RNA–Protein interactions for RNA: ENST00000622836.1

PCDHGC3-208, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 795 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-208ENST00000622836 SNTNA6NMZ2 147 aa11.78□□□□□ -0.52
PCDHGC3-208ENST00000622836 TMEM178BH3BS89 294 aa11.78□□□□□ -0.52
PCDHGC3-208ENST00000622836 CYB5R3P00387 301 aaPredicted RBP11.78□□□□□ -0.52
PCDHGC3-208ENST00000622836 KRT8P05787 483 aa11.78□□□□□ -0.52
PCDHGC3-208ENST00000622836 MSMBP08118 114 aa11.78□□□□□ -0.52
PCDHGC3-208ENST00000622836 HNF1AP20823 631 aa11.78□□□□□ -0.52
PCDHGC3-208ENST00000622836 PCMT1P22061 227 aa11.78□□□□□ -0.52
PCDHGC3-208ENST00000622836 CD200P41217 278 aa11.78□□□□□ -0.52
PCDHGC3-208ENST00000622836 LMO4P61968 165 aa11.78□□□□□ -0.52
PCDHGC3-208ENST00000622836 GABPB1Q06547 395 aaPredicted RBP11.78□□□□□ -0.52
PCDHGC3-208ENST00000622836 MAB21L1Q13394 359 aa11.78□□□□□ -0.52
PCDHGC3-208ENST00000622836 TMED1Q13445 227 aa11.78□□□□□ -0.52
PCDHGC3-208ENST00000622836 SNCBQ16143 134 aa11.78□□□□□ -0.52
PCDHGC3-208ENST00000622836 KLBQ86Z14 1044 aa11.78□□□□□ -0.52
PCDHGC3-208ENST00000622836 KLHL36Q8N4N3 616 aa11.78□□□□□ -0.52
PCDHGC3-208ENST00000622836 SPICQ8N5J4 248 aa11.78□□□□□ -0.52
PCDHGC3-208ENST00000622836 CELF2-AS1Q8N7Q2 184 aa11.78□□□□□ -0.52
PCDHGC3-208ENST00000622836 SPERTQ8NA61 448 aa11.78□□□□□ -0.52
PCDHGC3-208ENST00000622836 CSNK2A3Q8NEV1 391 aa11.78□□□□□ -0.52
PCDHGC3-208ENST00000622836 OR51F2Q8NH61 342 aa11.78□□□□□ -0.52
PCDHGC3-208ENST00000622836 APOL4Q9BPW4 351 aa11.78□□□□□ -0.52
PCDHGC3-208ENST00000622836 FN3KRPQ9HA64 309 aa11.78□□□□□ -0.52
PCDHGC3-208ENST00000622836 C14orf119Q9NWQ9 140 aa11.78□□□□□ -0.52
PCDHGC3-208ENST00000622836 TMEM160Q9NX00 188 aa11.78□□□□□ -0.52
PCDHGC3-208ENST00000622836 LPAR3Q9UBY5 353 aa11.78□□□□□ -0.52
PCDHGC3-208ENST00000622836 ZNF391Q9UJN7 358 aa11.78□□□□□ -0.52
PCDHGC3-208ENST00000622836 ABCA2Q9BZC7 2435 aa11.77□□□□□ -0.52
PCDHGC3-208ENST00000622836 A0A1B0GWJ7 208 aa11.77□□□□□ -0.53
PCDHGC3-208ENST00000622836 ACOD1A6NK06 481 aa11.77□□□□□ -0.53
PCDHGC3-208ENST00000622836 PRR32B1ATL7 298 aa11.77□□□□□ -0.53
PCDHGC3-208ENST00000622836 LOC110117498-PIK3R3F6TDL0 507 aa11.77□□□□□ -0.53
PCDHGC3-208ENST00000622836 MAGEB4O15481 346 aaPredicted RBP11.77□□□□□ -0.53
PCDHGC3-208ENST00000622836 ENTPD6O75354 484 aa11.77□□□□□ -0.53
PCDHGC3-208ENST00000622836 ZNF205O95201 554 aa11.77□□□□□ -0.53
PCDHGC3-208ENST00000622836 IGHV2-70P01814 119 aa11.77□□□□□ -0.53
PCDHGC3-208ENST00000622836 IGHV2-5P01817 119 aa11.77□□□□□ -0.53
PCDHGC3-208ENST00000622836 GRPP07492 148 aa11.77□□□□□ -0.53
PCDHGC3-208ENST00000622836 OR2T7P0C7T2 308 aa11.77□□□□□ -0.53
PCDHGC3-208ENST00000622836 DCTDP32321 178 aa11.77□□□□□ -0.53
PCDHGC3-208ENST00000622836 MDH2P40926 338 aaKnown RBP11.77□□□□□ -0.53
PCDHGC3-208ENST00000622836 GATA4P43694 442 aa11.77□□□□□ -0.53
PCDHGC3-208ENST00000622836 DVL1P1P54792 670 aaPredicted RBP11.77□□□□□ -0.53
PCDHGC3-208ENST00000622836 EGR3Q06889 387 aa11.77□□□□□ -0.53
PCDHGC3-208ENST00000622836 RCN1Q15293 331 aa11.77□□□□□ -0.53
PCDHGC3-208ENST00000622836 ZMYND11Q15326 602 aa11.77□□□□□ -0.53
PCDHGC3-208ENST00000622836 LRRC36Q1X8D7 754 aa11.77□□□□□ -0.53
PCDHGC3-208ENST00000622836 MEDAGQ5VYS4 303 aa11.77□□□□□ -0.53
PCDHGC3-208ENST00000622836 MUC20Q8N307 709 aaPredicted RBP11.77□□□□□ -0.53
PCDHGC3-208ENST00000622836 GALNT4Q8N4A0 578 aa11.77□□□□□ -0.53
PCDHGC3-208ENST00000622836 YIPF7Q8N8F6 280 aa11.77□□□□□ -0.53
PCDHGC3-208ENST00000622836 ZNF555Q8NEP9 628 aa11.77□□□□□ -0.53
PCDHGC3-208ENST00000622836 OR2T27Q8NH04 317 aa11.77□□□□□ -0.53
PCDHGC3-208ENST00000622836 ERGIC1Q969X5 290 aa11.77□□□□□ -0.53
PCDHGC3-208ENST00000622836 C1orf159Q96HA4 380 aa11.77□□□□□ -0.53
PCDHGC3-208ENST00000622836 SIGLEC11Q96RL6 698 aa11.77□□□□□ -0.53
PCDHGC3-208ENST00000622836 PBOV1Q9GZY1 135 aa11.77□□□□□ -0.53
PCDHGC3-208ENST00000622836 HIF1ANQ9NWT6 349 aa11.77□□□□□ -0.53
PCDHGC3-208ENST00000622836 FAM206AQ9NX38 181 aa11.77□□□□□ -0.53
PCDHGC3-208ENST00000622836 RHBDD3Q9Y3P4 386 aa11.77□□□□□ -0.53
PCDHGC3-208ENST00000622836 LOC100130705A0A1B0GUX0 176 aa11.76□□□□□ -0.53
PCDHGC3-208ENST00000622836 A0A1W2PQL4 384 aaPredicted RBP11.76□□□□□ -0.53
PCDHGC3-208ENST00000622836 hCG_1807616A0A1W2PRN6 198 aa11.76□□□□□ -0.53
PCDHGC3-208ENST00000622836 ANXA2P2A6NMY6 339 aa11.76□□□□□ -0.53
PCDHGC3-208ENST00000622836 MPZL2O60487 215 aa11.76□□□□□ -0.53
PCDHGC3-208ENST00000622836 RPP14O95059 124 aaKnown RBP11.76□□□□□ -0.53
PCDHGC3-208ENST00000622836 MTNR1AP48039 350 aa11.76□□□□□ -0.53
PCDHGC3-208ENST00000622836 SNRPGP62308 76 aaKnown RBP11.76□□□□□ -0.53
PCDHGC3-208ENST00000622836 MFGE8Q08431 387 aaPredicted RBP11.76□□□□□ -0.53
PCDHGC3-208ENST00000622836 OR8B8Q15620 311 aa11.76□□□□□ -0.53
PCDHGC3-208ENST00000622836 MPPED2Q15777 294 aa11.76□□□□□ -0.53
PCDHGC3-208ENST00000622836 OCLNQ16625 522 aa11.76□□□□□ -0.53
PCDHGC3-208ENST00000622836 CR1LQ2VPA4 569 aa11.76□□□□□ -0.53
PCDHGC3-208ENST00000622836 TMEM155Q4W5P6 130 aa11.76□□□□□ -0.53
PCDHGC3-208ENST00000622836 FAM120AOSQ5T036 256 aa11.76□□□□□ -0.53
PCDHGC3-208ENST00000622836 BCL2L15Q5TBC7 163 aa11.76□□□□□ -0.53
PCDHGC3-208ENST00000622836 PLEKHG7Q6ZR37 379 aa11.76□□□□□ -0.53
PCDHGC3-208ENST00000622836 IL17RELQ6ZVW7 336 aa11.76□□□□□ -0.53
PCDHGC3-208ENST00000622836 SSX6Q7RTT6 188 aa11.76□□□□□ -0.53
PCDHGC3-208ENST00000622836 LRRC28Q86X40 367 aaPredicted RBP11.76□□□□□ -0.53
PCDHGC3-208ENST00000622836 BOLLQ8N9W6 283 aaKnown RBP11.76□□□□□ -0.53
PCDHGC3-208ENST00000622836 TMEM186Q96B77 213 aa11.76□□□□□ -0.53
PCDHGC3-208ENST00000622836 RNFT2Q96EX2 444 aa11.76□□□□□ -0.53
PCDHGC3-208ENST00000622836 FAM71F1Q96KD3 344 aaPredicted RBP11.76□□□□□ -0.53
PCDHGC3-208ENST00000622836 LYZL4Q96KX0 146 aa11.76□□□□□ -0.53
PCDHGC3-208ENST00000622836 MOB1AQ9H8S9 216 aa11.76□□□□□ -0.53
PCDHGC3-208ENST00000622836 C1orf123Q9NWV4 160 aa11.76□□□□□ -0.53
PCDHGC3-208ENST00000622836 SMPD3Q9NY59 655 aaPredicted RBP11.76□□□□□ -0.53
PCDHGC3-208ENST00000622836 MRM2Q9UI43 246 aaKnown RBP11.76□□□□□ -0.53
PCDHGC3-208ENST00000622836 R4GMQ9 66 aa11.76□□□□□ -0.53
PCDHGC3-208ENST00000622836 PPIAL4EA0A075B759 164 aa11.75□□□□□ -0.53
PCDHGC3-208ENST00000622836 TRAV20A0A0B4J274 112 aa11.75□□□□□ -0.53
PCDHGC3-208ENST00000622836 A0A0U1RQV5 110 aa11.75□□□□□ -0.53
PCDHGC3-208ENST00000622836 ERICH4A6NGS2 130 aa11.75□□□□□ -0.53
PCDHGC3-208ENST00000622836 PPIAL4DF5H284 164 aa11.75□□□□□ -0.53
PCDHGC3-208ENST00000622836 PLPP2O43688 288 aa11.75□□□□□ -0.53
PCDHGC3-208ENST00000622836 FAM20BO75063 409 aa11.75□□□□□ -0.53
PCDHGC3-208ENST00000622836 PPIAL4FP0DN26 164 aa11.75□□□□□ -0.53
PCDHGC3-208ENST00000622836 MAP2K3P46734 347 aa11.75□□□□□ -0.53
PCDHGC3-208ENST00000622836 ACTC1P68032 377 aa11.75□□□□□ -0.53
PCDHGC3-208ENST00000622836 ACTA1P68133 377 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms