RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 PCMT1P22061 227 aa13.33□□□□□ -0.28
PCDHGC3-204ENST00000617222 ACHEP22303 614 aa13.33□□□□□ -0.28
PCDHGC3-204ENST00000617222 CCL1P22362 96 aa13.33□□□□□ -0.28
PCDHGC3-204ENST00000617222 DDOSTP39656 456 aa13.33□□□□□ -0.28
PCDHGC3-204ENST00000617222 MAP2K3P46734 347 aa13.33□□□□□ -0.28
PCDHGC3-204ENST00000617222 MMP15P51511 669 aa13.33□□□□□ -0.28
PCDHGC3-204ENST00000617222 BDH1Q02338 343 aa13.33□□□□□ -0.28
PCDHGC3-204ENST00000617222 OR8B8Q15620 311 aa13.33□□□□□ -0.28
PCDHGC3-204ENST00000617222 Q6ZR03 302 aa13.33□□□□□ -0.28
PCDHGC3-204ENST00000617222 ZNF367Q7RTV3 350 aa13.33□□□□□ -0.28
PCDHGC3-204ENST00000617222 ZCCHC24Q8N2G6 241 aaKnown RBP13.33□□□□□ -0.28
PCDHGC3-204ENST00000617222 PLPP7Q8NBV4 271 aa13.33□□□□□ -0.28
PCDHGC3-204ENST00000617222 SEMA6DQ8NFY4 1073 aa13.33□□□□□ -0.28
PCDHGC3-204ENST00000617222 OR10AC1Q8NH08 325 aa13.33□□□□□ -0.28
PCDHGC3-204ENST00000617222 IGFBPL1Q8WX77 278 aa13.33□□□□□ -0.28
PCDHGC3-204ENST00000617222 GHSRQ92847 366 aa13.33□□□□□ -0.28
PCDHGC3-204ENST00000617222 SMIM19Q96E16 107 aa13.33□□□□□ -0.28
PCDHGC3-204ENST00000617222 LURAP1Q96LR2 239 aa13.33□□□□□ -0.28
PCDHGC3-204ENST00000617222 MGLLQ99685 303 aa13.33□□□□□ -0.28
PCDHGC3-204ENST00000617222 CACNG6Q9BXT2 260 aa13.33□□□□□ -0.28
PCDHGC3-204ENST00000617222 TMEM100Q9NV29 134 aa13.33□□□□□ -0.28
PCDHGC3-204ENST00000617222 HHLA2Q9UM44 414 aa13.33□□□□□ -0.28
PCDHGC3-204ENST00000617222 LOC390937A0A1W2PQ73 354 aa13.32□□□□□ -0.28
PCDHGC3-204ENST00000617222 ZSCAN5BA6NJL1 495 aa13.32□□□□□ -0.28
PCDHGC3-204ENST00000617222 ANKRD30BLA7E2S9 258 aa13.32□□□□□ -0.28
PCDHGC3-204ENST00000617222 SPRY3O43610 288 aa13.32□□□□□ -0.28
PCDHGC3-204ENST00000617222 DHRS3O75911 302 aa13.32□□□□□ -0.28
PCDHGC3-204ENST00000617222 RAF1P04049 648 aa13.32□□□□□ -0.28
PCDHGC3-204ENST00000617222 LIPAP38571 399 aa13.32□□□□□ -0.28
PCDHGC3-204ENST00000617222 CDKN1AP38936 164 aa13.32□□□□□ -0.28
PCDHGC3-204ENST00000617222 ZNF81P51508 661 aa13.32□□□□□ -0.28
PCDHGC3-204ENST00000617222 RIPPLY1Q0D2K3 151 aa13.32□□□□□ -0.28
PCDHGC3-204ENST00000617222 Q6ZSR3 168 aa13.32□□□□□ -0.28
PCDHGC3-204ENST00000617222 KCTD8Q6ZWB6 473 aa13.32□□□□□ -0.28
PCDHGC3-204ENST00000617222 CSNK2A3Q8NEV1 391 aa13.32□□□□□ -0.28
PCDHGC3-204ENST00000617222 PIGTQ969N2 578 aa13.32□□□□□ -0.28
PCDHGC3-204ENST00000617222 VRK1Q99986 396 aaPredicted RBP13.32□□□□□ -0.28
PCDHGC3-204ENST00000617222 SLC30A2Q9BRI3 323 aa13.32□□□□□ -0.28
PCDHGC3-204ENST00000617222 MS4A5Q9H3V2 200 aa13.32□□□□□ -0.28
PCDHGC3-204ENST00000617222 ISYNA1Q9NPH2 558 aa13.32□□□□□ -0.28
PCDHGC3-204ENST00000617222 CYSLTR2Q9NS75 346 aa13.32□□□□□ -0.28
PCDHGC3-204ENST00000617222 FBXO9Q9UK97 447 aaPredicted RBP13.32□□□□□ -0.28
PCDHGC3-204ENST00000617222 EDARQ9UNE0 448 aa13.32□□□□□ -0.28
PCDHGC3-204ENST00000617222 PIGLQ9Y2B2 252 aa13.32□□□□□ -0.28
PCDHGC3-204ENST00000617222 ZNF281Q9Y2X9 895 aa13.32□□□□□ -0.28
PCDHGC3-204ENST00000617222 RHBDD3Q9Y3P4 386 aa13.32□□□□□ -0.28
PCDHGC3-204ENST00000617222 V9GYS6 101 aa13.32□□□□□ -0.28
PCDHGC3-204ENST00000617222 SPG11Q96JI7 2443 aa13.32□□□□□ -0.28
PCDHGC3-204ENST00000617222 A6NIN4 97 aa13.31□□□□□ -0.28
PCDHGC3-204ENST00000617222 C17orf100A8MU93 164 aa13.31□□□□□ -0.28
PCDHGC3-204ENST00000617222 OVOL3O00110 214 aa13.31□□□□□ -0.28
PCDHGC3-204ENST00000617222 PLPP2O43688 288 aa13.31□□□□□ -0.28
PCDHGC3-204ENST00000617222 LMX1BO60663 402 aa13.31□□□□□ -0.28
PCDHGC3-204ENST00000617222 CA6P23280 308 aa13.31□□□□□ -0.28
PCDHGC3-204ENST00000617222 MAGEB1P43366 347 aa13.31□□□□□ -0.28
PCDHGC3-204ENST00000617222 PPOXP50336 477 aa13.31□□□□□ -0.28
PCDHGC3-204ENST00000617222 MLLT11Q13015 90 aaPredicted RBP13.31□□□□□ -0.28
PCDHGC3-204ENST00000617222 UBE2UQ5VVX9 321 aa13.31□□□□□ -0.28
PCDHGC3-204ENST00000617222 CCDC54Q8NEL0 328 aa13.31□□□□□ -0.28
PCDHGC3-204ENST00000617222 OR51A4Q8NGJ6 313 aa13.31□□□□□ -0.28
PCDHGC3-204ENST00000617222 OR13G1Q8NGZ3 307 aa13.31□□□□□ -0.28
PCDHGC3-204ENST00000617222 PIGCQ92535 297 aa13.31□□□□□ -0.28
PCDHGC3-204ENST00000617222 RGP1Q92546 391 aaPredicted RBP13.31□□□□□ -0.28
PCDHGC3-204ENST00000617222 UFD1Q92890 307 aa13.31□□□□□ -0.28
PCDHGC3-204ENST00000617222 ITFG2Q969R8 447 aa13.31□□□□□ -0.28
PCDHGC3-204ENST00000617222 PGLYRP3Q96LB9 341 aa13.31□□□□□ -0.28
PCDHGC3-204ENST00000617222 OPALINQ96PE5 141 aa13.31□□□□□ -0.28
PCDHGC3-204ENST00000617222 TPK1Q9H3S4 243 aa13.31□□□□□ -0.28
PCDHGC3-204ENST00000617222 CXorf56Q9H5V9 222 aa13.31□□□□□ -0.28
PCDHGC3-204ENST00000617222 MRPL15Q9P015 296 aaKnown RBP13.31□□□□□ -0.28
PCDHGC3-204ENST00000617222 CGGBP1Q9UFW8 167 aaPredicted RBP13.31□□□□□ -0.28
PCDHGC3-204ENST00000617222 CACNA1DQ01668 2161 aa13.3□□□□□ -0.28
PCDHGC3-204ENST00000617222 ZNF816-ZNF321PA0A0X1KG74 233 aa13.3□□□□□ -0.28
PCDHGC3-204ENST00000617222 H0YL77 283 aa13.3□□□□□ -0.28
PCDHGC3-204ENST00000617222 INMTO95050 263 aa13.3□□□□□ -0.28
PCDHGC3-204ENST00000617222 IGHV1-46P01743 117 aa13.3□□□□□ -0.28
PCDHGC3-204ENST00000617222 HLA-DPB1P04440 258 aa13.3□□□□□ -0.28
PCDHGC3-204ENST00000617222 CD1AP06126 327 aa13.3□□□□□ -0.28
PCDHGC3-204ENST00000617222 RPSAP08865 295 aaKnown RBP13.3□□□□□ -0.28
PCDHGC3-204ENST00000617222 FAHP16930 419 aa13.3□□□□□ -0.28
PCDHGC3-204ENST00000617222 ZNF12P17014 697 aa13.3□□□□□ -0.28
PCDHGC3-204ENST00000617222 DNASE1P24855 282 aa13.3□□□□□ -0.28
PCDHGC3-204ENST00000617222 PSMB9P28065 219 aa13.3□□□□□ -0.28
PCDHGC3-204ENST00000617222 GPR50Q13585 617 aa13.3□□□□□ -0.28
PCDHGC3-204ENST00000617222 TPBGQ13641 420 aa13.3□□□□□ -0.28
PCDHGC3-204ENST00000617222 NEDD8Q15843 81 aa13.3□□□□□ -0.28
PCDHGC3-204ENST00000617222 TSTQ16762 297 aaKnown RBP13.3□□□□□ -0.28
PCDHGC3-204ENST00000617222 ZMAT1Q5H9K5 638 aa13.3□□□□□ -0.28
PCDHGC3-204ENST00000617222 ARMCX4Q5H9R4 360 aa13.3□□□□□ -0.28
PCDHGC3-204ENST00000617222 LIPKQ5VXJ0 399 aa13.3□□□□□ -0.28
PCDHGC3-204ENST00000617222 OR2Z1Q8NG97 314 aa13.3□□□□□ -0.28
PCDHGC3-204ENST00000617222 OR13C3Q8NGS6 347 aa13.3□□□□□ -0.28
PCDHGC3-204ENST00000617222 OR13C5Q8NGS8 318 aa13.3□□□□□ -0.28
PCDHGC3-204ENST00000617222 GPR148Q8TDV2 347 aa13.3□□□□□ -0.28
PCDHGC3-204ENST00000617222 FCGR1BQ92637 280 aa13.3□□□□□ -0.28
PCDHGC3-204ENST00000617222 FGGYQ96C11 551 aa13.3□□□□□ -0.28
PCDHGC3-204ENST00000617222 PAPOLGQ9BWT3 736 aaKnown RBP13.3□□□□□ -0.28
PCDHGC3-204ENST00000617222 PPP1R3EQ9H7J1 279 aa13.3□□□□□ -0.28
PCDHGC3-204ENST00000617222 ZNF275Q9NSD4 429 aaPredicted RBP13.3□□□□□ -0.28
PCDHGC3-204ENST00000617222 ENPP5Q9UJA9 477 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms