RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 SPSB4Q96A44 273 aa15.36■□□□□ 0.05
PTCHD3-202ENST00000622555 ORAI1Q96D31 301 aa15.36■□□□□ 0.05
PTCHD3-202ENST00000622555 ZNF275Q9NSD4 429 aaPredicted RBP15.36■□□□□ 0.05
PTCHD3-202ENST00000622555 TRBV5-7A0A0A0MS05 114 aa15.35■□□□□ 0.05
PTCHD3-202ENST00000622555 hCG_38984A0A1B0GV85 526 aa15.35■□□□□ 0.05
PTCHD3-202ENST00000622555 PIN1P1O15428 100 aa15.35■□□□□ 0.05
PTCHD3-202ENST00000622555 EPXP11678 715 aa15.35■□□□□ 0.05
PTCHD3-202ENST00000622555 ZNF20P17024 532 aa15.35■□□□□ 0.05
PTCHD3-202ENST00000622555 BSPH1Q075Z2 132 aa15.35■□□□□ 0.05
PTCHD3-202ENST00000622555 SPOCK1Q08629 439 aa15.35■□□□□ 0.05
PTCHD3-202ENST00000622555 HSD17B12Q53GQ0 312 aa15.35■□□□□ 0.05
PTCHD3-202ENST00000622555 CCDC54Q8NEL0 328 aa15.35■□□□□ 0.05
PTCHD3-202ENST00000622555 OR14K1Q8NGZ2 314 aa15.35■□□□□ 0.05
PTCHD3-202ENST00000622555 FGGYQ96C11 551 aa15.35■□□□□ 0.05
PTCHD3-202ENST00000622555 RADILQ96JH8 1075 aa15.35■□□□□ 0.05
PTCHD3-202ENST00000622555 BCL2L14Q9BZR8 327 aa15.35■□□□□ 0.05
PTCHD3-202ENST00000622555 PLEKHA1Q9HB21 404 aa15.35■□□□□ 0.05
PTCHD3-202ENST00000622555 SPEF1Q9Y4P9 236 aa15.35■□□□□ 0.05
PTCHD3-202ENST00000622555 V9GYS6 101 aa15.35■□□□□ 0.05
PTCHD3-202ENST00000622555 LOC390937A0A1W2PQ73 354 aa15.34■□□□□ 0.05
PTCHD3-202ENST00000622555 DPRXA6NFQ7 191 aa15.34■□□□□ 0.05
PTCHD3-202ENST00000622555 A6NIN4 97 aa15.34■□□□□ 0.05
PTCHD3-202ENST00000622555 ATP6V1G2-DDX39BF2Z307 99 aa15.34■□□□□ 0.05
PTCHD3-202ENST00000622555 MYL9P24844 172 aa15.34■□□□□ 0.05
PTCHD3-202ENST00000622555 GSK3AP49840 483 aa15.34■□□□□ 0.05
PTCHD3-202ENST00000622555 ERVS71-1P61550 626 aa15.34■□□□□ 0.05
PTCHD3-202ENST00000622555 FAM3AP98173 230 aa15.34■□□□□ 0.05
PTCHD3-202ENST00000622555 PGAP1Q75T13 922 aa15.34■□□□□ 0.05
PTCHD3-202ENST00000622555 PIAS4Q8N2W9 510 aaPredicted RBP15.34■□□□□ 0.05
PTCHD3-202ENST00000622555 REPIN1Q9BWE0 567 aaKnown RBP15.34■□□□□ 0.05
PTCHD3-202ENST00000622555 OPA3Q9H6K4 179 aa15.34■□□□□ 0.05
PTCHD3-202ENST00000622555 RAF1P04049 648 aa15.34■□□□□ 0.05
PTCHD3-202ENST00000622555 GNALP38405 381 aa15.34■□□□□ 0.05
PTCHD3-202ENST00000622555 MAP2K3P46734 347 aa15.34■□□□□ 0.05
PTCHD3-202ENST00000622555 SNTB2Q13425 540 aaKnown RBP15.34■□□□□ 0.05
PTCHD3-202ENST00000622555 C16orf87Q6PH81 154 aa15.34■□□□□ 0.05
PTCHD3-202ENST00000622555 SEMA6DQ8NFY4 1073 aa15.34■□□□□ 0.05
PTCHD3-202ENST00000622555 SLC25A40Q8TBP6 338 aa15.34■□□□□ 0.05
PTCHD3-202ENST00000622555 ADAT3Q96EY9 351 aaPredicted RBP15.34■□□□□ 0.05
PTCHD3-202ENST00000622555 OR2J1Q9GZK6 312 aa15.34■□□□□ 0.05
PTCHD3-202ENST00000622555 ESRP2Q9H6T0 727 aaKnown RBP15.34■□□□□ 0.05
PTCHD3-202ENST00000622555 PIGLQ9Y2B2 252 aa15.34■□□□□ 0.05
PTCHD3-202ENST00000622555 FLNCQ14315 2725 aa15.33■□□□□ 0.05
PTCHD3-202ENST00000622555 A0A075B6Q4 140 aa15.33■□□□□ 0.04
PTCHD3-202ENST00000622555 ANKRD61A6NGH8 418 aa15.33■□□□□ 0.04
PTCHD3-202ENST00000622555 GGT3PA6NGU5 568 aa15.33■□□□□ 0.04
PTCHD3-202ENST00000622555 ABCD4O14678 606 aa15.33■□□□□ 0.04
PTCHD3-202ENST00000622555 FAHP16930 419 aa15.33■□□□□ 0.04
PTCHD3-202ENST00000622555 ACKR3P25106 362 aa15.33■□□□□ 0.04
PTCHD3-202ENST00000622555 Q6ZSR3 168 aa15.33■□□□□ 0.04
PTCHD3-202ENST00000622555 PLPPR2Q96GM1 343 aa15.33■□□□□ 0.04
PTCHD3-202ENST00000622555 TCF7L1Q9HCS4 588 aa15.33■□□□□ 0.04
PTCHD3-202ENST00000622555 CKLFQ9UBR5 152 aa15.33■□□□□ 0.04
PTCHD3-202ENST00000622555 CASKO14936 926 aa15.32■□□□□ 0.04
PTCHD3-202ENST00000622555 CDRT1O95170 752 aa15.32■□□□□ 0.04
PTCHD3-202ENST00000622555 RNF224P0DH78 156 aa15.32■□□□□ 0.04
PTCHD3-202ENST00000622555 SRMP19623 302 aa15.32■□□□□ 0.04
PTCHD3-202ENST00000622555 SDC2P34741 201 aa15.32■□□□□ 0.04
PTCHD3-202ENST00000622555 MXD1Q05195 221 aa15.32■□□□□ 0.04
PTCHD3-202ENST00000622555 RIPPLY1Q0D2K3 151 aa15.32■□□□□ 0.04
PTCHD3-202ENST00000622555 TNK1Q13470 666 aa15.32■□□□□ 0.04
PTCHD3-202ENST00000622555 OR8B8Q15620 311 aa15.32■□□□□ 0.04
PTCHD3-202ENST00000622555 NCMAPQ5T1S8 102 aa15.32■□□□□ 0.04
PTCHD3-202ENST00000622555 SLC22A25Q6T423 547 aa15.32■□□□□ 0.04
PTCHD3-202ENST00000622555 FBXW12Q6X9E4 464 aa15.32■□□□□ 0.04
PTCHD3-202ENST00000622555 SERPINA12Q8IW75 414 aa15.32■□□□□ 0.04
PTCHD3-202ENST00000622555 C1orf174Q8IYL3 243 aa15.32■□□□□ 0.04
PTCHD3-202ENST00000622555 PARP16Q8N5Y8 322 aa15.32■□□□□ 0.04
PTCHD3-202ENST00000622555 CHPT1Q8WUD6 406 aa15.32■□□□□ 0.04
PTCHD3-202ENST00000622555 SLITRK2Q9H156 845 aa15.32■□□□□ 0.04
PTCHD3-202ENST00000622555 TAS2R4Q9NYW5 299 aa15.32■□□□□ 0.04
PTCHD3-202ENST00000622555 PLCE1Q9P212 2302 aa15.32■□□□□ 0.04
PTCHD3-202ENST00000622555 USP9XQ93008 2570 aaPredicted RBP15.32■□□□□ 0.04
PTCHD3-202ENST00000622555 DOPEY1Q5JWR5 2465 aa15.32■□□□□ 0.04
PTCHD3-202ENST00000622555 TRAV8-7A0A075B6U6 113 aa15.31■□□□□ 0.04
PTCHD3-202ENST00000622555 SHISA3A0PJX4 238 aa15.31■□□□□ 0.04
PTCHD3-202ENST00000622555 WIPF3A6NGB9 483 aa15.31■□□□□ 0.04
PTCHD3-202ENST00000622555 DHRS7CA6NNS2 312 aa15.31■□□□□ 0.04
PTCHD3-202ENST00000622555 C19orf84I3L1E1 186 aa15.31■□□□□ 0.04
PTCHD3-202ENST00000622555 TUBG1P23258 451 aa15.31■□□□□ 0.04
PTCHD3-202ENST00000622555 ETV6P41212 452 aa15.31■□□□□ 0.04
PTCHD3-202ENST00000622555 KIR2DL3P43628 341 aa15.31■□□□□ 0.04
PTCHD3-202ENST00000622555 MTNR1BP49286 362 aa15.31■□□□□ 0.04
PTCHD3-202ENST00000622555 OR56B2PQ8NGI1 322 aa15.31■□□□□ 0.04
PTCHD3-202ENST00000622555 CMBLQ96DG6 245 aa15.31■□□□□ 0.04
PTCHD3-202ENST00000622555 MARS2Q96GW9 593 aaKnown RBP15.31■□□□□ 0.04
PTCHD3-202ENST00000622555 TUBG2Q9NRH3 451 aa15.31■□□□□ 0.04
PTCHD3-202ENST00000622555 UBR5O95071 2799 aaPredicted RBP15.31■□□□□ 0.04
PTCHD3-202ENST00000622555 TRAV1-2A0A0B4J238 106 aa15.31■□□□□ 0.04
PTCHD3-202ENST00000622555 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.31■□□□□ 0.04
PTCHD3-202ENST00000622555 PLA2G2AP14555 144 aa15.31■□□□□ 0.04
PTCHD3-202ENST00000622555 FSTP19883 344 aa15.31■□□□□ 0.04
PTCHD3-202ENST00000622555 CD40LGP29965 261 aa15.31■□□□□ 0.04
PTCHD3-202ENST00000622555 THBS4P35443 961 aa15.31■□□□□ 0.04
PTCHD3-202ENST00000622555 RPS19P39019 145 aaKnown RBP15.31■□□□□ 0.04
PTCHD3-202ENST00000622555 PPP5CP53041 499 aa15.31■□□□□ 0.04
PTCHD3-202ENST00000622555 NKX6-1P78426 367 aaPredicted RBP15.31■□□□□ 0.04
PTCHD3-202ENST00000622555 BEX5Q5H9J7 111 aa15.31■□□□□ 0.04
PTCHD3-202ENST00000622555 ASPHD2Q6ICH7 369 aa15.31■□□□□ 0.04
PTCHD3-202ENST00000622555 RGS7BPQ6MZT1 257 aaPredicted RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 353.2 ms