RNA–Protein interactions for RNA: ENST00000625778.2

UBE3A-209, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 3,217 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-209ENST00000625778 ZNF701Q9NV72 531 aaPredicted RBP12.35□□□□□ -0.43
UBE3A-209ENST00000625778 PISDQ9UG56 409 aa12.35□□□□□ -0.43
UBE3A-209ENST00000625778 FBXO7Q9Y3I1 522 aa12.35□□□□□ -0.43
UBE3A-209ENST00000625778 WIF1Q9Y5W5 379 aa12.35□□□□□ -0.43
UBE3A-209ENST00000625778 PRUNE2Q8WUY3 3088 aa12.35□□□□□ -0.43
UBE3A-209ENST00000625778 GP1BBP13224 206 aa12.35□□□□□ -0.43
UBE3A-209ENST00000625778 ZNF20P17024 532 aa12.35□□□□□ -0.43
UBE3A-209ENST00000625778 COL9A1P20849 921 aa12.35□□□□□ -0.43
UBE3A-209ENST00000625778 HSD17B7P56937 341 aa12.35□□□□□ -0.43
UBE3A-209ENST00000625778 TEX30Q5JUR7 227 aa12.35□□□□□ -0.43
UBE3A-209ENST00000625778 NAXEQ8NCW5 288 aa12.35□□□□□ -0.43
UBE3A-209ENST00000625778 RAB3CQ96E17 227 aa12.35□□□□□ -0.43
UBE3A-209ENST00000625778 C5orf34Q96MH7 638 aa12.35□□□□□ -0.43
UBE3A-209ENST00000625778 SMOC1Q9H4F8 434 aa12.35□□□□□ -0.43
UBE3A-209ENST00000625778 LANCL2Q9NS86 450 aa12.35□□□□□ -0.43
UBE3A-209ENST00000625778 BTBD17A6NE02 478 aa12.35□□□□□ -0.43
UBE3A-209ENST00000625778 ZNF93P35789 620 aaPredicted RBP12.35□□□□□ -0.43
UBE3A-209ENST00000625778 CX3CR1P49238 355 aa12.35□□□□□ -0.43
UBE3A-209ENST00000625778 CSNK2A1P68400 391 aaPredicted RBP12.35□□□□□ -0.43
UBE3A-209ENST00000625778 ECH1Q13011 328 aa12.35□□□□□ -0.43
UBE3A-209ENST00000625778 IAH1Q2TAA2 248 aaPredicted RBP12.35□□□□□ -0.43
UBE3A-209ENST00000625778 TMEM196Q5HYL7 178 aa12.35□□□□□ -0.43
UBE3A-209ENST00000625778 PRSS54Q6PEW0 395 aa12.35□□□□□ -0.43
UBE3A-209ENST00000625778 KLHL24Q6TFL4 600 aa12.35□□□□□ -0.43
UBE3A-209ENST00000625778 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.35□□□□□ -0.43
UBE3A-209ENST00000625778 SKA3Q8IX90 412 aa12.35□□□□□ -0.43
UBE3A-209ENST00000625778 CSNK2A3Q8NEV1 391 aa12.35□□□□□ -0.43
UBE3A-209ENST00000625778 SLC26A10Q8NG04 563 aa12.35□□□□□ -0.43
UBE3A-209ENST00000625778 OR51E1Q8TCB6 317 aa12.35□□□□□ -0.43
UBE3A-209ENST00000625778 THAP3Q8WTV1 239 aaPredicted RBP12.35□□□□□ -0.43
UBE3A-209ENST00000625778 MYOZ1Q9NP98 299 aaPredicted RBP12.35□□□□□ -0.43
UBE3A-209ENST00000625778 EHFQ9NZC4 300 aa12.35□□□□□ -0.43
UBE3A-209ENST00000625778 TMEM184BQ9Y519 407 aaPredicted RBP12.35□□□□□ -0.43
UBE3A-209ENST00000625778 A0A0A6YYH2 397 aa12.34□□□□□ -0.43
UBE3A-209ENST00000625778 IGKV1D-43A0A0B4J1Z2 117 aa12.34□□□□□ -0.43
UBE3A-209ENST00000625778 C7orf77A4D0Y5 90 aa12.34□□□□□ -0.43
UBE3A-209ENST00000625778 A6NJ64 397 aa12.34□□□□□ -0.43
UBE3A-209ENST00000625778 IGFBP3P17936 291 aaPredicted RBP12.34□□□□□ -0.43
UBE3A-209ENST00000625778 DHPSP49366 369 aaPredicted RBP12.34□□□□□ -0.43
UBE3A-209ENST00000625778 ASCL1P50553 236 aa12.34□□□□□ -0.43
UBE3A-209ENST00000625778 HHEXQ03014 270 aa12.34□□□□□ -0.43
UBE3A-209ENST00000625778 MIDNQ504T8 468 aa12.34□□□□□ -0.43
UBE3A-209ENST00000625778 Q6ZSR6 202 aa12.34□□□□□ -0.43
UBE3A-209ENST00000625778 TMEM230Q96A57 120 aa12.34□□□□□ -0.43
UBE3A-209ENST00000625778 JSRP1Q96MG2 331 aaPredicted RBP12.34□□□□□ -0.43
UBE3A-209ENST00000625778 TRAV36DV7A0A075B6V5 113 aa12.34□□□□□ -0.43
UBE3A-209ENST00000625778 IGLV1-36A0A0B4J1U3 117 aa12.34□□□□□ -0.43
UBE3A-209ENST00000625778 ZNF878C9JN71 531 aa12.34□□□□□ -0.43
UBE3A-209ENST00000625778 LAP3P28838 519 aa12.34□□□□□ -0.43
UBE3A-209ENST00000625778 RPP30P78346 268 aaKnown RBP12.34□□□□□ -0.43
UBE3A-209ENST00000625778 HLA-DQA1Q5Y7H0 255 aa12.34□□□□□ -0.43
UBE3A-209ENST00000625778 C16orf47Q6ZP98 133 aaPredicted RBP12.34□□□□□ -0.43
UBE3A-209ENST00000625778 ZNF248Q8NDW4 579 aa12.34□□□□□ -0.43
UBE3A-209ENST00000625778 ADAMTS17Q8TE56 1095 aa12.34□□□□□ -0.43
UBE3A-209ENST00000625778 ARHGAP5-AS1Q96IT6 56 aa12.34□□□□□ -0.43
UBE3A-209ENST00000625778 CDC6Q99741 560 aa12.34□□□□□ -0.43
UBE3A-209ENST00000625778 NMES1Q9C002 83 aa12.34□□□□□ -0.43
UBE3A-209ENST00000625778 PRODH2Q9UF12 536 aa12.34□□□□□ -0.43
UBE3A-209ENST00000625778 FBXL17Q9UF56 701 aa12.34□□□□□ -0.43
UBE3A-209ENST00000625778 PUS1Q9Y606 427 aaKnown RBP eCLIP12.34□□□□□ -0.43
UBE3A-209ENST00000625778 CFAP54Q96N23 3096 aa12.34□□□□□ -0.43
UBE3A-209ENST00000625778 C5orf52A6NGY3 159 aa12.33□□□□□ -0.43
UBE3A-209ENST00000625778 H3BML4 177 aa12.33□□□□□ -0.43
UBE3A-209ENST00000625778 K7EPK0 472 aa12.33□□□□□ -0.43
UBE3A-209ENST00000625778 ZNF217O75362 1048 aa12.33□□□□□ -0.43
UBE3A-209ENST00000625778 KLF8O95600 359 aaPredicted RBP12.33□□□□□ -0.43
UBE3A-209ENST00000625778 BGLAPP02818 100 aa12.33□□□□□ -0.43
UBE3A-209ENST00000625778 FBP1P09467 338 aa12.33□□□□□ -0.43
UBE3A-209ENST00000625778 CTSEP14091 401 aa12.33□□□□□ -0.43
UBE3A-209ENST00000625778 S100A2P29034 98 aa12.33□□□□□ -0.43
UBE3A-209ENST00000625778 FCGR2CP31995 323 aa12.33□□□□□ -0.43
UBE3A-209ENST00000625778 OR3A4PP47883 348 aa12.33□□□□□ -0.43
UBE3A-209ENST00000625778 POU3F1Q03052 451 aaPredicted RBP12.33□□□□□ -0.43
UBE3A-209ENST00000625778 SRSF4Q08170 494 aaKnown RBP12.33□□□□□ -0.43
UBE3A-209ENST00000625778 EIF5AL1Q6IS14 154 aaKnown RBP12.33□□□□□ -0.43
UBE3A-209ENST00000625778 SHISA6Q6ZSJ9 500 aa12.33□□□□□ -0.43
UBE3A-209ENST00000625778 ABHD12BQ7Z5M8 362 aaPredicted RBP12.33□□□□□ -0.43
UBE3A-209ENST00000625778 FAM71E2Q8N5Q1 922 aa12.33□□□□□ -0.43
UBE3A-209ENST00000625778 OR10D4PQ8NGN7 298 aa12.33□□□□□ -0.43
UBE3A-209ENST00000625778 C14orf144Q96I85 54 aa12.33□□□□□ -0.43
UBE3A-209ENST00000625778 SLC2A4RGQ9NR83 387 aa12.33□□□□□ -0.43
UBE3A-209ENST00000625778 CEP290O15078 2479 aa12.33□□□□□ -0.44
UBE3A-209ENST00000625778 TMED7-TICAM2A0A0A6YYA0 188 aa12.33□□□□□ -0.44
UBE3A-209ENST00000625778 ZNF729A6NN14 1252 aaPredicted RBP12.33□□□□□ -0.44
UBE3A-209ENST00000625778 SHISA8B8ZZ34 492 aa12.33□□□□□ -0.44
UBE3A-209ENST00000625778 NPIPA5E9PKD4 350 aa12.33□□□□□ -0.44
UBE3A-209ENST00000625778 LDLRAD4O15165 306 aa12.33□□□□□ -0.44
UBE3A-209ENST00000625778 TAS2R31P59538 309 aa12.33□□□□□ -0.44
UBE3A-209ENST00000625778 C10orf91Q5T1B1 145 aa12.33□□□□□ -0.44
UBE3A-209ENST00000625778 CARD17Q5XLA6 110 aa12.33□□□□□ -0.44
UBE3A-209ENST00000625778 SLC22A24Q8N4F4 322 aa12.33□□□□□ -0.44
UBE3A-209ENST00000625778 RNASE11Q8TAA1 199 aaKnown RBP12.33□□□□□ -0.44
UBE3A-209ENST00000625778 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.33□□□□□ -0.44
UBE3A-209ENST00000625778 GTF3AQ92664 365 aaKnown RBP12.33□□□□□ -0.44
UBE3A-209ENST00000625778 MISP3Q96FF7 219 aa12.33□□□□□ -0.44
UBE3A-209ENST00000625778 TOX2Q96NM4 488 aa12.33□□□□□ -0.44
UBE3A-209ENST00000625778 G6PC2Q9NQR9 355 aa12.33□□□□□ -0.44
UBE3A-209ENST00000625778 NPIPA1Q9UND3 350 aa12.33□□□□□ -0.44
UBE3A-209ENST00000625778 VDAC3Q9Y277 283 aa12.33□□□□□ -0.44
UBE3A-209ENST00000625778 MRPS28Q9Y2Q9 187 aaKnown RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms