RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 ELOA3Q8NG57 546 aa13.69□□□□□ -0.22
CLN8-209ENST00000635970 TMEM41AQ96HV5 264 aa13.69□□□□□ -0.22
CLN8-209ENST00000635970 TBL1XR1Q9BZK7 514 aa13.69□□□□□ -0.22
CLN8-209ENST00000635970 LIPGQ9Y5X9 500 aa13.69□□□□□ -0.22
CLN8-209ENST00000635970 BLOC1S5-TXNDC5H3BN57 136 aa13.69□□□□□ -0.22
CLN8-209ENST00000635970 GMFGO60234 142 aa13.69□□□□□ -0.22
CLN8-209ENST00000635970 CD37P11049 281 aa13.69□□□□□ -0.22
CLN8-209ENST00000635970 AQP2P41181 271 aa13.69□□□□□ -0.22
CLN8-209ENST00000635970 CD226Q15762 336 aa13.69□□□□□ -0.22
CLN8-209ENST00000635970 DUSP19Q8WTR2 217 aa13.69□□□□□ -0.22
CLN8-209ENST00000635970 MARC2Q969Z3 335 aa13.69□□□□□ -0.22
CLN8-209ENST00000635970 C4orf45Q96LM5 186 aa13.69□□□□□ -0.22
CLN8-209ENST00000635970 DEFB127Q9H1M4 99 aa13.69□□□□□ -0.22
CLN8-209ENST00000635970 UBQLN4Q9NRR5 601 aa13.69□□□□□ -0.22
CLN8-209ENST00000635970 KLHDC2Q9Y2U9 406 aa13.69□□□□□ -0.22
CLN8-209ENST00000635970 ZGRF1Q86YA3 2104 aa13.68□□□□□ -0.22
CLN8-209ENST00000635970 IGKV1D-42A0A075B6H8 117 aa13.68□□□□□ -0.22
CLN8-209ENST00000635970 MEGF11A6BM72 1044 aa13.68□□□□□ -0.22
CLN8-209ENST00000635970 OR14I1A6ND48 311 aa13.68□□□□□ -0.22
CLN8-209ENST00000635970 H7C2Y5 167 aa13.68□□□□□ -0.22
CLN8-209ENST00000635970 CD74P04233 296 aa13.68□□□□□ -0.22
CLN8-209ENST00000635970 ASAH2BP0C7U1 165 aa13.68□□□□□ -0.22
CLN8-209ENST00000635970 DEFA5Q01523 94 aa13.68□□□□□ -0.22
CLN8-209ENST00000635970 MEF2DQ14814 521 aa13.68□□□□□ -0.22
CLN8-209ENST00000635970 EEF1A1P5Q5VTE0 462 aa13.68□□□□□ -0.22
CLN8-209ENST00000635970 C17orf107Q6ZR85 190 aa13.68□□□□□ -0.22
CLN8-209ENST00000635970 PGAP1Q75T13 922 aa13.68□□□□□ -0.22
CLN8-209ENST00000635970 STEAP2Q8NFT2 490 aa13.68□□□□□ -0.22
CLN8-209ENST00000635970 OR1J4Q8NGS1 313 aa13.68□□□□□ -0.22
CLN8-209ENST00000635970 PTX4Q96A99 478 aa13.68□□□□□ -0.22
CLN8-209ENST00000635970 ARSGQ96EG1 525 aa13.68□□□□□ -0.22
CLN8-209ENST00000635970 ZNF587Q96SQ5 575 aaPredicted RBP13.68□□□□□ -0.22
CLN8-209ENST00000635970 INTS14Q96SY0 518 aa13.68□□□□□ -0.22
CLN8-209ENST00000635970 PPP4R1LQ9P1A2 415 aa13.68□□□□□ -0.22
CLN8-209ENST00000635970 FAM171A2A8MVW0 826 aa13.67□□□□□ -0.22
CLN8-209ENST00000635970 ALG1L2C9J202 215 aa13.67□□□□□ -0.22
CLN8-209ENST00000635970 SCDO00767 359 aa13.67□□□□□ -0.22
CLN8-209ENST00000635970 NUPL2O15504 423 aaKnown RBP13.67□□□□□ -0.22
CLN8-209ENST00000635970 ITGA5P08648 1049 aa13.67□□□□□ -0.22
CLN8-209ENST00000635970 HPGDP15428 266 aa13.67□□□□□ -0.22
CLN8-209ENST00000635970 MPZP25189 248 aa13.67□□□□□ -0.22
CLN8-209ENST00000635970 GDF1P27539 372 aa13.67□□□□□ -0.22
CLN8-209ENST00000635970 UQCRFS1P47985 274 aa13.67□□□□□ -0.22
CLN8-209ENST00000635970 HOXA1P49639 335 aaPredicted RBP13.67□□□□□ -0.22
CLN8-209ENST00000635970 MRPL49Q13405 166 aaKnown RBP13.67□□□□□ -0.22
CLN8-209ENST00000635970 HYAL4Q2M3T9 481 aa13.67□□□□□ -0.22
CLN8-209ENST00000635970 ATRAIDQ6UW56 229 aa13.67□□□□□ -0.22
CLN8-209ENST00000635970 ATG4DQ86TL0 474 aaPredicted RBP13.67□□□□□ -0.22
CLN8-209ENST00000635970 SVBPQ8N300 66 aa13.67□□□□□ -0.22
CLN8-209ENST00000635970 TSEN15Q8WW01 171 aaKnown RBP13.67□□□□□ -0.22
CLN8-209ENST00000635970 SEH1LQ96EE3 360 aa13.67□□□□□ -0.22
CLN8-209ENST00000635970 CHST6Q9GZX3 395 aa13.67□□□□□ -0.22
CLN8-209ENST00000635970 ATG5Q9H1Y0 275 aa13.67□□□□□ -0.22
CLN8-209ENST00000635970 ZDHHC11Q9H8X9 412 aa13.67□□□□□ -0.22
CLN8-209ENST00000635970 SLC2A8Q9NY64 477 aa13.67□□□□□ -0.22
CLN8-209ENST00000635970 CKLFQ9UBR5 152 aa13.67□□□□□ -0.22
CLN8-209ENST00000635970 DNAJC13O75165 2243 aa13.67□□□□□ -0.22
CLN8-209ENST00000635970 EIF1AYO14602 144 aaKnown RBP13.67□□□□□ -0.22
CLN8-209ENST00000635970 DOK2O60496 412 aa13.67□□□□□ -0.22
CLN8-209ENST00000635970 ATG12O94817 140 aa13.67□□□□□ -0.22
CLN8-209ENST00000635970 CYB5AP00167 134 aa13.67□□□□□ -0.22
CLN8-209ENST00000635970 EIF1AXP47813 144 aaKnown RBP13.67□□□□□ -0.22
CLN8-209ENST00000635970 EFNB2P52799 333 aa13.67□□□□□ -0.22
CLN8-209ENST00000635970 UBE2MP61081 183 aaKnown RBP13.67□□□□□ -0.22
CLN8-209ENST00000635970 SNTB1Q13884 538 aaKnown RBP13.67□□□□□ -0.22
CLN8-209ENST00000635970 KLHL26Q53HC5 615 aa13.67□□□□□ -0.22
CLN8-209ENST00000635970 TEX30Q5JUR7 227 aa13.67□□□□□ -0.22
CLN8-209ENST00000635970 SHEQ5VZ18 495 aa13.67□□□□□ -0.22
CLN8-209ENST00000635970 FAHD2BQ6P2I3 314 aaPredicted RBP13.67□□□□□ -0.22
CLN8-209ENST00000635970 PRSS35Q8N3Z0 413 aa13.67□□□□□ -0.22
CLN8-209ENST00000635970 BPIFCQ8NFQ6 507 aa13.67□□□□□ -0.22
CLN8-209ENST00000635970 OR6N2Q8NGY6 317 aa13.67□□□□□ -0.22
CLN8-209ENST00000635970 OTOSQ8NHW6 89 aa13.67□□□□□ -0.22
CLN8-209ENST00000635970 FAHD2AQ96GK7 314 aa13.67□□□□□ -0.22
CLN8-209ENST00000635970 KLHDC3Q9BQ90 382 aa13.67□□□□□ -0.22
CLN8-209ENST00000635970 TMEM185BQ9H7F4 350 aa13.67□□□□□ -0.22
CLN8-209ENST00000635970 SRA1Q9HD15 236 aaKnown RBP13.67□□□□□ -0.22
CLN8-209ENST00000635970 DISC1C4P0D8 188 aa13.66□□□□□ -0.22
CLN8-209ENST00000635970 CD2P06729 351 aa13.66□□□□□ -0.22
CLN8-209ENST00000635970 PLA2G2AP14555 144 aa13.66□□□□□ -0.22
CLN8-209ENST00000635970 HOXB1P14653 301 aaPredicted RBP13.66□□□□□ -0.22
CLN8-209ENST00000635970 CD34P28906 385 aa13.66□□□□□ -0.22
CLN8-209ENST00000635970 FOXK1P85037 733 aa13.66□□□□□ -0.22
CLN8-209ENST00000635970 GUCA2AQ02747 115 aa13.66□□□□□ -0.22
CLN8-209ENST00000635970 PLA2G7Q13093 441 aa13.66□□□□□ -0.22
CLN8-209ENST00000635970 C10orf53Q8N6V4 93 aa13.66□□□□□ -0.22
CLN8-209ENST00000635970 RELL2Q8NC24 303 aaPredicted RBP13.66□□□□□ -0.22
CLN8-209ENST00000635970 OR8B4Q96RC9 309 aa13.66□□□□□ -0.22
CLN8-209ENST00000635970 PRRT1Q99946 306 aa13.66□□□□□ -0.22
CLN8-209ENST00000635970 FKRPQ9H9S5 495 aa13.66□□□□□ -0.22
CLN8-209ENST00000635970 B4GALT7Q9UBV7 327 aa13.66□□□□□ -0.22
CLN8-209ENST00000635970 PLEKHA6Q9Y2H5 1048 aa13.66□□□□□ -0.22
CLN8-209ENST00000635970 HEATR5AQ86XA9 2040 aa13.66□□□□□ -0.22
CLN8-209ENST00000635970 MED12Q93074 2177 aa13.65□□□□□ -0.22
CLN8-209ENST00000635970 ZNF736B4DX44 427 aaPredicted RBP13.65□□□□□ -0.22
CLN8-209ENST00000635970 OIP5O43482 229 aa13.65□□□□□ -0.22
CLN8-209ENST00000635970 TRAPPC6AO75865 159 aa13.65□□□□□ -0.22
CLN8-209ENST00000635970 PLATP00750 562 aa13.65□□□□□ -0.22
CLN8-209ENST00000635970 EDN3P14138 238 aa13.65□□□□□ -0.22
CLN8-209ENST00000635970 FSTP19883 344 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms