RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 LIPHQ8WWY8 451 aa15.31■□□□□ 0.04
SMARCA4-215ENST00000590574 SLC25A38Q96DW6 304 aa15.31■□□□□ 0.04
SMARCA4-215ENST00000590574 ARHGAP5-AS1Q96IT6 56 aa15.31■□□□□ 0.04
SMARCA4-215ENST00000590574 ZNF768Q9H5H4 540 aaKnown RBP15.31■□□□□ 0.04
SMARCA4-215ENST00000590574 CDH20Q9HBT6 801 aa15.31■□□□□ 0.04
SMARCA4-215ENST00000590574 IGHV3-9P01782 118 aa15.3■□□□□ 0.04
SMARCA4-215ENST00000590574 USF2Q15853 346 aaPredicted RBP15.3■□□□□ 0.04
SMARCA4-215ENST00000590574 ARRDC1Q8N5I2 433 aa15.3■□□□□ 0.04
SMARCA4-215ENST00000590574 CPT1CQ8TCG5 803 aa15.3■□□□□ 0.04
SMARCA4-215ENST00000590574 ARL5BQ96KC2 179 aa15.3■□□□□ 0.04
SMARCA4-215ENST00000590574 ZNF75AQ96N20 296 aa15.3■□□□□ 0.04
SMARCA4-215ENST00000590574 ZNF230Q9UIE0 474 aaPredicted RBP15.3■□□□□ 0.04
SMARCA4-215ENST00000590574 VAMP5O95183 116 aa15.3■□□□□ 0.04
SMARCA4-215ENST00000590574 SRFP11831 508 aa15.3■□□□□ 0.04
SMARCA4-215ENST00000590574 FCARP24071 287 aa15.3■□□□□ 0.04
SMARCA4-215ENST00000590574 NKX6-1P78426 367 aaPredicted RBP15.3■□□□□ 0.04
SMARCA4-215ENST00000590574 SRPXP78539 464 aa15.3■□□□□ 0.04
SMARCA4-215ENST00000590574 ATPAF1Q5TC12 328 aaPredicted RBP15.3■□□□□ 0.04
SMARCA4-215ENST00000590574 WDR5BQ86VZ2 330 aa15.3■□□□□ 0.04
SMARCA4-215ENST00000590574 OR13C8Q8NGS7 320 aa15.3■□□□□ 0.04
SMARCA4-215ENST00000590574 ASB5Q8WWX0 329 aa15.3■□□□□ 0.04
SMARCA4-215ENST00000590574 VSIG10L2P0DP72 767 aa15.3■□□□□ 0.04
SMARCA4-215ENST00000590574 KIR3DL2P43630 455 aa15.3■□□□□ 0.04
SMARCA4-215ENST00000590574 UBE2KP61086 200 aa15.3■□□□□ 0.04
SMARCA4-215ENST00000590574 DEGS2Q6QHC5 323 aa15.3■□□□□ 0.04
SMARCA4-215ENST00000590574 RHBDD1Q8TEB9 315 aa15.3■□□□□ 0.04
SMARCA4-215ENST00000590574 SEH1LQ96EE3 360 aa15.3■□□□□ 0.04
SMARCA4-215ENST00000590574 ENY2Q9NPA8 101 aa15.3■□□□□ 0.04
SMARCA4-215ENST00000590574 PIN1P1O15428 100 aa15.3■□□□□ 0.04
SMARCA4-215ENST00000590574 OR13C7P0DN81 318 aa15.3■□□□□ 0.04
SMARCA4-215ENST00000590574 OR3A4PP47883 348 aa15.3■□□□□ 0.04
SMARCA4-215ENST00000590574 RPS19BP1Q86WX3 136 aaKnown RBP15.3■□□□□ 0.04
SMARCA4-215ENST00000590574 OIT3Q8WWZ8 545 aa15.3■□□□□ 0.04
SMARCA4-215ENST00000590574 ASB10Q8WXI3 467 aa15.3■□□□□ 0.04
SMARCA4-215ENST00000590574 BOKQ9UMX3 212 aaPredicted RBP15.3■□□□□ 0.04
SMARCA4-215ENST00000590574 DCTN6O00399 190 aa15.3■□□□□ 0.04
SMARCA4-215ENST00000590574 B3GALNT1O75752 331 aa15.3■□□□□ 0.04
SMARCA4-215ENST00000590574 MPC2O95563 127 aa15.3■□□□□ 0.04
SMARCA4-215ENST00000590574 HIST1H1DP16402 221 aaKnown RBP15.3■□□□□ 0.04
SMARCA4-215ENST00000590574 OR9K2Q8NGE7 335 aa15.3■□□□□ 0.04
SMARCA4-215ENST00000590574 TMEM74BQ9NUR3 256 aa15.3■□□□□ 0.04
SMARCA4-215ENST00000590574 VWA8A3KMH1 1905 aa15.29■□□□□ 0.04
SMARCA4-215ENST00000590574 HSD17B6O14756 317 aa15.29■□□□□ 0.04
SMARCA4-215ENST00000590574 OR5H8P0DN80 308 aa15.29■□□□□ 0.04
SMARCA4-215ENST00000590574 SOHLH1Q5JUK2 328 aa15.29■□□□□ 0.04
SMARCA4-215ENST00000590574 BVESQ8NE79 360 aa15.29■□□□□ 0.04
SMARCA4-215ENST00000590574 OCSTAMPQ9BR26 566 aa15.29■□□□□ 0.04
SMARCA4-215ENST00000590574 KPTNQ9Y664 436 aa15.29■□□□□ 0.04
SMARCA4-215ENST00000590574 CNTRLQ7Z7A1 2325 aa15.29■□□□□ 0.04
SMARCA4-215ENST00000590574 IGHV1OR21-1A0A087WYE8 117 aa15.29■□□□□ 0.04
SMARCA4-215ENST00000590574 PIAS2O75928 621 aa15.29■□□□□ 0.04
SMARCA4-215ENST00000590574 SLC34A2O95436 690 aa15.29■□□□□ 0.04
SMARCA4-215ENST00000590574 DUSP1P28562 367 aa15.29■□□□□ 0.04
SMARCA4-215ENST00000590574 DPPA2Q7Z7J5 298 aa15.29■□□□□ 0.04
SMARCA4-215ENST00000590574 REEP6Q96HR9 211 aa15.29■□□□□ 0.04
SMARCA4-215ENST00000590574 CALHM2Q9HA72 323 aa15.29■□□□□ 0.04
SMARCA4-215ENST00000590574 GPR137BO60478 399 aa15.29■□□□□ 0.04
SMARCA4-215ENST00000590574 ASAH2BP0C7U1 165 aa15.29■□□□□ 0.04
SMARCA4-215ENST00000590574 TMEM182Q6ZP80 229 aaPredicted RBP15.29■□□□□ 0.04
SMARCA4-215ENST00000590574 LRRTM1Q86UE6 522 aa15.29■□□□□ 0.04
SMARCA4-215ENST00000590574 OR10G3Q8NGC4 313 aa15.29■□□□□ 0.04
SMARCA4-215ENST00000590574 SIT1Q9Y3P8 196 aa15.29■□□□□ 0.04
SMARCA4-215ENST00000590574 ST8SIA3O43173 380 aa15.29■□□□□ 0.04
SMARCA4-215ENST00000590574 TPPPO94811 219 aa15.29■□□□□ 0.04
SMARCA4-215ENST00000590574 ICAM2P13598 275 aa15.29■□□□□ 0.04
SMARCA4-215ENST00000590574 GALNSP34059 522 aa15.29■□□□□ 0.04
SMARCA4-215ENST00000590574 ALDH3B1P43353 468 aa15.29■□□□□ 0.04
SMARCA4-215ENST00000590574 ZNF266Q14584 549 aa15.29■□□□□ 0.04
SMARCA4-215ENST00000590574 OR51F2Q8NH61 342 aa15.29■□□□□ 0.04
SMARCA4-215ENST00000590574 PHF7Q9BWX1 381 aaPredicted RBP15.29■□□□□ 0.04
SMARCA4-215ENST00000590574 ZNF354AO60765 605 aaPredicted RBP15.28■□□□□ 0.04
SMARCA4-215ENST00000590574 FPR2P25090 351 aa15.28■□□□□ 0.04
SMARCA4-215ENST00000590574 SHBQ15464 509 aa15.28■□□□□ 0.04
SMARCA4-215ENST00000590574 SMUG1Q53HV7 270 aa15.28■□□□□ 0.04
SMARCA4-215ENST00000590574 UQCC3Q6UW78 93 aa15.28■□□□□ 0.04
SMARCA4-215ENST00000590574 HSD17B13Q7Z5P4 300 aaPredicted RBP15.28■□□□□ 0.04
SMARCA4-215ENST00000590574 TCEAL7Q9BRU2 100 aa15.28■□□□□ 0.04
SMARCA4-215ENST00000590574 TNFSF11O14788 317 aa15.28■□□□□ 0.04
SMARCA4-215ENST00000590574 SHOXO15266 292 aa15.28■□□□□ 0.04
SMARCA4-215ENST00000590574 CTSBP07858 339 aa15.28■□□□□ 0.04
SMARCA4-215ENST00000590574 SLC30A7Q8NEW0 376 aa15.28■□□□□ 0.04
SMARCA4-215ENST00000590574 HDGFL3Q9Y3E1 203 aa15.28■□□□□ 0.04
SMARCA4-215ENST00000590574 A0A1W2PQD3 144 aa15.28■□□□□ 0.04
SMARCA4-215ENST00000590574 PIGPP57054 158 aa15.28■□□□□ 0.04
SMARCA4-215ENST00000590574 ZNF658BQ4V348 819 aaPredicted RBP15.28■□□□□ 0.04
SMARCA4-215ENST00000590574 AADACL3Q5VUY0 350 aa15.28■□□□□ 0.04
SMARCA4-215ENST00000590574 SLC22A18ASQ8N1D0 253 aa15.28■□□□□ 0.04
SMARCA4-215ENST00000590574 OR14K1Q8NGZ2 314 aa15.28■□□□□ 0.04
SMARCA4-215ENST00000590574 ST7LQ8TDW4 575 aa15.28■□□□□ 0.04
SMARCA4-215ENST00000590574 ARPC4-TTLL3A0A0A6YYG9 625 aa15.28■□□□□ 0.04
SMARCA4-215ENST00000590574 SPRY1O43609 319 aaPredicted RBP15.28■□□□□ 0.04
SMARCA4-215ENST00000590574 ANKRD37Q7Z713 158 aa15.28■□□□□ 0.04
SMARCA4-215ENST00000590574 SPACA9Q96E40 222 aaPredicted RBP15.28■□□□□ 0.04
SMARCA4-215ENST00000590574 MS4A7Q9GZW8 240 aaPredicted RBP15.28■□□□□ 0.04
SMARCA4-215ENST00000590574 GHRLQ9UBU3 117 aa15.28■□□□□ 0.04
SMARCA4-215ENST00000590574 CDC14BO60729 498 aa15.27■□□□□ 0.04
SMARCA4-215ENST00000590574 LRP3O75074 770 aa15.27■□□□□ 0.04
SMARCA4-215ENST00000590574 ATG12O94817 140 aa15.27■□□□□ 0.04
SMARCA4-215ENST00000590574 GLRA1P23415 457 aa15.27■□□□□ 0.04
SMARCA4-215ENST00000590574 ECH1Q13011 328 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms