RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 KLHL13Q9P2N7 655 aa12.24□□□□□ -0.45
PHGDH-233ENST00000642021 A0A0B4J2A0 478 aa12.24□□□□□ -0.45
PHGDH-233ENST00000642021 ZNF814B7Z6K7 855 aa12.24□□□□□ -0.45
PHGDH-233ENST00000642021 FGF16O43320 207 aa12.24□□□□□ -0.45
PHGDH-233ENST00000642021 CSNK1EP49674 416 aaKnown RBP12.24□□□□□ -0.45
PHGDH-233ENST00000642021 BPIFB3P59826 476 aa12.24□□□□□ -0.45
PHGDH-233ENST00000642021 SLC9A3R2Q15599 337 aa12.24□□□□□ -0.45
PHGDH-233ENST00000642021 ABHD12BQ7Z5M8 362 aaPredicted RBP12.24□□□□□ -0.45
PHGDH-233ENST00000642021 ARMC10Q8N2F6 343 aa12.24□□□□□ -0.45
PHGDH-233ENST00000642021 ZNF565Q8N9K5 539 aa12.24□□□□□ -0.45
PHGDH-233ENST00000642021 PAQR8Q8TEZ7 354 aa12.24□□□□□ -0.45
PHGDH-233ENST00000642021 SHPKQ9UHJ6 478 aa12.24□□□□□ -0.45
PHGDH-233ENST00000642021 GPR132Q9UNW8 380 aa12.24□□□□□ -0.45
PHGDH-233ENST00000642021 C5orf63A6NC05 138 aa12.23□□□□□ -0.45
PHGDH-233ENST00000642021 NPIPB13A6NJU9 1138 aa12.23□□□□□ -0.45
PHGDH-233ENST00000642021 NPIPB4C9JG80 1138 aa12.23□□□□□ -0.45
PHGDH-233ENST00000642021 PRSS44E7EML9 344 aa12.23□□□□□ -0.45
PHGDH-233ENST00000642021 F8VVB4 439 aa12.23□□□□□ -0.45
PHGDH-233ENST00000642021 F8VWA3 439 aa12.23□□□□□ -0.45
PHGDH-233ENST00000642021 HNRNPKP61978 463 aaKnown RBP eCLIP12.23□□□□□ -0.453e-7■□□□□ 8.5
PHGDH-233ENST00000642021 MYBPHQ13203 477 aa12.23□□□□□ -0.45
PHGDH-233ENST00000642021 CARD17Q5XLA6 110 aa12.23□□□□□ -0.45
PHGDH-233ENST00000642021 COMMD2Q86X83 199 aa12.23□□□□□ -0.45
PHGDH-233ENST00000642021 MISPQ8IVT2 679 aa12.23□□□□□ -0.45
PHGDH-233ENST00000642021 GTPBP8Q8N3Z3 284 aaPredicted RBP12.23□□□□□ -0.45
PHGDH-233ENST00000642021 NFAM1Q8NET5 270 aaPredicted RBP12.23□□□□□ -0.45
PHGDH-233ENST00000642021 OR8B12Q8NGG6 310 aa12.23□□□□□ -0.45
PHGDH-233ENST00000642021 DDIT4LQ96D03 193 aa12.23□□□□□ -0.45
PHGDH-233ENST00000642021 FBLN5Q9UBX5 448 aa12.23□□□□□ -0.45
PHGDH-233ENST00000642021 PURGQ9UJV8 347 aaKnown RBP12.23□□□□□ -0.45
PHGDH-233ENST00000642021 LHX6Q9UPM6 363 aa12.23□□□□□ -0.45
PHGDH-233ENST00000642021 MRPS28Q9Y2Q9 187 aaKnown RBP12.23□□□□□ -0.45
PHGDH-233ENST00000642021 COL5A1P20908 1838 aaPredicted RBP12.23□□□□□ -0.45
PHGDH-233ENST00000642021 TRBV6-7A0A0A0MS04 114 aa12.23□□□□□ -0.45
PHGDH-233ENST00000642021 TEX13DA0A0J9YY54 714 aaPredicted RBP12.23□□□□□ -0.45
PHGDH-233ENST00000642021 VSTM2BA6NLU5 285 aa12.23□□□□□ -0.45
PHGDH-233ENST00000642021 E9PLN8 166 aa12.23□□□□□ -0.45
PHGDH-233ENST00000642021 RER1O15258 196 aa12.23□□□□□ -0.45
PHGDH-233ENST00000642021 KLK2P20151 261 aa12.23□□□□□ -0.45
PHGDH-233ENST00000642021 PLEKHN1Q494U1 663 aaPredicted RBP12.23□□□□□ -0.45
PHGDH-233ENST00000642021 TMEM71Q6P5X7 295 aa12.23□□□□□ -0.45
PHGDH-233ENST00000642021 CCDC36Q8IYA8 594 aa12.23□□□□□ -0.45
PHGDH-233ENST00000642021 POC1BQ8TC44 478 aa12.23□□□□□ -0.45
PHGDH-233ENST00000642021 TMED6Q8WW62 240 aa12.23□□□□□ -0.45
PHGDH-233ENST00000642021 RAB3CQ96E17 227 aa12.23□□□□□ -0.45
PHGDH-233ENST00000642021 FAM71F1Q96KD3 344 aaPredicted RBP12.23□□□□□ -0.45
PHGDH-233ENST00000642021 GPR84Q9NQS5 396 aa12.23□□□□□ -0.45
PHGDH-233ENST00000642021 B3GALT5Q9Y2C3 310 aa12.23□□□□□ -0.45
PHGDH-233ENST00000642021 ARID1AO14497 2285 aa12.23□□□□□ -0.45
PHGDH-233ENST00000642021 A0A1W2PNR3 127 aa12.22□□□□□ -0.45
PHGDH-233ENST00000642021 CDC14BO60729 498 aa12.22□□□□□ -0.45
PHGDH-233ENST00000642021 RAMP1O60894 148 aa12.22□□□□□ -0.45
PHGDH-233ENST00000642021 F12P00748 615 aaPredicted RBP12.22□□□□□ -0.45
PHGDH-233ENST00000642021 ZNF20P17024 532 aa12.22□□□□□ -0.45
PHGDH-233ENST00000642021 ZNF121P58317 390 aaPredicted RBP12.22□□□□□ -0.45
PHGDH-233ENST00000642021 SUPT4H1P63272 117 aaKnown RBP12.22□□□□□ -0.45
PHGDH-233ENST00000642021 SGCAQ16586 387 aa12.22□□□□□ -0.45
PHGDH-233ENST00000642021 GFOD2Q3B7J2 385 aa12.22□□□□□ -0.45
PHGDH-233ENST00000642021 TMEM128Q5BJH2 165 aa12.22□□□□□ -0.45
PHGDH-233ENST00000642021 CLEC18BQ6UXF7 455 aa12.22□□□□□ -0.45
PHGDH-233ENST00000642021 LDLRAD3Q86YD5 345 aa12.22□□□□□ -0.45
PHGDH-233ENST00000642021 PLXDC1Q8IUK5 500 aa12.22□□□□□ -0.45
PHGDH-233ENST00000642021 ARHGAP5-AS1Q96IT6 56 aa12.22□□□□□ -0.45
PHGDH-233ENST00000642021 TSNAXQ99598 290 aaKnown RBP12.22□□□□□ -0.45
PHGDH-233ENST00000642021 ASH2LQ9UBL3 628 aa12.22□□□□□ -0.45
PHGDH-233ENST00000642021 TRAV20A0A0B4J274 112 aa12.22□□□□□ -0.45
PHGDH-233ENST00000642021 HIST1H1DP16402 221 aaKnown RBP12.22□□□□□ -0.45
PHGDH-233ENST00000642021 GSK3AP49840 483 aa12.22□□□□□ -0.45
PHGDH-233ENST00000642021 TMEM200AQ86VY9 491 aa12.22□□□□□ -0.45
PHGDH-233ENST00000642021 BAP18Q8IXM2 172 aa12.22□□□□□ -0.45
PHGDH-233ENST00000642021 STOML3Q8TAV4 291 aa12.22□□□□□ -0.45
PHGDH-233ENST00000642021 NMES1Q9C002 83 aa12.22□□□□□ -0.45
PHGDH-233ENST00000642021 LMAN1LQ9HAT1 526 aa12.22□□□□□ -0.45
PHGDH-233ENST00000642021 ALKBH4Q9NXW9 302 aa12.22□□□□□ -0.45
PHGDH-233ENST00000642021 OR5AC2Q9NZP5 309 aa12.22□□□□□ -0.45
PHGDH-233ENST00000642021 POLR1DQ9Y2S0 133 aa12.22□□□□□ -0.45
PHGDH-233ENST00000642021 IGKV1-9A0A0C4DH69 117 aa12.21□□□□□ -0.45
PHGDH-233ENST00000642021 RAB19A4D1S5 217 aa12.21□□□□□ -0.45
PHGDH-233ENST00000642021 PIAS2O75928 621 aa12.21□□□□□ -0.45
PHGDH-233ENST00000642021 CHRM2P08172 466 aa12.21□□□□□ -0.45
PHGDH-233ENST00000642021 PGA4P0DJD7 388 aa12.21□□□□□ -0.45
PHGDH-233ENST00000642021 PGA3P0DJD8 388 aa12.21□□□□□ -0.45
PHGDH-233ENST00000642021 CD79AP11912 226 aa12.21□□□□□ -0.45
PHGDH-233ENST00000642021 TBPP20226 339 aa12.21□□□□□ -0.45
PHGDH-233ENST00000642021 P2RY4P51582 365 aa12.21□□□□□ -0.45
PHGDH-233ENST00000642021 NXPH1P58417 271 aa12.21□□□□□ -0.45
PHGDH-233ENST00000642021 ANKRD55Q3KP44 614 aa12.21□□□□□ -0.45
PHGDH-233ENST00000642021 UQCC3Q6UW78 93 aa12.21□□□□□ -0.45
PHGDH-233ENST00000642021 C1QL2Q7Z5L3 287 aa12.21□□□□□ -0.45
PHGDH-233ENST00000642021 SLC30A7Q8NEW0 376 aa12.21□□□□□ -0.45
PHGDH-233ENST00000642021 OR4A4PQ8NGN8 299 aa12.21□□□□□ -0.45
PHGDH-233ENST00000642021 MAFIPQ8WZ33 124 aa12.21□□□□□ -0.45
PHGDH-233ENST00000642021 RTBDNQ9BSG5 229 aaPredicted RBP12.21□□□□□ -0.45
PHGDH-233ENST00000642021 TMEM100Q9NV29 134 aa12.21□□□□□ -0.45
PHGDH-233ENST00000642021 SRPK3Q9UPE1 567 aa12.21□□□□□ -0.45
PHGDH-233ENST00000642021 SDCBPO00560 298 aaPredicted RBP12.21□□□□□ -0.46
PHGDH-233ENST00000642021 FAM157CP0CG43 387 aa12.21□□□□□ -0.46
PHGDH-233ENST00000642021 CLRN1P58418 232 aa12.21□□□□□ -0.46
PHGDH-233ENST00000642021 NKAPLQ5M9Q1 402 aa12.21□□□□□ -0.46
PHGDH-233ENST00000642021 THEM4Q5T1C6 240 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms