RNA–Protein interactions for RNA: ENST00000589828.1

VAT1-207, Transcript of vesicle amine transport 1, humanhuman

TSL 2

Gene VAT1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-207ENST00000589828 ATPAF1Q5TC12 328 aaPredicted RBP6.4□□□□□ -1.38
VAT1-207ENST00000589828 STUMQ69YW2 141 aa6.4□□□□□ -1.38
VAT1-207ENST00000589828 CCDC121Q6ZUS5 278 aa6.4□□□□□ -1.38
VAT1-207ENST00000589828 PTCHD4Q6ZW05 846 aa6.4□□□□□ -1.38
VAT1-207ENST00000589828 SLC36A1Q7Z2H8 476 aa6.4□□□□□ -1.38
VAT1-207ENST00000589828 MRPL21Q7Z2W9 205 aaKnown RBP6.4□□□□□ -1.38
VAT1-207ENST00000589828 LHFPL4Q7Z7J7 247 aa6.4□□□□□ -1.38
VAT1-207ENST00000589828 PATL1Q86TB9 770 aaKnown RBP6.4□□□□□ -1.38
VAT1-207ENST00000589828 ANKRD13BQ86YJ7 626 aa6.4□□□□□ -1.38
VAT1-207ENST00000589828 GLB1L2Q8IW92 636 aa6.4□□□□□ -1.38
VAT1-207ENST00000589828 LINC00482Q8N8I6 264 aa6.4□□□□□ -1.38
VAT1-207ENST00000589828 GJC3Q8NFK1 279 aa6.4□□□□□ -1.38
VAT1-207ENST00000589828 OR5AU1Q8NGC0 362 aa6.4□□□□□ -1.38
VAT1-207ENST00000589828 OR2AE1Q8NHA4 323 aa6.4□□□□□ -1.38
VAT1-207ENST00000589828 H1FXQ92522 213 aaKnown RBP6.4□□□□□ -1.38
VAT1-207ENST00000589828 DUS3LQ96G46 650 aaKnown RBP6.4□□□□□ -1.38
VAT1-207ENST00000589828 TSSK2Q96PF2 358 aa6.4□□□□□ -1.38
VAT1-207ENST00000589828 TMEM109Q9BVC6 243 aa6.4□□□□□ -1.38
VAT1-207ENST00000589828 SLC22A4Q9H015 551 aa6.4□□□□□ -1.38
VAT1-207ENST00000589828 NUAK2Q9H093 628 aa6.4□□□□□ -1.38
VAT1-207ENST00000589828 PPP1R3EQ9H7J1 279 aa6.4□□□□□ -1.38
VAT1-207ENST00000589828 ELL3Q9HB65 397 aaPredicted RBP6.4□□□□□ -1.38
VAT1-207ENST00000589828 SSU72Q9NP77 194 aaKnown RBP6.4□□□□□ -1.38
VAT1-207ENST00000589828 PNRC2Q9NPJ4 139 aaKnown RBP6.4□□□□□ -1.38
VAT1-207ENST00000589828 CORO2BQ9UQ03 480 aa6.4□□□□□ -1.38
VAT1-207ENST00000589828 POLR1DQ9Y2S0 133 aa6.4□□□□□ -1.38
VAT1-207ENST00000589828 TRBV23-1A0A0A0MS06 115 aa6.39□□□□□ -1.39
VAT1-207ENST00000589828 NKX6-3A6NJ46 265 aa6.39□□□□□ -1.39
VAT1-207ENST00000589828 POLR3GO15318 223 aaPredicted RBP6.39□□□□□ -1.39
VAT1-207ENST00000589828 SYNGR1O43759 233 aa6.39□□□□□ -1.39
VAT1-207ENST00000589828 AHCYL1O43865 530 aa6.39□□□□□ -1.39
VAT1-207ENST00000589828 DUS4LO95620 317 aaKnown RBP6.39□□□□□ -1.39
VAT1-207ENST00000589828 CDKN2AP42771 156 aaKnown RBP6.39□□□□□ -1.39
VAT1-207ENST00000589828 SLC9A3P48764 834 aa6.39□□□□□ -1.39
VAT1-207ENST00000589828 ERVFRD-1P60508 538 aa6.39□□□□□ -1.39
VAT1-207ENST00000589828 TRAP1Q12931 704 aaKnown RBP6.39□□□□□ -1.39
VAT1-207ENST00000589828 MALLQ13021 153 aa6.39□□□□□ -1.39
VAT1-207ENST00000589828 LRRC10Q5BKY1 277 aa6.39□□□□□ -1.39
VAT1-207ENST00000589828 SLC18B1Q6NT16 456 aa6.39□□□□□ -1.39
VAT1-207ENST00000589828 EPGNQ6UW88 154 aa6.39□□□□□ -1.39
VAT1-207ENST00000589828 C10orf99Q6UWK7 81 aa6.39□□□□□ -1.39
VAT1-207ENST00000589828 WDR82Q6UXN9 313 aa6.39□□□□□ -1.39
VAT1-207ENST00000589828 ETV3LQ6ZN32 361 aa6.39□□□□□ -1.39
VAT1-207ENST00000589828 CCDC80Q76M96 950 aa6.39□□□□□ -1.39
VAT1-207ENST00000589828 OAFQ86UD1 273 aa6.39□□□□□ -1.39
VAT1-207ENST00000589828 LINC00346Q8IVM7 164 aa6.39□□□□□ -1.39
VAT1-207ENST00000589828 NRMQ8IXM6 262 aa6.39□□□□□ -1.39
VAT1-207ENST00000589828 MKXQ8IYA7 352 aa6.39□□□□□ -1.39
VAT1-207ENST00000589828 C11orf42Q8N5U0 333 aa6.39□□□□□ -1.39
VAT1-207ENST00000589828 ANKRD42Q8N9B4 389 aa6.39□□□□□ -1.39
VAT1-207ENST00000589828 FAM156AQ8NDB6 213 aa6.39□□□□□ -1.39
VAT1-207ENST00000589828 OR9Q1Q8NGQ5 310 aa6.39□□□□□ -1.39
VAT1-207ENST00000589828 SLC26A7Q8TE54 656 aa6.39□□□□□ -1.39
VAT1-207ENST00000589828 MYDGFQ969H8 173 aa6.39□□□□□ -1.39
VAT1-207ENST00000589828 ZNF570Q96NI8 536 aa6.39□□□□□ -1.39
VAT1-207ENST00000589828 GAFA1Q96PS6 74 aa6.39□□□□□ -1.39
VAT1-207ENST00000589828 CGREF1Q99674 301 aa6.39□□□□□ -1.39
VAT1-207ENST00000589828 CHID1Q9BWS9 393 aa6.39□□□□□ -1.39
VAT1-207ENST00000589828 POLR2J2Q9GZM3 115 aaKnown RBP6.39□□□□□ -1.39
VAT1-207ENST00000589828 PRSS22Q9GZN4 317 aa6.39□□□□□ -1.39
VAT1-207ENST00000589828 POLR2J3Q9H1A7 115 aaKnown RBP6.39□□□□□ -1.39
VAT1-207ENST00000589828 WDR13Q9H1Z4 485 aa6.39□□□□□ -1.39
VAT1-207ENST00000589828 KAT8Q9H7Z6 458 aaKnown RBP6.39□□□□□ -1.39
VAT1-207ENST00000589828 RNPEPL1Q9HAU8 725 aa6.39□□□□□ -1.39
VAT1-207ENST00000589828 KCNK9Q9NPC2 374 aa6.39□□□□□ -1.39
VAT1-207ENST00000589828 SNTG1Q9NSN8 517 aa6.39□□□□□ -1.39
VAT1-207ENST00000589828 GRHPRQ9UBQ7 328 aa6.39□□□□□ -1.39
VAT1-207ENST00000589828 ZNF391Q9UJN7 358 aa6.39□□□□□ -1.39
VAT1-207ENST00000589828 A4GNTQ9UNA3 340 aa6.39□□□□□ -1.39
VAT1-207ENST00000589828 AURKCQ9UQB9 309 aa6.39□□□□□ -1.39
VAT1-207ENST00000589828 TCF19Q9Y242 345 aa6.39□□□□□ -1.39
VAT1-207ENST00000589828 LSM4Q9Y4Z0 139 aaKnown RBP6.39□□□□□ -1.39
VAT1-207ENST00000589828 LYSTQ99698 3801 aa6.38□□□□□ -1.39
VAT1-207ENST00000589828 TCRBV4S1A1TA0A5B7 111 aa6.38□□□□□ -1.39
VAT1-207ENST00000589828 GGT3PA6NGU5 568 aa6.38□□□□□ -1.39
VAT1-207ENST00000589828 FAM90A8PA6NJQ4 464 aa6.38□□□□□ -1.39
VAT1-207ENST00000589828 EFCAB9A8MZ26 197 aa6.38□□□□□ -1.39
VAT1-207ENST00000589828 XKRYO14609 159 aa6.38□□□□□ -1.39
VAT1-207ENST00000589828 RGS16O15492 202 aaPredicted RBP6.38□□□□□ -1.39
VAT1-207ENST00000589828 JUNBP17275 347 aaPredicted RBP6.38□□□□□ -1.39
VAT1-207ENST00000589828 LMO1P25800 156 aa6.38□□□□□ -1.39
VAT1-207ENST00000589828 SDHAP31040 664 aa6.38□□□□□ -1.39
VAT1-207ENST00000589828 GGT2P36268 569 aa6.38□□□□□ -1.39
VAT1-207ENST00000589828 MDH1P40925 334 aaKnown RBP6.38□□□□□ -1.39
VAT1-207ENST00000589828 VDAC2P45880 294 aaPredicted RBP6.38□□□□□ -1.39
VAT1-207ENST00000589828 GPR4P46093 362 aa6.38□□□□□ -1.39
VAT1-207ENST00000589828 SLC18A1P54219 525 aa6.38□□□□□ -1.39
VAT1-207ENST00000589828 GMFBP60983 142 aa6.38□□□□□ -1.39
VAT1-207ENST00000589828 PRKCDQ05655 676 aa6.38□□□□□ -1.39
VAT1-207ENST00000589828 ECH1Q13011 328 aa6.38□□□□□ -1.39
VAT1-207ENST00000589828 KRR1Q13601 381 aaKnown RBP6.38□□□□□ -1.39
VAT1-207ENST00000589828 VMACQ2NL98 169 aa6.38□□□□□ -1.39
VAT1-207ENST00000589828 KRT71Q3SY84 523 aa6.38□□□□□ -1.39
VAT1-207ENST00000589828 AGKQ53H12 422 aa6.38□□□□□ -1.39
VAT1-207ENST00000589828 TNFAIP8L3Q5GJ75 292 aa6.38□□□□□ -1.39
VAT1-207ENST00000589828 GLYATL3Q5SZD4 288 aa6.38□□□□□ -1.39
VAT1-207ENST00000589828 LDLRAD2Q5SZI1 272 aa6.38□□□□□ -1.39
VAT1-207ENST00000589828 TBPL2Q6SJ96 375 aa6.38□□□□□ -1.39
VAT1-207ENST00000589828 ZNF788Q6ZQV5 615 aa6.38□□□□□ -1.39
VAT1-207ENST00000589828 TSEN54Q7Z6J9 526 aaKnown RBP6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms