□□□ 0.66
Shh-201ENSMUST00000002708 Rdm1Q9CQK3 281 aa19.2■□□□□ 0.66
Shh-201ENSMUST00000002708 IncenpQ9WU62 880 aa19.2■□□□□ 0.66
Shh-201ENSMUST00000002708 DccP70211 1447 aa19.2■□□□□ 0.66
Shh-201ENSMUST00000002708 Anxa1P10107 346 aaKnown RBP19.2■□□□□ 0.66
Shh-201ENSMUST00000002708 Kcnq3Q8K3F6 873 aa19.2■□□□□ 0.66
Shh-201ENSMUST00000002708 Zscan29E9Q5B4 869 aa19.2■□□□□ 0.66
Shh-201ENSMUST00000002708 Nol10Q5RJG1 687 aaKnown RBP19.2■□□□□ 0.66
Shh-201ENSMUST00000002708 Hand2Q61039 217 aa19.2■□□□□ 0.66
Shh-201ENSMUST00000002708 Spty2d1Q68FG3 682 aa19.2■□□□□ 0.66
Shh-201ENSMUST00000002708 Fsd1Q7TPM6 496 aa19.2■□□□□ 0.66
Shh-201ENSMUST00000002708 Tmem67Q8BR76 992 aa19.2■□□□□ 0.66
Shh-201ENSMUST00000002708 AbraQ8BUZ1 375 aa19.2■□□□□ 0.66
Shh-201ENSMUST00000002708 Npc1l1Q6T3U4 1333 aa19.19■□□□□ 0.66
Shh-201ENSMUST00000002708 Hps3Q91VB4 1002 aa19.19■□□□□ 0.66
Shh-201ENSMUST00000002708 Ciao1Q99KN2 339 aa19.19■□□□□ 0.66
Shh-201ENSMUST00000002708 Ltbp4Q8K4G1 1666 aa19.18■□□□□ 0.66
Shh-201ENSMUST00000002708 Rgs9O54828 675 aa19.18■□□□□ 0.66
Shh-201ENSMUST00000002708 Exosc10P56960 887 aaKnown RBP19.18■□□□□ 0.66
Shh-201ENSMUST00000002708 Zhx1P70121 873 aa19.18■□□□□ 0.66
Shh-201ENSMUST00000002708 Dhx40Q6PE54 779 aaKnown RBP19.18■□□□□ 0.66
Shh-201ENSMUST00000002708 Crb1Q8VHS2 1405 aa19.18■□□□□ 0.66
Shh-201ENSMUST00000002708 Smarcc2Q6PDG5 1213 aa19.18■□□□□ 0.66
Shh-201ENSMUST00000002708 Ccne2Q9Z238 404 aa19.18■□□□□ 0.66
Shh-201ENSMUST00000002708 Usp42B2RQC2 1324 aaKnown RBP19.17■□□□□ 0.66
Shh-201ENSMUST00000002708 Bin1O08539 588 aaKnown RBP19.17■□□□□ 0.66
Shh-201ENSMUST00000002708 XpcP51612 930 aa19.17■□□□□ 0.66
Shh-201ENSMUST00000002708 Ccdc82Q6PG04 518 aa19.17■□□□□ 0.66
Shh-201ENSMUST00000002708 Mrpl44Q9CY73 333 aaKnown RBP19.17■□□□□ 0.66
Shh-201ENSMUST00000002708 Ccdc112A0AUP1 442 aa19.17■□□□□ 0.66
Shh-201ENSMUST00000002708 Cep135Q6P5D4 1140 aa19.17■□□□□ 0.66
Shh-201ENSMUST00000002708 Zfp397Q7TNK4 527 aa19.17■□□□□ 0.66
Shh-201ENSMUST00000002708 Alg3Q8K2A8 438 aa19.17■□□□□ 0.66
Shh-201ENSMUST00000002708 Sipa1l3G3X9J0 1776 aa19.17■□□□□ 0.66
Shh-201ENSMUST00000002708 Pramel3A2AHA7 463 aa19.16■□□□□ 0.66
Shh-201ENSMUST00000002708 Gm7903A2AWL1 463 aa19.16■□□□□ 0.66
Shh-201ENSMUST00000002708 AV320801A2AWL3 467 aa19.16■□□□□ 0.66
Shh-201ENSMUST00000002708 Gm15023L7MUB4 467 aa19.16■□□□□ 0.66
Shh-201ENSMUST00000002708 Clec11aO88200 328 aa19.16■□□□□ 0.66
Shh-201ENSMUST00000002708 Tmem109Q3UBX0 243 aa19.16■□□□□ 0.66
Shh-201ENSMUST00000002708 Clca2Q8BG22 942 aa19.16■□□□□ 0.66
Shh-201ENSMUST00000002708 Nav1Q8CH77 1875 aa19.16■□□□□ 0.66
Shh-201ENSMUST00000002708 Cyp19a1P28649 503 aa19.16■□□□□ 0.66
Shh-201ENSMUST00000002708 Mtmr3Q8K296 1196 aa19.16■□□□□ 0.66
Shh-201ENSMUST00000002708 Mylk2Q8VCR8 613 aa19.16■□□□□ 0.66
Shh-201ENSMUST00000002708 Nip7Q9CXK8 180 aaKnown RBP19.16■□□□□ 0.66
Retrieved 100 of 22,080 RNA–protein pairs in 87.9 ms