RNA–Protein interactions for RNA: ENST00000637551.2

CLN3-259, Transcript of CLN3, battenin, humanhuman

TSL 5 BASIC

Gene CLN3, Length 1,083 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-259ENST00000637551 FBN1P35555 2871 aaKnown RBP15.46■□□□□ 0.07
CLN3-259ENST00000637551 IGHV4-61A0A0C4DH41 118 aa15.46■□□□□ 0.07
CLN3-259ENST00000637551 IRGMA1A4Y4 181 aa15.46■□□□□ 0.07
CLN3-259ENST00000637551 LRRC30A6NM36 301 aa15.46■□□□□ 0.07
CLN3-259ENST00000637551 ANKRD30BLA7E2S9 258 aa15.46■□□□□ 0.07
CLN3-259ENST00000637551 TBX1O43435 398 aa15.46■□□□□ 0.07
CLN3-259ENST00000637551 ENTPD6O75354 484 aa15.46■□□□□ 0.07
CLN3-259ENST00000637551 SRSF10O75494 262 aaKnown RBP15.46■□□□□ 0.07
CLN3-259ENST00000637551 LY6G6DO95868 133 aa15.46■□□□□ 0.07
CLN3-259ENST00000637551 ISL1P61371 349 aa15.46■□□□□ 0.07
CLN3-259ENST00000637551 ACTA2P62736 377 aa15.46■□□□□ 0.07
CLN3-259ENST00000637551 ACTG2P63267 376 aa15.46■□□□□ 0.07
CLN3-259ENST00000637551 MRPL28Q13084 256 aaKnown RBP15.46■□□□□ 0.07
CLN3-259ENST00000637551 OR5AS1Q8N127 324 aa15.46■□□□□ 0.07
CLN3-259ENST00000637551 DHRSXQ8N5I4 330 aa15.46■□□□□ 0.07
CLN3-259ENST00000637551 OR8B12Q8NGG6 310 aa15.46■□□□□ 0.07
CLN3-259ENST00000637551 RNPEPL1Q9HAU8 725 aa15.46■□□□□ 0.07
CLN3-259ENST00000637551 GCM1Q9NP62 436 aa15.46■□□□□ 0.07
CLN3-259ENST00000637551 TMEM106BQ9NUM4 274 aa15.46■□□□□ 0.07
CLN3-259ENST00000637551 C14orf119Q9NWQ9 140 aa15.46■□□□□ 0.07
CLN3-259ENST00000637551 RPL36Q9Y3U8 105 aaKnown RBP15.46■□□□□ 0.07
CLN3-259ENST00000637551 SNX5Q9Y5X3 404 aa15.46■□□□□ 0.07
CLN3-259ENST00000637551 A0A1W2PQL4 384 aaPredicted RBP15.45■□□□□ 0.06
CLN3-259ENST00000637551 METTL15A6NJ78 407 aa15.45■□□□□ 0.06
CLN3-259ENST00000637551 SMAD7O15105 426 aaKnown RBP15.45■□□□□ 0.06
CLN3-259ENST00000637551 PPIHO43447 177 aaKnown RBP15.45■□□□□ 0.06
CLN3-259ENST00000637551 MTRF1O75570 445 aaKnown RBP15.45■□□□□ 0.06
CLN3-259ENST00000637551 FADS2O95864 444 aaKnown RBP15.45■□□□□ 0.06
CLN3-259ENST00000637551 CST4P01036 141 aa15.45■□□□□ 0.06
CLN3-259ENST00000637551 GSK3AP49840 483 aa15.45■□□□□ 0.06
CLN3-259ENST00000637551 IL5RAQ01344 420 aa15.45■□□□□ 0.06
CLN3-259ENST00000637551 SLC34A1Q06495 639 aa15.45■□□□□ 0.06
CLN3-259ENST00000637551 OR8G1Q15617 311 aa15.45■□□□□ 0.06
CLN3-259ENST00000637551 TMEM155Q4W5P6 130 aa15.45■□□□□ 0.06
CLN3-259ENST00000637551 ZNF691Q5VV52 312 aa15.45■□□□□ 0.06
CLN3-259ENST00000637551 CYB5R2Q6BCY4 276 aa15.45■□□□□ 0.06
CLN3-259ENST00000637551 FAM220AQ7Z4H9 259 aa15.45■□□□□ 0.06
CLN3-259ENST00000637551 ACBD7Q8N6N7 88 aa15.45■□□□□ 0.06
CLN3-259ENST00000637551 BHLHE23Q8NDY6 225 aa15.45■□□□□ 0.06
CLN3-259ENST00000637551 RAB39BQ96DA2 213 aa15.45■□□□□ 0.06
CLN3-259ENST00000637551 RNFT2Q96EX2 444 aa15.45■□□□□ 0.06
CLN3-259ENST00000637551 ADAT1Q9BUB4 502 aaKnown RBP15.45■□□□□ 0.06
CLN3-259ENST00000637551 VCX3BQ9H321 246 aa15.45■□□□□ 0.06
CLN3-259ENST00000637551 MRM2Q9UI43 246 aaKnown RBP15.45■□□□□ 0.06
CLN3-259ENST00000637551 MALRD1Q5VYJ5 2156 aa15.45■□□□□ 0.06
CLN3-259ENST00000637551 PRR32B1ATL7 298 aa15.44■□□□□ 0.06
CLN3-259ENST00000637551 LOC110117498-PIK3R3F6TDL0 507 aa15.44■□□□□ 0.06
CLN3-259ENST00000637551 IGHA1P01876 353 aa15.44■□□□□ 0.06
CLN3-259ENST00000637551 DBTP11182 482 aaKnown RBP15.44■□□□□ 0.06
CLN3-259ENST00000637551 PCMT1P22061 227 aa15.44■□□□□ 0.06
CLN3-259ENST00000637551 MAP2K3P46734 347 aa15.44■□□□□ 0.06
CLN3-259ENST00000637551 HCCSP53701 268 aa15.44■□□□□ 0.06
CLN3-259ENST00000637551 ADARB1P78563 741 aaKnown RBP15.44■□□□□ 0.06
CLN3-259ENST00000637551 ZNF91Q05481 1191 aa15.44■□□□□ 0.06
CLN3-259ENST00000637551 CDONQ4KMG0 1287 aa15.44■□□□□ 0.06
CLN3-259ENST00000637551 KLHL22Q53GT1 634 aa15.44■□□□□ 0.06
CLN3-259ENST00000637551 FDX2Q6P4F2 183 aa15.44■□□□□ 0.06
CLN3-259ENST00000637551 ELMOD2Q8IZ81 293 aa15.44■□□□□ 0.06
CLN3-259ENST00000637551 SYS1Q8N2H4 156 aa15.44■□□□□ 0.06
CLN3-259ENST00000637551 MUC20Q8N307 709 aaPredicted RBP15.44■□□□□ 0.06
CLN3-259ENST00000637551 OR10H4Q8NGA5 316 aa15.44■□□□□ 0.06
CLN3-259ENST00000637551 OR10AD1Q8NGE0 317 aa15.44■□□□□ 0.06
CLN3-259ENST00000637551 ITLN1Q8WWA0 313 aa15.44■□□□□ 0.06
CLN3-259ENST00000637551 CCL17Q92583 94 aa15.44■□□□□ 0.06
CLN3-259ENST00000637551 PBOV1Q9GZY1 135 aa15.44■□□□□ 0.06
CLN3-259ENST00000637551 ZNF319Q9P2F9 582 aa15.44■□□□□ 0.06
CLN3-259ENST00000637551 WIPI2Q9Y4P8 454 aa15.44■□□□□ 0.06
CLN3-259ENST00000637551 NPTNQ9Y639 398 aa15.44■□□□□ 0.06
CLN3-259ENST00000637551 ATRQ13535 2644 aa15.43■□□□□ 0.06
CLN3-259ENST00000637551 LYNX1G3V0Z9 82 aa15.43■□□□□ 0.06
CLN3-259ENST00000637551 CDC14BO60729 498 aa15.43■□□□□ 0.06
CLN3-259ENST00000637551 LYNX1P0DP58 116 aa15.43■□□□□ 0.06
CLN3-259ENST00000637551 CCL1P22362 96 aa15.43■□□□□ 0.06
CLN3-259ENST00000637551 RIPK1Q13546 671 aa15.43■□□□□ 0.06
CLN3-259ENST00000637551 C6orf52Q5T4I8 152 aa15.43■□□□□ 0.06
CLN3-259ENST00000637551 BCL2L15Q5TBC7 163 aa15.43■□□□□ 0.06
CLN3-259ENST00000637551 GALNT4Q8N4A0 578 aa15.43■□□□□ 0.06
CLN3-259ENST00000637551 SPICQ8N5J4 248 aa15.43■□□□□ 0.06
CLN3-259ENST00000637551 UBE2FQ969M7 185 aa15.43■□□□□ 0.06
CLN3-259ENST00000637551 C10orf35Q96D05 121 aa15.43■□□□□ 0.06
CLN3-259ENST00000637551 SIGLEC11Q96RL6 698 aa15.43■□□□□ 0.06
CLN3-259ENST00000637551 ADI1Q9BV57 179 aa15.43■□□□□ 0.06
CLN3-259ENST00000637551 FN3KRPQ9HA64 309 aa15.43■□□□□ 0.06
CLN3-259ENST00000637551 TRIM36Q9NQ86 728 aa15.43■□□□□ 0.06
CLN3-259ENST00000637551 G6PC2Q9NQR9 355 aa15.43■□□□□ 0.06
CLN3-259ENST00000637551 NBEAL1Q6ZS30 2694 aa15.43■□□□□ 0.06
CLN3-259ENST00000637551 C5orf63A6NC05 138 aa15.42■□□□□ 0.06
CLN3-259ENST00000637551 TMEM210A6NLX4 147 aa15.42■□□□□ 0.06
CLN3-259ENST00000637551 ANXA2P2A6NMY6 339 aa15.42■□□□□ 0.06
CLN3-259ENST00000637551 B4DSR2 109 aa15.42■□□□□ 0.06
CLN3-259ENST00000637551 ANKRD65E5RJM6 399 aa15.42■□□□□ 0.06
CLN3-259ENST00000637551 TMEM178BH3BS89 294 aa15.42■□□□□ 0.06
CLN3-259ENST00000637551 DHRS3O75911 302 aa15.42■□□□□ 0.06
CLN3-259ENST00000637551 TTRP02766 147 aa15.42■□□□□ 0.06
CLN3-259ENST00000637551 IGHV4-31P0DP07 118 aa15.42■□□□□ 0.06
CLN3-259ENST00000637551 ZNF12P17014 697 aa15.42■□□□□ 0.06
CLN3-259ENST00000637551 CA6P23280 308 aa15.42■□□□□ 0.06
CLN3-259ENST00000637551 ANOS1P23352 680 aa15.42■□□□□ 0.06
CLN3-259ENST00000637551 CFHR2P36980 270 aa15.42■□□□□ 0.06
CLN3-259ENST00000637551 GNALP38405 381 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms