RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 ZNF724A8MTY0 619 aa15.14■□□□□ 0.01
PCDHGC3-205ENST00000617641 FARS2O95363 451 aaKnown RBP15.14■□□□□ 0.01
PCDHGC3-205ENST00000617641 LCATP04180 440 aa15.14■□□□□ 0.01
PCDHGC3-205ENST00000617641 YES1P07947 543 aa15.14■□□□□ 0.01
PCDHGC3-205ENST00000617641 MMP7P09237 267 aaPredicted RBP15.14■□□□□ 0.01
PCDHGC3-205ENST00000617641 PSMB1P20618 241 aaKnown RBP15.14■□□□□ 0.01
PCDHGC3-205ENST00000617641 CLN3Q13286 438 aa15.14■□□□□ 0.01
PCDHGC3-205ENST00000617641 DEFB109BQ30KR1 87 aa15.14■□□□□ 0.01
PCDHGC3-205ENST00000617641 KRTAP27-1Q3LI81 207 aa15.14■□□□□ 0.01
PCDHGC3-205ENST00000617641 GLIPR1L1Q6UWM5 242 aa15.14■□□□□ 0.01
PCDHGC3-205ENST00000617641 MCEMP1Q8IX19 187 aa15.14■□□□□ 0.01
PCDHGC3-205ENST00000617641 ZNF101Q8IZC7 436 aa15.14■□□□□ 0.01
PCDHGC3-205ENST00000617641 SEH1LQ96EE3 360 aa15.14■□□□□ 0.01
PCDHGC3-205ENST00000617641 GHITMQ9H3K2 345 aa15.14■□□□□ 0.01
PCDHGC3-205ENST00000617641 MUC6Q6W4X9 2439 aa15.14■□□□□ 0.01
PCDHGC3-205ENST00000617641 A0A096LPE4 126 aa15.14■□□□□ 0.01
PCDHGC3-205ENST00000617641 A0A0A6YYH2 397 aa15.14■□□□□ 0.01
PCDHGC3-205ENST00000617641 A0A1W2PPZ6 126 aa15.14■□□□□ 0.01
PCDHGC3-205ENST00000617641 METTL21EPA6NDL7 271 aa15.14■□□□□ 0.01
PCDHGC3-205ENST00000617641 A6NJ64 397 aa15.14■□□□□ 0.01
PCDHGC3-205ENST00000617641 ZNF587BE7ETH6 402 aa15.14■□□□□ 0.01
PCDHGC3-205ENST00000617641 PRSS12P56730 875 aa15.14■□□□□ 0.01
PCDHGC3-205ENST00000617641 RNPS1Q15287 305 aaKnown RBP15.14■□□□□ 0.01
PCDHGC3-205ENST00000617641 UBE2V2Q15819 145 aa15.14■□□□□ 0.01
PCDHGC3-205ENST00000617641 GSG1Q2KHT4 349 aa15.14■□□□□ 0.01
PCDHGC3-205ENST00000617641 Q6ZSR3 168 aa15.14■□□□□ 0.01
PCDHGC3-205ENST00000617641 NUFIP2Q7Z417 695 aaKnown RBP15.14■□□□□ 0.01
PCDHGC3-205ENST00000617641 OR4D10Q8NGI6 311 aa15.14■□□□□ 0.01
PCDHGC3-205ENST00000617641 OR4C16Q8NGL9 310 aa15.14■□□□□ 0.01
PCDHGC3-205ENST00000617641 OR56B4Q8NH76 319 aa15.14■□□□□ 0.01
PCDHGC3-205ENST00000617641 SSC4DQ8WTU2 575 aa15.14■□□□□ 0.01
PCDHGC3-205ENST00000617641 GIMAP1Q8WWP7 306 aa15.14■□□□□ 0.01
PCDHGC3-205ENST00000617641 GPER1Q99527 375 aa15.14■□□□□ 0.01
PCDHGC3-205ENST00000617641 OR10A4Q9H209 315 aa15.14■□□□□ 0.01
PCDHGC3-205ENST00000617641 RNF122Q9H9V4 155 aa15.14■□□□□ 0.01
PCDHGC3-205ENST00000617641 ITGB1BP2Q9UKP3 347 aa15.14■□□□□ 0.01
PCDHGC3-205ENST00000617641 TMEM235A6NFC5 223 aa15.13■□□□□ 0.01
PCDHGC3-205ENST00000617641 TMEM14DPA8MWL7 114 aa15.13■□□□□ 0.01
PCDHGC3-205ENST00000617641 RAB27BO00194 218 aa15.13■□□□□ 0.01
PCDHGC3-205ENST00000617641 CSF1P09603 554 aa15.13■□□□□ 0.01
PCDHGC3-205ENST00000617641 GTF2F2P13984 249 aa15.13■□□□□ 0.01
PCDHGC3-205ENST00000617641 LINC00303Q3SY05 128 aa15.13■□□□□ 0.01
PCDHGC3-205ENST00000617641 PABPC1L2AQ5JQF8 200 aa15.13■□□□□ 0.01
PCDHGC3-205ENST00000617641 APH1AQ96BI3 265 aa15.13■□□□□ 0.01
PCDHGC3-205ENST00000617641 REEP6Q96HR9 211 aa15.13■□□□□ 0.01
PCDHGC3-205ENST00000617641 C1orf147Q96MC9 270 aaPredicted RBP15.13■□□□□ 0.01
PCDHGC3-205ENST00000617641 ZNF224Q9NZL3 707 aa15.13■□□□□ 0.01
PCDHGC3-205ENST00000617641 MTRF1O75570 445 aaKnown RBP15.12■□□□□ 0.01
PCDHGC3-205ENST00000617641 TGM6O95932 706 aa15.12■□□□□ 0.01
PCDHGC3-205ENST00000617641 LPLP06858 475 aa15.12■□□□□ 0.01
PCDHGC3-205ENST00000617641 ACKR3P25106 362 aa15.12■□□□□ 0.01
PCDHGC3-205ENST00000617641 CAMK2BQ13554 666 aa15.12■□□□□ 0.01
PCDHGC3-205ENST00000617641 CDH26Q8IXH8 852 aa15.12■□□□□ 0.01
PCDHGC3-205ENST00000617641 TMEM104Q8NE00 496 aa15.12■□□□□ 0.01
PCDHGC3-205ENST00000617641 BEST4Q8NFU0 473 aa15.12■□□□□ 0.01
PCDHGC3-205ENST00000617641 DVL3Q92997 716 aaPredicted RBP15.12■□□□□ 0.01
PCDHGC3-205ENST00000617641 CHST5Q9GZS9 411 aa15.12■□□□□ 0.01
PCDHGC3-205ENST00000617641 TAS2R8Q9NYW2 309 aa15.12■□□□□ 0.01
PCDHGC3-205ENST00000617641 UPB1Q9UBR1 384 aa15.12■□□□□ 0.01
PCDHGC3-205ENST00000617641 RPL36A-HNRNPH2H7BZ11 118 aa15.12■□□□□ 0.01
PCDHGC3-205ENST00000617641 PRF1P14222 555 aa15.12■□□□□ 0.01
PCDHGC3-205ENST00000617641 CPN1P15169 458 aa15.12■□□□□ 0.01
PCDHGC3-205ENST00000617641 VEGFCP49767 419 aa15.12■□□□□ 0.01
PCDHGC3-205ENST00000617641 RAG2P55895 527 aa15.12■□□□□ 0.01
PCDHGC3-205ENST00000617641 NRN1LQ496H8 165 aa15.12■□□□□ 0.01
PCDHGC3-205ENST00000617641 CRIP3Q6Q6R5 217 aa15.12■□□□□ 0.01
PCDHGC3-205ENST00000617641 IGFL2Q6UWQ7 119 aa15.12■□□□□ 0.01
PCDHGC3-205ENST00000617641 CHST4Q8NCG5 386 aa15.12■□□□□ 0.01
PCDHGC3-205ENST00000617641 CPEB3Q8NE35 698 aaKnown RBP15.12■□□□□ 0.01
PCDHGC3-205ENST00000617641 OR5D18Q8NGL1 313 aa15.12■□□□□ 0.01
PCDHGC3-205ENST00000617641 OR8S1Q8NH09 359 aa15.12■□□□□ 0.01
PCDHGC3-205ENST00000617641 PP6455Q8WZ26 134 aa15.12■□□□□ 0.01
PCDHGC3-205ENST00000617641 ACTR6Q9GZN1 396 aa15.12■□□□□ 0.01
PCDHGC3-205ENST00000617641 OR51J1Q9H342 316 aa15.12■□□□□ 0.01
PCDHGC3-205ENST00000617641 SULT1C2O00338 296 aa15.11■□□□□ 0.01
PCDHGC3-205ENST00000617641 ARPC1BO15143 372 aaKnown RBP15.11■□□□□ 0.01
PCDHGC3-205ENST00000617641 PEX14O75381 377 aa15.11■□□□□ 0.01
PCDHGC3-205ENST00000617641 CD3DP04234 171 aa15.11■□□□□ 0.01
PCDHGC3-205ENST00000617641 FAPQ12884 760 aa15.11■□□□□ 0.01
PCDHGC3-205ENST00000617641 FCN2Q15485 313 aa15.11■□□□□ 0.01
PCDHGC3-205ENST00000617641 KISS1Q15726 138 aa15.11■□□□□ 0.01
PCDHGC3-205ENST00000617641 RAB12Q6IQ22 244 aa15.11■□□□□ 0.01
PCDHGC3-205ENST00000617641 RTN4RL2Q86UN3 420 aa15.11■□□□□ 0.01
PCDHGC3-205ENST00000617641 ZNF100Q8IYN0 542 aa15.11■□□□□ 0.01
PCDHGC3-205ENST00000617641 DACT3Q96B18 629 aaPredicted RBP15.11■□□□□ 0.01
PCDHGC3-205ENST00000617641 NICN1Q9BSH3 213 aa15.11■□□□□ 0.01
PCDHGC3-205ENST00000617641 MED28Q9H204 178 aa15.11■□□□□ 0.01
PCDHGC3-205ENST00000617641 FBLN5Q9UBX5 448 aa15.11■□□□□ 0.01
PCDHGC3-205ENST00000617641 A0A1W2PP11 408 aa15.11■□□□□ 0.01
PCDHGC3-205ENST00000617641 OR6C65A6NJZ3 312 aa15.11■□□□□ 0.01
PCDHGC3-205ENST00000617641 MPIG6BO95866 241 aa15.11■□□□□ 0.01
PCDHGC3-205ENST00000617641 FAUP35544 74 aaKnown RBP15.11■□□□□ 0.01
PCDHGC3-205ENST00000617641 ST3GAL2Q16842 350 aa15.11■□□□□ 0.01
PCDHGC3-205ENST00000617641 ZNF260Q3ZCT1 412 aa15.11■□□□□ 0.01
PCDHGC3-205ENST00000617641 Q6ZTK2 550 aa15.11■□□□□ 0.01
PCDHGC3-205ENST00000617641 SEMA6DQ8NFY4 1073 aa15.11■□□□□ 0.01
PCDHGC3-205ENST00000617641 AQP3Q92482 292 aa15.11■□□□□ 0.01
PCDHGC3-205ENST00000617641 PIGTQ969N2 578 aa15.11■□□□□ 0.01
PCDHGC3-205ENST00000617641 BANF2Q9H503 90 aa15.11■□□□□ 0.01
PCDHGC3-205ENST00000617641 C12orf49Q9H741 205 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms