RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 APOA1P02647 267 aa10.84□□□□□ -0.67
CTSD-208ENST00000636843 GDI2P50395 445 aaKnown RBP10.84□□□□□ -0.67
CTSD-208ENST00000636843 POU3F1Q03052 451 aaPredicted RBP10.84□□□□□ -0.67
CTSD-208ENST00000636843 INSL4Q14641 139 aa10.84□□□□□ -0.67
CTSD-208ENST00000636843 ACSM3Q53FZ2 586 aa10.84□□□□□ -0.67
CTSD-208ENST00000636843 FAM131AQ6UXB0 335 aa10.84□□□□□ -0.67
CTSD-208ENST00000636843 H1FNTQ75WM6 255 aaPredicted RBP10.84□□□□□ -0.67
CTSD-208ENST00000636843 FAM220AQ7Z4H9 259 aa10.84□□□□□ -0.67
CTSD-208ENST00000636843 CEACAM19Q7Z692 300 aa10.84□□□□□ -0.67
CTSD-208ENST00000636843 MDP1Q86V88 176 aa10.84□□□□□ -0.67
CTSD-208ENST00000636843 MYPOPQ86VE0 399 aaPredicted RBP10.84□□□□□ -0.67
CTSD-208ENST00000636843 TIGD4Q8IY51 512 aa10.84□□□□□ -0.67
CTSD-208ENST00000636843 RFLNBQ8N5W9 214 aa10.84□□□□□ -0.67
CTSD-208ENST00000636843 SCAIQ8N9R8 606 aa10.84□□□□□ -0.67
CTSD-208ENST00000636843 LINC01356Q8N9X3 169 aa10.84□□□□□ -0.67
CTSD-208ENST00000636843 ADPRHL1Q8NDY3 354 aa10.84□□□□□ -0.67
CTSD-208ENST00000636843 ZNF417Q8TAU3 575 aa10.84□□□□□ -0.67
CTSD-208ENST00000636843 ZNF519Q8TB69 540 aa10.84□□□□□ -0.67
CTSD-208ENST00000636843 RPS4Y2Q8TD47 263 aa10.84□□□□□ -0.67
CTSD-208ENST00000636843 UBASH3BQ8TF42 649 aa10.84□□□□□ -0.67
CTSD-208ENST00000636843 GHSRQ92847 366 aa10.84□□□□□ -0.67
CTSD-208ENST00000636843 OR2M2Q96R28 347 aa10.84□□□□□ -0.67
CTSD-208ENST00000636843 ZNF587Q96SQ5 575 aaPredicted RBP10.84□□□□□ -0.67
CTSD-208ENST00000636843 SOX7Q9BT81 388 aa10.84□□□□□ -0.67
CTSD-208ENST00000636843 MARCH7Q9H992 704 aa10.84□□□□□ -0.67
CTSD-208ENST00000636843 SRA1Q9HD15 236 aaKnown RBP10.84□□□□□ -0.67
CTSD-208ENST00000636843 DYNLRB1Q9NP97 96 aa10.84□□□□□ -0.67
CTSD-208ENST00000636843 RHBDL2Q9NX52 303 aa10.84□□□□□ -0.67
CTSD-208ENST00000636843 TRAV1-2A0A0B4J238 106 aa10.84□□□□□ -0.67
CTSD-208ENST00000636843 TRBV2A0A0J9YWF9 115 aa10.84□□□□□ -0.67
CTSD-208ENST00000636843 A0A1W2PRG6 482 aa10.84□□□□□ -0.67
CTSD-208ENST00000636843 NPIPB13A6NJU9 1138 aa10.84□□□□□ -0.67
CTSD-208ENST00000636843 NPIPB4C9JG80 1138 aa10.84□□□□□ -0.67
CTSD-208ENST00000636843 C11orf98E9PRG8 122 aa10.84□□□□□ -0.67
CTSD-208ENST00000636843 ARL6IP5O75915 188 aa10.84□□□□□ -0.67
CTSD-208ENST00000636843 APEX1P27695 318 aaKnown RBP10.84□□□□□ -0.67
CTSD-208ENST00000636843 EVX1P49640 407 aa10.84□□□□□ -0.67
CTSD-208ENST00000636843 CAV3P56539 151 aa10.84□□□□□ -0.67
CTSD-208ENST00000636843 SRSF2Q01130 221 aaKnown RBP10.84□□□□□ -0.67
CTSD-208ENST00000636843 RIN1Q13671 783 aa10.84□□□□□ -0.67
CTSD-208ENST00000636843 ZNF79Q15937 498 aa10.84□□□□□ -0.67
CTSD-208ENST00000636843 ZNF684Q5T5D7 378 aa10.84□□□□□ -0.67
CTSD-208ENST00000636843 TMEM123Q8N131 208 aa10.84□□□□□ -0.67
CTSD-208ENST00000636843 OR6V1Q8N148 313 aa10.84□□□□□ -0.67
CTSD-208ENST00000636843 OR8H2Q8N162 312 aa10.84□□□□□ -0.67
CTSD-208ENST00000636843 ZCCHC24Q8N2G6 241 aaKnown RBP10.84□□□□□ -0.67
CTSD-208ENST00000636843 ZNF511Q8NB15 262 aa10.84□□□□□ -0.67
CTSD-208ENST00000636843 ZNF837Q96EG3 531 aaPredicted RBP10.84□□□□□ -0.67
CTSD-208ENST00000636843 C1orf159Q96HA4 380 aa10.84□□□□□ -0.67
CTSD-208ENST00000636843 WDR76Q9H967 626 aa10.84□□□□□ -0.67
CTSD-208ENST00000636843 B3GNT2Q9NY97 397 aa10.84□□□□□ -0.67
CTSD-208ENST00000636843 VSX1Q9NZR4 365 aaPredicted RBP10.84□□□□□ -0.67
CTSD-208ENST00000636843 COMMD3Q9UBI1 195 aa10.84□□□□□ -0.67
CTSD-208ENST00000636843 GRIP1Q9Y3R0 1128 aa10.84□□□□□ -0.67
CTSD-208ENST00000636843 SMIM30A4D0T7 59 aa10.83□□□□□ -0.68
CTSD-208ENST00000636843 PRSS37A4D1T9 235 aa10.83□□□□□ -0.68
CTSD-208ENST00000636843 ZNF503-AS2A6NEH8 195 aa10.83□□□□□ -0.68
CTSD-208ENST00000636843 A6NIZ1 184 aa10.83□□□□□ -0.68
CTSD-208ENST00000636843 TRAF3IP2O43734 574 aaPredicted RBP10.83□□□□□ -0.68
CTSD-208ENST00000636843 IFNGR1P15260 489 aa10.83□□□□□ -0.68
CTSD-208ENST00000636843 AHCYP23526 432 aa10.83□□□□□ -0.68
CTSD-208ENST00000636843 SRP14P37108 136 aaKnown RBP10.83□□□□□ -0.68
CTSD-208ENST00000636843 RAP1BP61224 184 aa10.83□□□□□ -0.68
CTSD-208ENST00000636843 RAP1AP62834 184 aa10.83□□□□□ -0.68
CTSD-208ENST00000636843 EGR3Q06889 387 aa10.83□□□□□ -0.68
CTSD-208ENST00000636843 SNTB2Q13425 540 aaKnown RBP10.83□□□□□ -0.68
CTSD-208ENST00000636843 ZMAT1Q5H9K5 638 aa10.83□□□□□ -0.68
CTSD-208ENST00000636843 FAM205BPQ63HN1 556 aa10.83□□□□□ -0.68
CTSD-208ENST00000636843 UEVLDQ8IX04 471 aa10.83□□□□□ -0.68
CTSD-208ENST00000636843 C20orf196Q8IYI0 205 aa10.83□□□□□ -0.68
CTSD-208ENST00000636843 TSSK2Q96PF2 358 aa10.83□□□□□ -0.68
CTSD-208ENST00000636843 INTS14Q96SY0 518 aa10.83□□□□□ -0.68
CTSD-208ENST00000636843 TTTY10Q9BZA0 68 aa10.83□□□□□ -0.68
CTSD-208ENST00000636843 SYT4Q9H2B2 425 aa10.83□□□□□ -0.68
CTSD-208ENST00000636843 NOX3Q9HBY0 568 aa10.83□□□□□ -0.68
CTSD-208ENST00000636843 B3GAT2Q9NPZ5 323 aa10.83□□□□□ -0.68
CTSD-208ENST00000636843 POLE4Q9NR33 117 aa10.83□□□□□ -0.68
CTSD-208ENST00000636843 LAMP5Q9UJQ1 280 aa10.83□□□□□ -0.68
CTSD-208ENST00000636843 SPEF1Q9Y4P9 236 aa10.83□□□□□ -0.68
CTSD-208ENST00000636843 ANKRD61A6NGH8 418 aa10.82□□□□□ -0.68
CTSD-208ENST00000636843 CENPBD1B2RD01 187 aa10.82□□□□□ -0.68
CTSD-208ENST00000636843 DCTN6O00399 190 aa10.82□□□□□ -0.68
CTSD-208ENST00000636843 TCF21O43680 179 aa10.82□□□□□ -0.68
CTSD-208ENST00000636843 SYNGR3O43761 229 aa10.82□□□□□ -0.68
CTSD-208ENST00000636843 NCR1O76036 304 aa10.82□□□□□ -0.68
CTSD-208ENST00000636843 KRT8P05787 483 aa10.82□□□□□ -0.68
CTSD-208ENST00000636843 HNRNPCP07910 306 aaKnown RBP eCLIP10.82□□□□□ -0.68
CTSD-208ENST00000636843 UCHL1P09936 223 aa10.82□□□□□ -0.68
CTSD-208ENST00000636843 CRABP1P29762 137 aa10.82□□□□□ -0.68
CTSD-208ENST00000636843 IL2RGP31785 369 aa10.82□□□□□ -0.68
CTSD-208ENST00000636843 SCN1BQ07699 218 aa10.82□□□□□ -0.68
CTSD-208ENST00000636843 PUDPQ08623 228 aa10.82□□□□□ -0.68
CTSD-208ENST00000636843 LYPD4Q6UWN0 246 aa10.82□□□□□ -0.68
CTSD-208ENST00000636843 UNQ9370/PRO34162Q6UXP9 181 aa10.82□□□□□ -0.68
CTSD-208ENST00000636843 ZNF627Q7L945 461 aa10.82□□□□□ -0.68
CTSD-208ENST00000636843 DRAXINQ8NBI3 349 aaPredicted RBP10.82□□□□□ -0.68
CTSD-208ENST00000636843 SOSTQ9BQB4 213 aa10.82□□□□□ -0.68
CTSD-208ENST00000636843 ACOXLQ9NUZ1 547 aa10.82□□□□□ -0.68
CTSD-208ENST00000636843 B9D1Q9UPM9 204 aa10.82□□□□□ -0.68
CTSD-208ENST00000636843 ZNF879B4DU55 563 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms