RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 RANGRFQ9HD47 186 aaPredicted RBP14.89□□□□□ -0.03
SHKBP1-216ENST00000598201 EMC3Q9P0I2 261 aa14.89□□□□□ -0.03
SHKBP1-216ENST00000598201 ELF5Q9UKW6 265 aaPredicted RBP14.89□□□□□ -0.03
SHKBP1-216ENST00000598201 V9GYS6 101 aa14.89□□□□□ -0.03
SHKBP1-216ENST00000598201 A0A0A6YYJ9 748 aa14.88□□□□□ -0.03
SHKBP1-216ENST00000598201 WIPF3A6NGB9 483 aa14.88□□□□□ -0.03
SHKBP1-216ENST00000598201 VSIG8P0DPA2 414 aa14.88□□□□□ -0.03
SHKBP1-216ENST00000598201 KRTAP27-1Q3LI81 207 aa14.88□□□□□ -0.03
SHKBP1-216ENST00000598201 C9orf135Q5VTT2 229 aa14.88□□□□□ -0.03
SHKBP1-216ENST00000598201 ANGPTL5Q86XS5 388 aa14.88□□□□□ -0.03
SHKBP1-216ENST00000598201 FAM46BQ96A09 425 aa14.88□□□□□ -0.03
SHKBP1-216ENST00000598201 PTX4Q96A99 478 aa14.88□□□□□ -0.03
SHKBP1-216ENST00000598201 SGK3Q96BR1 496 aa14.88□□□□□ -0.03
SHKBP1-216ENST00000598201 FYTTD1Q96QD9 318 aaKnown RBP14.88□□□□□ -0.03
SHKBP1-216ENST00000598201 LINC00470Q9BZP3 86 aa14.88□□□□□ -0.03
SHKBP1-216ENST00000598201 EXO5Q9H790 373 aa14.88□□□□□ -0.03
SHKBP1-216ENST00000598201 ZDHHC11Q9H8X9 412 aa14.88□□□□□ -0.03
SHKBP1-216ENST00000598201 TIMM10BQ9Y5J6 103 aa14.88□□□□□ -0.03
SHKBP1-216ENST00000598201 TRGV5A0A0B4J1U4 118 aa14.88□□□□□ -0.03
SHKBP1-216ENST00000598201 RBBP9O75884 186 aa14.88□□□□□ -0.03
SHKBP1-216ENST00000598201 DHRS3O75911 302 aa14.88□□□□□ -0.03
SHKBP1-216ENST00000598201 APOC1P02654 83 aa14.88□□□□□ -0.03
SHKBP1-216ENST00000598201 FCER2P06734 321 aa14.88□□□□□ -0.03
SHKBP1-216ENST00000598201 ERCC1P07992 297 aaPredicted RBP14.88□□□□□ -0.03
SHKBP1-216ENST00000598201 GSTT2BP0CG30 244 aa14.88□□□□□ -0.03
SHKBP1-216ENST00000598201 FAHP16930 419 aa14.88□□□□□ -0.03
SHKBP1-216ENST00000598201 ARF1P84077 181 aaKnown RBP14.88□□□□□ -0.03
SHKBP1-216ENST00000598201 CD83Q01151 205 aa14.88□□□□□ -0.03
SHKBP1-216ENST00000598201 DEFB109BQ30KR1 87 aa14.88□□□□□ -0.03
SHKBP1-216ENST00000598201 OLFML2AQ68BL7 652 aa14.88□□□□□ -0.03
SHKBP1-216ENST00000598201 DRAM2Q6UX65 266 aa14.88□□□□□ -0.03
SHKBP1-216ENST00000598201 Q6ZSR3 168 aa14.88□□□□□ -0.03
SHKBP1-216ENST00000598201 BTN2A1Q7KYR7 527 aa14.88□□□□□ -0.03
SHKBP1-216ENST00000598201 ACBD4Q8NC06 268 aa14.88□□□□□ -0.03
SHKBP1-216ENST00000598201 OR2AE1Q8NHA4 323 aa14.88□□□□□ -0.03
SHKBP1-216ENST00000598201 SSC4DQ8WTU2 575 aa14.88□□□□□ -0.03
SHKBP1-216ENST00000598201 WDYHV1Q96HA8 205 aa14.88□□□□□ -0.03
SHKBP1-216ENST00000598201 ZMAT3Q9HA38 289 aaKnown RBP14.88□□□□□ -0.03
SHKBP1-216ENST00000598201 PARPBPQ9NWS1 579 aa14.88□□□□□ -0.03
SHKBP1-216ENST00000598201 COPZ2Q9P299 210 aa14.88□□□□□ -0.03
SHKBP1-216ENST00000598201 ZNF724A8MTY0 619 aa14.87□□□□□ -0.03
SHKBP1-216ENST00000598201 BPNT1O95861 308 aa14.87□□□□□ -0.03
SHKBP1-216ENST00000598201 MMP7P09237 267 aaPredicted RBP14.87□□□□□ -0.03
SHKBP1-216ENST00000598201 RAB6AP20340 208 aa14.87□□□□□ -0.03
SHKBP1-216ENST00000598201 PRSS3P35030 304 aa14.87□□□□□ -0.03
SHKBP1-216ENST00000598201 OR3A4PP47883 348 aa14.87□□□□□ -0.03
SHKBP1-216ENST00000598201 HTR5AP47898 357 aa14.87□□□□□ -0.03
SHKBP1-216ENST00000598201 CXADRP78310 365 aa14.87□□□□□ -0.03
SHKBP1-216ENST00000598201 ECH1Q13011 328 aa14.87□□□□□ -0.03
SHKBP1-216ENST00000598201 PCGF3Q3KNV8 242 aa14.87□□□□□ -0.03
SHKBP1-216ENST00000598201 AWAT2Q6E213 333 aa14.87□□□□□ -0.03
SHKBP1-216ENST00000598201 CRIP3Q6Q6R5 217 aa14.87□□□□□ -0.03
SHKBP1-216ENST00000598201 OR10A2Q9H208 303 aa14.87□□□□□ -0.03
SHKBP1-216ENST00000598201 ZNF224Q9NZL3 707 aa14.87□□□□□ -0.03
SHKBP1-216ENST00000598201 RAB22AQ9UL26 194 aa14.87□□□□□ -0.03
SHKBP1-216ENST00000598201 FLVCR2Q9UPI3 526 aa14.87□□□□□ -0.03
SHKBP1-216ENST00000598201 WISP2O76076 250 aa14.86□□□□□ -0.03
SHKBP1-216ENST00000598201 YES1P07947 543 aa14.86□□□□□ -0.03
SHKBP1-216ENST00000598201 HCKP08631 526 aa14.86□□□□□ -0.03
SHKBP1-216ENST00000598201 H2AFB2P0C5Z0 115 aa14.86□□□□□ -0.03
SHKBP1-216ENST00000598201 RRAS2P62070 204 aaPredicted RBP14.86□□□□□ -0.03
SHKBP1-216ENST00000598201 KCNJ8Q15842 424 aa14.86□□□□□ -0.03
SHKBP1-216ENST00000598201 IGFL2Q6UWQ7 119 aa14.86□□□□□ -0.03
SHKBP1-216ENST00000598201 NUFIP2Q7Z417 695 aaKnown RBP14.86□□□□□ -0.03
SHKBP1-216ENST00000598201 GPX8Q8TED1 209 aa14.86□□□□□ -0.03
SHKBP1-216ENST00000598201 CMBLQ96DG6 245 aa14.86□□□□□ -0.03
SHKBP1-216ENST00000598201 C1orf147Q96MC9 270 aaPredicted RBP14.86□□□□□ -0.03
SHKBP1-216ENST00000598201 MCUBQ9NWR8 336 aa14.86□□□□□ -0.03
SHKBP1-216ENST00000598201 NKIRAS2Q9NYR9 191 aa14.86□□□□□ -0.03
SHKBP1-216ENST00000598201 PIGLQ9Y2B2 252 aa14.86□□□□□ -0.03
SHKBP1-216ENST00000598201 C7orf66A4D0T2 115 aa14.86□□□□□ -0.03
SHKBP1-216ENST00000598201 NAP1L6A6NFF2 107 aa14.86□□□□□ -0.03
SHKBP1-216ENST00000598201 RAB27BO00194 218 aa14.86□□□□□ -0.03
SHKBP1-216ENST00000598201 TGM6O95932 706 aa14.86□□□□□ -0.03
SHKBP1-216ENST00000598201 DHFRP00374 187 aa14.86□□□□□ -0.03
SHKBP1-216ENST00000598201 PRSS12P56730 875 aa14.86□□□□□ -0.03
SHKBP1-216ENST00000598201 UBE2V2Q15819 145 aa14.86□□□□□ -0.03
SHKBP1-216ENST00000598201 OR4D10Q8NGI6 311 aa14.86□□□□□ -0.03
SHKBP1-216ENST00000598201 OR52H1Q8NGJ2 320 aa14.86□□□□□ -0.03
SHKBP1-216ENST00000598201 NPRL2Q8WTW4 380 aa14.86□□□□□ -0.03
SHKBP1-216ENST00000598201 SEH1LQ96EE3 360 aa14.86□□□□□ -0.03
SHKBP1-216ENST00000598201 C20orf85Q9H1P6 137 aa14.86□□□□□ -0.03
SHKBP1-216ENST00000598201 GHITMQ9H3K2 345 aa14.86□□□□□ -0.03
SHKBP1-216ENST00000598201 RNF122Q9H9V4 155 aa14.86□□□□□ -0.03
SHKBP1-216ENST00000598201 NEK6Q9HC98 313 aa14.86□□□□□ -0.03
SHKBP1-216ENST00000598201 MRPS28Q9Y2Q9 187 aaKnown RBP14.86□□□□□ -0.03
SHKBP1-216ENST00000598201 ZZEF1O43149 2961 aa14.85□□□□□ -0.03
SHKBP1-216ENST00000598201 A0A096LPE4 126 aa14.85□□□□□ -0.03
SHKBP1-216ENST00000598201 A0A1W2PPZ6 126 aa14.85□□□□□ -0.03
SHKBP1-216ENST00000598201 TMEM14DPA8MWL7 114 aa14.85□□□□□ -0.03
SHKBP1-216ENST00000598201 RPL36A-HNRNPH2H7BZ11 118 aa14.85□□□□□ -0.03
SHKBP1-216ENST00000598201 CPN1P15169 458 aa14.85□□□□□ -0.03
SHKBP1-216ENST00000598201 PSMB1P20618 241 aaKnown RBP14.85□□□□□ -0.03
SHKBP1-216ENST00000598201 ACKR3P25106 362 aa14.85□□□□□ -0.03
SHKBP1-216ENST00000598201 THBS4P35443 961 aa14.85□□□□□ -0.03
SHKBP1-216ENST00000598201 CAPZA1P52907 286 aa14.85□□□□□ -0.03
SHKBP1-216ENST00000598201 PCBD1P61457 104 aa14.85□□□□□ -0.03
SHKBP1-216ENST00000598201 RNPS1Q15287 305 aaKnown RBP14.85□□□□□ -0.03
SHKBP1-216ENST00000598201 GLIPR1L1Q6UWM5 242 aa14.85□□□□□ -0.03
SHKBP1-216ENST00000598201 CHMP1BQ7LBR1 199 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms