RNA–Protein interactions for RNA: ENST00000640872.1

PAX6-280, Transcript of paired box 6, humanhuman

TSL 1 (best)

Gene PAX6, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-280ENST00000640872 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.14□□□□□ -0.47
PAX6-280ENST00000640872 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.14□□□□□ -0.47
PAX6-280ENST00000640872 A6NIZ1 184 aa12.14□□□□□ -0.47
PAX6-280ENST00000640872 C1orf196B1AJZ1 125 aa12.14□□□□□ -0.47
PAX6-280ENST00000640872 SOX1O00570 391 aaPredicted RBP12.14□□□□□ -0.47
PAX6-280ENST00000640872 SOCS1O15524 211 aa12.14□□□□□ -0.47
PAX6-280ENST00000640872 RAD51DO75771 328 aa12.14□□□□□ -0.47
PAX6-280ENST00000640872 AHSA1O95433 338 aa12.14□□□□□ -0.47
PAX6-280ENST00000640872 PET100P0DJ07 73 aa12.14□□□□□ -0.47
PAX6-280ENST00000640872 RPS2P15880 293 aaKnown RBP12.14□□□□□ -0.47
PAX6-280ENST00000640872 HIST1H1DP16402 221 aaKnown RBP12.14□□□□□ -0.47
PAX6-280ENST00000640872 ZNF93P35789 620 aaPredicted RBP12.14□□□□□ -0.47
PAX6-280ENST00000640872 LTBRP36941 435 aa12.14□□□□□ -0.47
PAX6-280ENST00000640872 RAP1BP61224 184 aa12.14□□□□□ -0.47
PAX6-280ENST00000640872 POLR2GP62487 172 aaKnown RBP eCLIP12.14□□□□□ -0.47
PAX6-280ENST00000640872 RAP1AP62834 184 aa12.14□□□□□ -0.47
PAX6-280ENST00000640872 RNF212Q495C1 297 aa12.14□□□□□ -0.47
PAX6-280ENST00000640872 TMEM92Q6UXU6 159 aa12.14□□□□□ -0.47
PAX6-280ENST00000640872 GRINAQ7Z429 371 aa12.14□□□□□ -0.47
PAX6-280ENST00000640872 TMEM104Q8NE00 496 aa12.14□□□□□ -0.47
PAX6-280ENST00000640872 TSLPQ969D9 159 aa12.14□□□□□ -0.47
PAX6-280ENST00000640872 KIRREL1Q96J84 757 aa12.14□□□□□ -0.47
PAX6-280ENST00000640872 KCNK17Q96T54 332 aa12.14□□□□□ -0.47
PAX6-280ENST00000640872 TBL1XR1Q9BZK7 514 aa12.14□□□□□ -0.47
PAX6-280ENST00000640872 PBOV1Q9GZY1 135 aa12.14□□□□□ -0.47
PAX6-280ENST00000640872 SEBOXQ9HB31 216 aaPredicted RBP12.14□□□□□ -0.47
PAX6-280ENST00000640872 ZNF304Q9HCX3 659 aa12.14□□□□□ -0.47
PAX6-280ENST00000640872 GSN-AS1Q9NRJ2 163 aa12.14□□□□□ -0.47
PAX6-280ENST00000640872 ARID1BQ8NFD5 2236 aaPredicted RBP12.13□□□□□ -0.47
PAX6-280ENST00000640872 MS4A18H0YCH9 400 aa12.13□□□□□ -0.47
PAX6-280ENST00000640872 AGPAT2O15120 278 aa12.13□□□□□ -0.47
PAX6-280ENST00000640872 HKR1P10072 659 aa12.13□□□□□ -0.47
PAX6-280ENST00000640872 DVL1P1P54792 670 aaPredicted RBP12.13□□□□□ -0.47
PAX6-280ENST00000640872 FOXK1P85037 733 aa12.13□□□□□ -0.47
PAX6-280ENST00000640872 EBPQ15125 230 aaKnown RBP12.13□□□□□ -0.47
PAX6-280ENST00000640872 MS4A18Q3C1V0 323 aa12.13□□□□□ -0.47
PAX6-280ENST00000640872 FAM76BQ5HYJ3 339 aa12.13□□□□□ -0.47
PAX6-280ENST00000640872 Q7L0L9 218 aa12.13□□□□□ -0.47
PAX6-280ENST00000640872 ZNF101Q8IZC7 436 aa12.13□□□□□ -0.47
PAX6-280ENST00000640872 LINC00469Q8N7U9 141 aa12.13□□□□□ -0.47
PAX6-280ENST00000640872 OR5D14Q8NGL3 314 aa12.13□□□□□ -0.47
PAX6-280ENST00000640872 OR13G1Q8NGZ3 307 aa12.13□□□□□ -0.47
PAX6-280ENST00000640872 RAB3CQ96E17 227 aa12.13□□□□□ -0.47
PAX6-280ENST00000640872 NECAB3Q96P71 396 aaPredicted RBP12.13□□□□□ -0.47
PAX6-280ENST00000640872 METTL8Q9H825 291 aaKnown RBP12.13□□□□□ -0.47
PAX6-280ENST00000640872 SRPK3Q9UPE1 567 aa12.13□□□□□ -0.47
PAX6-280ENST00000640872 PMS2P1A4D2B8 440 aa12.13□□□□□ -0.47
PAX6-280ENST00000640872 H0YIG0 161 aa12.13□□□□□ -0.47
PAX6-280ENST00000640872 AGAP20933 346 aa12.13□□□□□ -0.47
PAX6-280ENST00000640872 BCKDHBP21953 392 aa12.13□□□□□ -0.47
PAX6-280ENST00000640872 PPT1P50897 306 aa12.13□□□□□ -0.47
PAX6-280ENST00000640872 P2RY4P51582 365 aa12.13□□□□□ -0.47
PAX6-280ENST00000640872 TMEM50BP56557 158 aa12.13□□□□□ -0.47
PAX6-280ENST00000640872 SMCO1Q147U7 214 aa12.13□□□□□ -0.47
PAX6-280ENST00000640872 EIF2S3LQ2VIR3 472 aaKnown RBP12.13□□□□□ -0.47
PAX6-280ENST00000640872 AADACL3Q5VUY0 350 aa12.13□□□□□ -0.47
PAX6-280ENST00000640872 GLIPR1L1Q6UWM5 242 aa12.13□□□□□ -0.47
PAX6-280ENST00000640872 C9orf40Q8IXQ3 194 aa12.13□□□□□ -0.47
PAX6-280ENST00000640872 LYPD6BQ8NI32 183 aa12.13□□□□□ -0.47
PAX6-280ENST00000640872 GPR119Q8TDV5 335 aa12.13□□□□□ -0.47
PAX6-280ENST00000640872 SLAMF6Q96DU3 332 aa12.13□□□□□ -0.47
PAX6-280ENST00000640872 SCGB3A2Q96PL1 93 aa12.13□□□□□ -0.47
PAX6-280ENST00000640872 OCSTAMPQ9BR26 566 aa12.13□□□□□ -0.47
PAX6-280ENST00000640872 NAA11Q9BSU3 229 aaPredicted RBP12.13□□□□□ -0.47
PAX6-280ENST00000640872 OSGIN2Q9Y236 505 aa12.13□□□□□ -0.47
PAX6-280ENST00000640872 HS3ST3A1Q9Y663 406 aa12.13□□□□□ -0.47
PAX6-280ENST00000640872 COL6A3P12111 3177 aa12.12□□□□□ -0.47
PAX6-280ENST00000640872 CDC14BO60729 498 aa12.12□□□□□ -0.47
PAX6-280ENST00000640872 MPIG6BO95866 241 aa12.12□□□□□ -0.47
PAX6-280ENST00000640872 ZNF806P0C7X5 589 aa12.12□□□□□ -0.47
PAX6-280ENST00000640872 CBR1P16152 277 aa12.12□□□□□ -0.47
PAX6-280ENST00000640872 CPT2P23786 658 aa12.12□□□□□ -0.47
PAX6-280ENST00000640872 ID4P47928 161 aa12.12□□□□□ -0.47
PAX6-280ENST00000640872 S100A10P60903 97 aa12.12□□□□□ -0.47
PAX6-280ENST00000640872 C1orf61Q13536 156 aa12.12□□□□□ -0.47
PAX6-280ENST00000640872 FAM209BQ5JX69 171 aa12.12□□□□□ -0.47
PAX6-280ENST00000640872 OR5AS1Q8N127 324 aa12.12□□□□□ -0.47
PAX6-280ENST00000640872 OR10S1Q8NGN2 331 aa12.12□□□□□ -0.47
PAX6-280ENST00000640872 OR5H2Q8NGV7 314 aa12.12□□□□□ -0.47
PAX6-280ENST00000640872 AKR1E2Q96JD6 320 aa12.12□□□□□ -0.47
PAX6-280ENST00000640872 SPACA5Q96QH8 159 aa12.12□□□□□ -0.47
PAX6-280ENST00000640872 MRPS28Q9Y2Q9 187 aaKnown RBP12.12□□□□□ -0.47
PAX6-280ENST00000640872 KPTNQ9Y664 436 aa12.12□□□□□ -0.47
PAX6-280ENST00000640872 COL5A1P20908 1838 aaPredicted RBP12.12□□□□□ -0.47
PAX6-280ENST00000640872 IGKV3D-11A0A0A0MRZ8 115 aa12.12□□□□□ -0.47
PAX6-280ENST00000640872 NPIPA5E9PKD4 350 aa12.12□□□□□ -0.47
PAX6-280ENST00000640872 TO15178 435 aa12.12□□□□□ -0.47
PAX6-280ENST00000640872 ZNF354AO60765 605 aaPredicted RBP12.12□□□□□ -0.47
PAX6-280ENST00000640872 CST4P01036 141 aa12.12□□□□□ -0.47
PAX6-280ENST00000640872 S100A9P06702 114 aaKnown RBP12.12□□□□□ -0.47
PAX6-280ENST00000640872 OR8U9P0C7N5 309 aa12.12□□□□□ -0.47
PAX6-280ENST00000640872 NAT2P11245 290 aa12.12□□□□□ -0.47
PAX6-280ENST00000640872 AKR1C3P42330 323 aa12.12□□□□□ -0.47
PAX6-280ENST00000640872 DCAF7P61962 342 aa12.12□□□□□ -0.47
PAX6-280ENST00000640872 SPEM2Q0P670 501 aa12.12□□□□□ -0.47
PAX6-280ENST00000640872 PLCXD2Q0VAA5 305 aa12.12□□□□□ -0.47
PAX6-280ENST00000640872 ZP4Q12836 540 aa12.12□□□□□ -0.47
PAX6-280ENST00000640872 Q6ZRG5 221 aa12.12□□□□□ -0.47
PAX6-280ENST00000640872 ZNF248Q8NDW4 579 aa12.12□□□□□ -0.47
PAX6-280ENST00000640872 OR8U1Q8NH10 309 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms