RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 A0A1B0GVG6 124 aa16.11■□□□□ 0.17
CACNA1A-227ENST00000636549 RAB19A4D1S5 217 aa16.11■□□□□ 0.17
CACNA1A-227ENST00000636549 ADPRHL1Q8NDY3 354 aa16.11■□□□□ 0.17
CACNA1A-227ENST00000636549 C16orf52Q8NHV5 167 aa16.11■□□□□ 0.17
CACNA1A-227ENST00000636549 RGPD2P0DJD1 1756 aa16.1■□□□□ 0.17
CACNA1A-227ENST00000636549 MBLAC1A4D2B0 266 aaPredicted RBP16.1■□□□□ 0.17
CACNA1A-227ENST00000636549 CCL21O00585 134 aa16.1■□□□□ 0.17
CACNA1A-227ENST00000636549 BMI1P35226 326 aa16.1■□□□□ 0.17
CACNA1A-227ENST00000636549 OR2B8PP59922 312 aa16.1■□□□□ 0.17
CACNA1A-227ENST00000636549 ZNF787Q6DD87 383 aa16.1■□□□□ 0.17
CACNA1A-227ENST00000636549 BCL2L2Q92843 193 aaPredicted RBP16.1■□□□□ 0.17
CACNA1A-227ENST00000636549 ACTR3CQ9C0K3 210 aaPredicted RBP16.1■□□□□ 0.17
CACNA1A-227ENST00000636549 RHBDL1O75783 438 aa16.1■□□□□ 0.17
CACNA1A-227ENST00000636549 CSN3P07498 182 aa16.1■□□□□ 0.17
CACNA1A-227ENST00000636549 TMIGD3P0DMS9 266 aaPredicted RBP16.1■□□□□ 0.17
CACNA1A-227ENST00000636549 NPPBP16860 134 aa16.1■□□□□ 0.17
CACNA1A-227ENST00000636549 FA2HQ7L5A8 372 aa16.1■□□□□ 0.17
CACNA1A-227ENST00000636549 ARRDC2Q8TBH0 407 aa16.1■□□□□ 0.17
CACNA1A-227ENST00000636549 RAB1BQ9H0U4 201 aa16.1■□□□□ 0.17
CACNA1A-227ENST00000636549 WASHC3Q9Y3C0 194 aa16.1■□□□□ 0.17
CACNA1A-227ENST00000636549 TUBAL3A6NHL2 446 aa16.1■□□□□ 0.17
CACNA1A-227ENST00000636549 ETV1P50549 477 aa16.1■□□□□ 0.17
CACNA1A-227ENST00000636549 MYOZ1Q9NP98 299 aaPredicted RBP16.1■□□□□ 0.17
CACNA1A-227ENST00000636549 MED17Q9NVC6 651 aa16.1■□□□□ 0.17
CACNA1A-227ENST00000636549 DOT1LQ8TEK3 1739 aa16.1■□□□□ 0.17
CACNA1A-227ENST00000636549 SP6Q3SY56 376 aa16.1■□□□□ 0.17
CACNA1A-227ENST00000636549 FNDC7Q5VTL7 733 aa16.1■□□□□ 0.17
CACNA1A-227ENST00000636549 ZNF534Q76KX8 674 aa16.1■□□□□ 0.17
CACNA1A-227ENST00000636549 SLC38A9Q8NBW4 561 aa16.1■□□□□ 0.17
CACNA1A-227ENST00000636549 GABARAPL1Q9H0R8 117 aa16.1■□□□□ 0.17
CACNA1A-227ENST00000636549 KPTNQ9Y664 436 aa16.1■□□□□ 0.17
CACNA1A-227ENST00000636549 LIMK1P53667 647 aa16.1■□□□□ 0.17
CACNA1A-227ENST00000636549 ZNF239Q16600 458 aaKnown RBP16.1■□□□□ 0.17
CACNA1A-227ENST00000636549 RPP25Q9BUL9 199 aaKnown RBP16.1■□□□□ 0.17
CACNA1A-227ENST00000636549 CLEC18AA5D8T8 446 aa16.09■□□□□ 0.17
CACNA1A-227ENST00000636549 CHRM2P08172 466 aa16.09■□□□□ 0.17
CACNA1A-227ENST00000636549 OR4A8P0C604 315 aa16.09■□□□□ 0.17
CACNA1A-227ENST00000636549 ZDHHC11BP0C7U3 371 aa16.09■□□□□ 0.17
CACNA1A-227ENST00000636549 COX6B1P14854 86 aa16.09■□□□□ 0.17
CACNA1A-227ENST00000636549 HTR1FP30939 366 aa16.09■□□□□ 0.17
CACNA1A-227ENST00000636549 SNRPGP62308 76 aaKnown RBP16.09■□□□□ 0.17
CACNA1A-227ENST00000636549 CLEC18CQ8NCF0 446 aa16.09■□□□□ 0.17
CACNA1A-227ENST00000636549 OR2V1Q8NHB1 315 aa16.09■□□□□ 0.17
CACNA1A-227ENST00000636549 MMP25Q9NPA2 562 aa16.09■□□□□ 0.17
CACNA1A-227ENST00000636549 FBXO34Q9NWN3 711 aa16.09■□□□□ 0.17
CACNA1A-227ENST00000636549 EIF3FO00303 357 aaPredicted RBP16.09■□□□□ 0.17
CACNA1A-227ENST00000636549 SMIM21Q3B7S5 101 aa16.09■□□□□ 0.17
CACNA1A-227ENST00000636549 RSPO2Q6UXX9 243 aaPredicted RBP16.09■□□□□ 0.17
CACNA1A-227ENST00000636549 TMUB2Q71RG4 321 aa16.09■□□□□ 0.17
CACNA1A-227ENST00000636549 OR52B4Q8NGK2 314 aa16.09■□□□□ 0.17
CACNA1A-227ENST00000636549 OR2A1Q8NGT9 310 aa16.09■□□□□ 0.17
CACNA1A-227ENST00000636549 CNTD2Q9H8S5 307 aa16.09■□□□□ 0.17
CACNA1A-227ENST00000636549 PRDM7Q9NQW5 492 aa16.09■□□□□ 0.17
CACNA1A-227ENST00000636549 TRAV34A0A0B4J273 112 aa16.09■□□□□ 0.17
CACNA1A-227ENST00000636549 THEM4Q5T1C6 240 aa16.09■□□□□ 0.17
CACNA1A-227ENST00000636549 NRARPQ7Z6K4 114 aa16.09■□□□□ 0.17
CACNA1A-227ENST00000636549 LSRQ86X29 649 aaPredicted RBP16.09■□□□□ 0.17
CACNA1A-227ENST00000636549 PDGFBP01127 241 aaPredicted RBP16.09■□□□□ 0.17
CACNA1A-227ENST00000636549 Q3ZCU0 254 aa16.09■□□□□ 0.17
CACNA1A-227ENST00000636549 PAQR6Q6TCH4 344 aa16.09■□□□□ 0.17
CACNA1A-227ENST00000636549 OXGR1Q96P68 337 aa16.09■□□□□ 0.17
CACNA1A-227ENST00000636549 DDOQ99489 341 aa16.09■□□□□ 0.17
CACNA1A-227ENST00000636549 LRRC61Q9BV99 259 aa16.09■□□□□ 0.17
CACNA1A-227ENST00000636549 EMCNQ9ULC0 261 aa16.09■□□□□ 0.17
CACNA1A-227ENST00000636549 MS4A6EQ96DS6 147 aa16.09■□□□□ 0.17
CACNA1A-227ENST00000636549 BTF3L4Q96K17 158 aa16.09■□□□□ 0.17
CACNA1A-227ENST00000636549 MS4A7Q9GZW8 240 aaPredicted RBP16.09■□□□□ 0.17
CACNA1A-227ENST00000636549 UCK1Q9HA47 277 aa16.09■□□□□ 0.17
CACNA1A-227ENST00000636549 SHPRHQ149N8 1683 aa16.09■□□□□ 0.17
CACNA1A-227ENST00000636549 PCBP4P57723 403 aaKnown RBP16.08■□□□□ 0.17
CACNA1A-227ENST00000636549 SRPXP78539 464 aa16.08■□□□□ 0.17
CACNA1A-227ENST00000636549 TMEM52BQ4KMG9 183 aa16.08■□□□□ 0.17
CACNA1A-227ENST00000636549 TTC9Q92623 222 aa16.08■□□□□ 0.17
CACNA1A-227ENST00000636549 TOX2Q96NM4 488 aa16.08■□□□□ 0.17
CACNA1A-227ENST00000636549 TMPRSS5Q9H3S3 457 aa16.08■□□□□ 0.17
CACNA1A-227ENST00000636549 ZNF696Q9H7X3 374 aa16.08■□□□□ 0.17
CACNA1A-227ENST00000636549 ZNF727A8MUV8 499 aa16.08■□□□□ 0.17
CACNA1A-227ENST00000636549 FCN2Q15485 313 aa16.08■□□□□ 0.17
CACNA1A-227ENST00000636549 GGNBP1Q5YKI7 109 aa16.08■□□□□ 0.17
CACNA1A-227ENST00000636549 ZNF841Q6ZN19 808 aa16.08■□□□□ 0.17
CACNA1A-227ENST00000636549 FCRL1Q96LA6 429 aa16.08■□□□□ 0.17
CACNA1A-227ENST00000636549 GDF2Q9UK05 429 aaPredicted RBP16.08■□□□□ 0.17
CACNA1A-227ENST00000636549 MN1Q10571 1320 aaPredicted RBP16.08■□□□□ 0.17
CACNA1A-227ENST00000636549 SERPINE3A8MV23 424 aa16.08■□□□□ 0.16
CACNA1A-227ENST00000636549 PLRG1O43660 514 aaKnown RBP16.08■□□□□ 0.16
CACNA1A-227ENST00000636549 CST7O76096 145 aa16.08■□□□□ 0.16
CACNA1A-227ENST00000636549 SBK3P0C264 359 aa16.08■□□□□ 0.16
CACNA1A-227ENST00000636549 METAP1P53582 386 aa16.08■□□□□ 0.16
CACNA1A-227ENST00000636549 ETV3LQ6ZN32 361 aa16.08■□□□□ 0.16
CACNA1A-227ENST00000636549 UBALD2Q8IYN6 164 aa16.08■□□□□ 0.16
CACNA1A-227ENST00000636549 GEMIN2O14893 280 aaKnown RBP16.08■□□□□ 0.16
CACNA1A-227ENST00000636549 ADAM20O43506 726 aa16.08■□□□□ 0.16
CACNA1A-227ENST00000636549 TBCEQ15813 527 aaPredicted RBP16.08■□□□□ 0.16
CACNA1A-227ENST00000636549 MRGPRDQ8TDS7 321 aa16.08■□□□□ 0.16
CACNA1A-227ENST00000636549 RASL11BQ9BPW5 248 aa16.08■□□□□ 0.16
CACNA1A-227ENST00000636549 ICMTO60725 284 aa16.08■□□□□ 0.16
CACNA1A-227ENST00000636549 FAM3AP98173 230 aa16.08■□□□□ 0.16
CACNA1A-227ENST00000636549 RTN4RL1Q86UN2 441 aaPredicted RBP16.08■□□□□ 0.16
CACNA1A-227ENST00000636549 NRG4Q8WWG1 115 aa16.08■□□□□ 0.16
CACNA1A-227ENST00000636549 TM4SF19Q96DZ7 209 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms