RNA–Protein interactions for RNA: ENST00000640748.1

ERGIC3-220, Transcript of ERGIC and golgi 3, humanhuman

TSL 5 BASIC

Gene ERGIC3, Length 832 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-220ENST00000640748 TMEM106AQ96A25 262 aa10.32□□□□□ -0.76
ERGIC3-220ENST00000640748 ALKBH3Q96Q83 286 aaPredicted RBP10.32□□□□□ -0.76
ERGIC3-220ENST00000640748 KCNJ15Q99712 375 aa10.32□□□□□ -0.76
ERGIC3-220ENST00000640748 WACQ9BTA9 647 aa10.32□□□□□ -0.76
ERGIC3-220ENST00000640748 CCDC32Q9BV29 185 aa10.32□□□□□ -0.76
ERGIC3-220ENST00000640748 PBOV1Q9GZY1 135 aa10.32□□□□□ -0.76
ERGIC3-220ENST00000640748 GP6Q9HCN6 339 aa10.32□□□□□ -0.76
ERGIC3-220ENST00000640748 BRD7Q9NPI1 651 aa10.32□□□□□ -0.76
ERGIC3-220ENST00000640748 DDX28Q9NUL7 540 aaKnown RBP10.32□□□□□ -0.76
ERGIC3-220ENST00000640748 NUFIP1Q9UHK0 495 aaKnown RBP10.32□□□□□ -0.76
ERGIC3-220ENST00000640748 V9GY05 133 aa10.32□□□□□ -0.76
ERGIC3-220ENST00000640748 MXRA5Q9NR99 2828 aa10.31□□□□□ -0.76
ERGIC3-220ENST00000640748 LOC107986453A0A1B0GWG9 222 aa10.31□□□□□ -0.76
ERGIC3-220ENST00000640748 FABP12A6NFH5 140 aa10.31□□□□□ -0.76
ERGIC3-220ENST00000640748 FAM25AB3EWG3 89 aa10.31□□□□□ -0.76
ERGIC3-220ENST00000640748 FAM25CB3EWG5 89 aa10.31□□□□□ -0.76
ERGIC3-220ENST00000640748 FAM25GB3EWG6 89 aa10.31□□□□□ -0.76
ERGIC3-220ENST00000640748 P2RY10O00398 339 aa10.31□□□□□ -0.76
ERGIC3-220ENST00000640748 FARS2O95363 451 aaKnown RBP10.31□□□□□ -0.76
ERGIC3-220ENST00000640748 SLC2A2P11168 524 aaPredicted RBP10.31□□□□□ -0.76
ERGIC3-220ENST00000640748 ZNF12P17014 697 aa10.31□□□□□ -0.76
ERGIC3-220ENST00000640748 ATF1P18846 271 aa10.31□□□□□ -0.76
ERGIC3-220ENST00000640748 PTBP1P26599 531 aaKnown RBP eCLIP10.31□□□□□ -0.76
ERGIC3-220ENST00000640748 THBS2P35442 1172 aa10.31□□□□□ -0.76
ERGIC3-220ENST00000640748 CX3CR1P49238 355 aa10.31□□□□□ -0.76
ERGIC3-220ENST00000640748 PRKXP51817 358 aa10.31□□□□□ -0.76
ERGIC3-220ENST00000640748 PCBD1P61457 104 aa10.31□□□□□ -0.76
ERGIC3-220ENST00000640748 SCRN3Q0VDG4 424 aa10.31□□□□□ -0.76
ERGIC3-220ENST00000640748 RGS21Q2M5E4 152 aa10.31□□□□□ -0.76
ERGIC3-220ENST00000640748 CCDC92Q53HC0 331 aaPredicted RBP10.31□□□□□ -0.76
ERGIC3-220ENST00000640748 BEX5Q5H9J7 111 aa10.31□□□□□ -0.76
ERGIC3-220ENST00000640748 TSPO2Q5TGU0 170 aa10.31□□□□□ -0.76
ERGIC3-220ENST00000640748 FAM131AQ6UXB0 335 aa10.31□□□□□ -0.76
ERGIC3-220ENST00000640748 LINGO2Q7L985 606 aa10.31□□□□□ -0.76
ERGIC3-220ENST00000640748 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.31□□□□□ -0.76
ERGIC3-220ENST00000640748 SYT9Q86SS6 491 aa10.31□□□□□ -0.76
ERGIC3-220ENST00000640748 LRRTM1Q86UE6 522 aa10.31□□□□□ -0.76
ERGIC3-220ENST00000640748 ZNF433Q8N7K0 673 aaPredicted RBP10.31□□□□□ -0.76
ERGIC3-220ENST00000640748 OR51A4Q8NGJ6 313 aa10.31□□□□□ -0.76
ERGIC3-220ENST00000640748 OR13C3Q8NGS6 347 aa10.31□□□□□ -0.76
ERGIC3-220ENST00000640748 SPATA3Q8NHX4 192 aa10.31□□□□□ -0.76
ERGIC3-220ENST00000640748 TRMT10AQ8TBZ6 339 aaKnown RBP10.31□□□□□ -0.76
ERGIC3-220ENST00000640748 APH1AQ96BI3 265 aa10.31□□□□□ -0.76
ERGIC3-220ENST00000640748 ORAI1Q96D31 301 aa10.31□□□□□ -0.76
ERGIC3-220ENST00000640748 ZNF837Q96EG3 531 aaPredicted RBP10.31□□□□□ -0.76
ERGIC3-220ENST00000640748 MRI1Q9BV20 369 aa10.31□□□□□ -0.76
ERGIC3-220ENST00000640748 ABCB10Q9NRK6 738 aa10.31□□□□□ -0.76
ERGIC3-220ENST00000640748 UPB1Q9UBR1 384 aa10.31□□□□□ -0.76
ERGIC3-220ENST00000640748 CLEC4AQ9UMR7 237 aa10.31□□□□□ -0.76
ERGIC3-220ENST00000640748 FOXJ3Q9UPW0 622 aa10.31□□□□□ -0.76
ERGIC3-220ENST00000640748 V9GYH0 126 aa10.31□□□□□ -0.76
ERGIC3-220ENST00000640748 A0A1B0GVI7 797 aa10.3□□□□□ -0.76
ERGIC3-220ENST00000640748 ISPDA4D126 451 aa10.3□□□□□ -0.76
ERGIC3-220ENST00000640748 ANXA2P2A6NMY6 339 aa10.3□□□□□ -0.76
ERGIC3-220ENST00000640748 ZNF587BE7ETH6 402 aa10.3□□□□□ -0.76
ERGIC3-220ENST00000640748 H3BSH0 61 aa10.3□□□□□ -0.76
ERGIC3-220ENST00000640748 RPL36A-HNRNPH2H7BZ11 118 aa10.3□□□□□ -0.76
ERGIC3-220ENST00000640748 HS3ST1O14792 307 aa10.3□□□□□ -0.76
ERGIC3-220ENST00000640748 TBX1O43435 398 aa10.3□□□□□ -0.76
ERGIC3-220ENST00000640748 SS18L1O75177 396 aaPredicted RBP10.3□□□□□ -0.76
ERGIC3-220ENST00000640748 CRLF1O75462 422 aa10.3□□□□□ -0.76
ERGIC3-220ENST00000640748 TTRP02766 147 aa10.3□□□□□ -0.76
ERGIC3-220ENST00000640748 ANXA2P07355 339 aaKnown RBP10.3□□□□□ -0.76
ERGIC3-220ENST00000640748 ACSM4P0C7M7 580 aa10.3□□□□□ -0.76
ERGIC3-220ENST00000640748 PPP3CBP16298 524 aa10.3□□□□□ -0.76
ERGIC3-220ENST00000640748 FSTP19883 344 aa10.3□□□□□ -0.76
ERGIC3-220ENST00000640748 EVX1P49640 407 aa10.3□□□□□ -0.76
ERGIC3-220ENST00000640748 ZNF121P58317 390 aaPredicted RBP10.3□□□□□ -0.76
ERGIC3-220ENST00000640748 ECH1Q13011 328 aa10.3□□□□□ -0.76
ERGIC3-220ENST00000640748 TNK1Q13470 666 aa10.3□□□□□ -0.76
ERGIC3-220ENST00000640748 RAB35Q15286 201 aa10.3□□□□□ -0.76
ERGIC3-220ENST00000640748 NRN1LQ496H8 165 aa10.3□□□□□ -0.76
ERGIC3-220ENST00000640748 CNIH2Q6PI25 160 aa10.3□□□□□ -0.76
ERGIC3-220ENST00000640748 ZNF813Q6ZN06 617 aa10.3□□□□□ -0.76
ERGIC3-220ENST00000640748 SLC16A14Q7RTX9 510 aa10.3□□□□□ -0.76
ERGIC3-220ENST00000640748 LRRC28Q86X40 367 aaPredicted RBP10.3□□□□□ -0.76
ERGIC3-220ENST00000640748 ZNF100Q8IYN0 542 aa10.3□□□□□ -0.76
ERGIC3-220ENST00000640748 SLC22A24Q8N4F4 322 aa10.3□□□□□ -0.76
ERGIC3-220ENST00000640748 ZNF611Q8N823 705 aa10.3□□□□□ -0.76
ERGIC3-220ENST00000640748 OR6K3Q8NGY3 331 aa10.3□□□□□ -0.76
ERGIC3-220ENST00000640748 LILRB1Q8NHL6 650 aaPredicted RBP10.3□□□□□ -0.76
ERGIC3-220ENST00000640748 ZNF671Q8TAW3 534 aa10.3□□□□□ -0.76
ERGIC3-220ENST00000640748 SPTSSAQ969W0 71 aa10.3□□□□□ -0.76
ERGIC3-220ENST00000640748 FBXO17Q96EF6 278 aa10.3□□□□□ -0.76
ERGIC3-220ENST00000640748 PLPPR2Q96GM1 343 aa10.3□□□□□ -0.76
ERGIC3-220ENST00000640748 GMPPAQ96IJ6 420 aaPredicted RBP10.3□□□□□ -0.76
ERGIC3-220ENST00000640748 GFI1Q99684 422 aa10.3□□□□□ -0.76
ERGIC3-220ENST00000640748 SH3GL3Q99963 347 aa10.3□□□□□ -0.76
ERGIC3-220ENST00000640748 SRRQ9GZT4 340 aa10.3□□□□□ -0.76
ERGIC3-220ENST00000640748 HDHD2Q9H0R4 259 aa10.3□□□□□ -0.76
ERGIC3-220ENST00000640748 GLRX2Q9NS18 164 aa10.3□□□□□ -0.76
ERGIC3-220ENST00000640748 SLC7A10Q9NS82 523 aa10.3□□□□□ -0.76
ERGIC3-220ENST00000640748 PLEK2Q9NYT0 353 aa10.3□□□□□ -0.76
ERGIC3-220ENST00000640748 CKLFQ9UBR5 152 aa10.3□□□□□ -0.76
ERGIC3-220ENST00000640748 IFITM5A6NNB3 132 aa10.29□□□□□ -0.76
ERGIC3-220ENST00000640748 AIPO00170 330 aa10.29□□□□□ -0.76
ERGIC3-220ENST00000640748 SGCEO43556 437 aa10.29□□□□□ -0.76
ERGIC3-220ENST00000640748 SYT7O43581 403 aa10.29□□□□□ -0.76
ERGIC3-220ENST00000640748 DOK2O60496 412 aa10.29□□□□□ -0.76
ERGIC3-220ENST00000640748 MAS1P04201 325 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms