RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 OR10S1Q8NGN2 331 aa16.46■□□□□ 0.23
DDX39A-206ENST00000587730 OR6X1Q8NH79 312 aa16.46■□□□□ 0.23
DDX39A-206ENST00000587730 SLC25A43Q8WUT9 341 aaPredicted RBP16.46■□□□□ 0.23
DDX39A-206ENST00000587730 PPP4R1LQ9P1A2 415 aa16.46■□□□□ 0.23
DDX39A-206ENST00000587730 WIF1Q9Y5W5 379 aa16.46■□□□□ 0.23
DDX39A-206ENST00000587730 LHFPL6Q9Y693 200 aa16.46■□□□□ 0.23
DDX39A-206ENST00000587730 FAM74A7A6NL05 159 aa16.45■□□□□ 0.22
DDX39A-206ENST00000587730 TOX3O15405 576 aaPredicted RBP16.45■□□□□ 0.22
DDX39A-206ENST00000587730 MPIG6BO95866 241 aa16.45■□□□□ 0.22
DDX39A-206ENST00000587730 SPTBP11277 2137 aa16.45■□□□□ 0.22
DDX39A-206ENST00000587730 FBXW4P57775 412 aa16.45■□□□□ 0.22
DDX39A-206ENST00000587730 KIF26BQ2KJY2 2108 aa16.45■□□□□ 0.22
DDX39A-206ENST00000587730 FAM74A3Q4VXF1 159 aa16.45■□□□□ 0.22
DDX39A-206ENST00000587730 RHBDD2Q6NTF9 364 aa16.45■□□□□ 0.22
DDX39A-206ENST00000587730 HAGHLQ6PII5 290 aaPredicted RBP16.45■□□□□ 0.22
DDX39A-206ENST00000587730 UNQ6126/PRO20091Q6UXV3 157 aa16.45■□□□□ 0.22
DDX39A-206ENST00000587730 LANCL3Q6ZV70 420 aa16.45■□□□□ 0.22
DDX39A-206ENST00000587730 RAB11FIP2Q7L804 512 aa16.45■□□□□ 0.22
DDX39A-206ENST00000587730 ABHD12BQ7Z5M8 362 aaPredicted RBP16.45■□□□□ 0.22
DDX39A-206ENST00000587730 OR5AS1Q8N127 324 aa16.45■□□□□ 0.22
DDX39A-206ENST00000587730 ZNF501Q96CX3 271 aaPredicted RBP16.45■□□□□ 0.22
DDX39A-206ENST00000587730 C2orf50Q96LR7 162 aa16.45■□□□□ 0.22
DDX39A-206ENST00000587730 RNF126Q9BV68 326 aa16.45■□□□□ 0.22
DDX39A-206ENST00000587730 SEC11CQ9BY50 192 aa16.45■□□□□ 0.22
DDX39A-206ENST00000587730 FN3KRPQ9HA64 309 aa16.45■□□□□ 0.22
DDX39A-206ENST00000587730 B3GAT1Q9P2W7 334 aa16.45■□□□□ 0.22
DDX39A-206ENST00000587730 LOC102725191A0A1B0GVB3 256 aa16.45■□□□□ 0.22
DDX39A-206ENST00000587730 MFNGO00587 321 aa16.45■□□□□ 0.22
DDX39A-206ENST00000587730 TLX3O43711 291 aaPredicted RBP16.45■□□□□ 0.22
DDX39A-206ENST00000587730 HCKP08631 526 aa16.45■□□□□ 0.22
DDX39A-206ENST00000587730 PGA4P0DJD7 388 aa16.45■□□□□ 0.22
DDX39A-206ENST00000587730 PGA3P0DJD8 388 aa16.45■□□□□ 0.22
DDX39A-206ENST00000587730 GLB1P16278 677 aa16.45■□□□□ 0.22
DDX39A-206ENST00000587730 CTSSP25774 331 aa16.45■□□□□ 0.22
DDX39A-206ENST00000587730 OR3A2P47893 321 aa16.45■□□□□ 0.22
DDX39A-206ENST00000587730 MYBPHQ13203 477 aa16.45■□□□□ 0.22
DDX39A-206ENST00000587730 COL19A1Q14993 1142 aa16.45■□□□□ 0.22
DDX39A-206ENST00000587730 HYAL4Q2M3T9 481 aa16.45■□□□□ 0.22
DDX39A-206ENST00000587730 SLC22A6Q4U2R8 563 aa16.45■□□□□ 0.22
DDX39A-206ENST00000587730 C1orf189Q5VU69 101 aa16.45■□□□□ 0.22
DDX39A-206ENST00000587730 LHFPL1Q86WI0 220 aa16.45■□□□□ 0.22
DDX39A-206ENST00000587730 COMMD2Q86X83 199 aa16.45■□□□□ 0.22
DDX39A-206ENST00000587730 FAM89BQ8N5H3 189 aa16.45■□□□□ 0.22
DDX39A-206ENST00000587730 APCDD1LQ8NCL9 501 aa16.45■□□□□ 0.22
DDX39A-206ENST00000587730 NFAM1Q8NET5 270 aaPredicted RBP16.45■□□□□ 0.22
DDX39A-206ENST00000587730 EMG1Q92979 244 aaKnown RBP16.45■□□□□ 0.22
DDX39A-206ENST00000587730 C1orf147Q96MC9 270 aaPredicted RBP16.45■□□□□ 0.22
DDX39A-206ENST00000587730 NECAB3Q96P71 396 aaPredicted RBP16.45■□□□□ 0.22
DDX39A-206ENST00000587730 OR10A2Q9H208 303 aa16.45■□□□□ 0.22
DDX39A-206ENST00000587730 ZNF768Q9H5H4 540 aaKnown RBP16.45■□□□□ 0.22
DDX39A-206ENST00000587730 C5orf66Q9H5L9 145 aa16.45■□□□□ 0.22
DDX39A-206ENST00000587730 FGF21Q9NSA1 209 aa16.45■□□□□ 0.22
DDX39A-206ENST00000587730 LPAR3Q9UBY5 353 aa16.45■□□□□ 0.22
DDX39A-206ENST00000587730 THADAQ6YHU6 1953 aa16.44■□□□□ 0.22
DDX39A-206ENST00000587730 SERPINE3A8MV23 424 aa16.44■□□□□ 0.22
DDX39A-206ENST00000587730 AMY2BP19961 511 aa16.44■□□□□ 0.22
DDX39A-206ENST00000587730 PJVKQ0ZLH3 352 aa16.44■□□□□ 0.22
DDX39A-206ENST00000587730 ECH1Q13011 328 aa16.44■□□□□ 0.22
DDX39A-206ENST00000587730 DHRS7BQ6IAN0 325 aaPredicted RBP16.44■□□□□ 0.22
DDX39A-206ENST00000587730 SLC25A47Q6Q0C1 308 aa16.44■□□□□ 0.22
DDX39A-206ENST00000587730 CLEC18BQ6UXF7 455 aa16.44■□□□□ 0.22
DDX39A-206ENST00000587730 ANKRD37Q7Z713 158 aa16.44■□□□□ 0.22
DDX39A-206ENST00000587730 STT3BQ8TCJ2 826 aa16.44■□□□□ 0.22
DDX39A-206ENST00000587730 PAQR8Q8TEZ7 354 aa16.44■□□□□ 0.22
DDX39A-206ENST00000587730 RLN3Q8WXF3 142 aa16.44■□□□□ 0.22
DDX39A-206ENST00000587730 CYTL1Q9NRR1 136 aa16.44■□□□□ 0.22
DDX39A-206ENST00000587730 KLRF1Q9NZS2 232 aa16.44■□□□□ 0.22
DDX39A-206ENST00000587730 C2CD4DB7Z1M9 353 aa16.43■□□□□ 0.22
DDX39A-206ENST00000587730 PIAS2O75928 621 aa16.43■□□□□ 0.22
DDX39A-206ENST00000587730 HEXBP07686 556 aa16.43■□□□□ 0.22
DDX39A-206ENST00000587730 ARFRP1Q13795 201 aa16.43■□□□□ 0.22
DDX39A-206ENST00000587730 PLPPR5Q32ZL2 321 aa16.43■□□□□ 0.22
DDX39A-206ENST00000587730 PUSL1Q8N0Z8 303 aaKnown RBP16.43■□□□□ 0.22
DDX39A-206ENST00000587730 OR8B12Q8NGG6 310 aa16.43■□□□□ 0.22
DDX39A-206ENST00000587730 OXGR1Q96P68 337 aa16.43■□□□□ 0.22
DDX39A-206ENST00000587730 GPER1Q99527 375 aa16.43■□□□□ 0.22
DDX39A-206ENST00000587730 FOXQ1Q9C009 403 aa16.43■□□□□ 0.22
DDX39A-206ENST00000587730 SLC7A5P2Q9GIP4 190 aa16.43■□□□□ 0.22
DDX39A-206ENST00000587730 GPR84Q9NQS5 396 aa16.43■□□□□ 0.22
DDX39A-206ENST00000587730 MLXQ9UH92 298 aa16.43■□□□□ 0.22
DDX39A-206ENST00000587730 VDAC3Q9Y277 283 aa16.43■□□□□ 0.22
DDX39A-206ENST00000587730 POMT1Q9Y6A1 747 aa16.43■□□□□ 0.22
DDX39A-206ENST00000587730 F8W036 122 aa16.42■□□□□ 0.22
DDX39A-206ENST00000587730 PRF1P14222 555 aa16.42■□□□□ 0.22
DDX39A-206ENST00000587730 EIF1P41567 113 aaKnown RBP16.42■□□□□ 0.22
DDX39A-206ENST00000587730 ZNF121P58317 390 aaPredicted RBP16.42■□□□□ 0.22
DDX39A-206ENST00000587730 BLOC1S1P78537 153 aa16.42■□□□□ 0.22
DDX39A-206ENST00000587730 DCDP81605 110 aaKnown RBP16.42■□□□□ 0.22
DDX39A-206ENST00000587730 PLAC9Q5JTB6 97 aa16.42■□□□□ 0.22
DDX39A-206ENST00000587730 ZNF585AQ6P3V2 769 aa16.42■□□□□ 0.22
DDX39A-206ENST00000587730 LINC00518Q8N0U6 118 aa16.42■□□□□ 0.22
DDX39A-206ENST00000587730 ZSCAN4Q8NAM6 433 aaPredicted RBP16.42■□□□□ 0.22
DDX39A-206ENST00000587730 SSC4DQ8WTU2 575 aa16.42■□□□□ 0.22
DDX39A-206ENST00000587730 PMEPA1Q969W9 287 aa16.42■□□□□ 0.22
DDX39A-206ENST00000587730 C10orf35Q96D05 121 aa16.42■□□□□ 0.22
DDX39A-206ENST00000587730 NICN1Q9BSH3 213 aa16.42■□□□□ 0.22
DDX39A-206ENST00000587730 SEC61A2Q9H9S3 476 aa16.42■□□□□ 0.22
DDX39A-206ENST00000587730 A0A0A6YYD4 124 aa16.42■□□□□ 0.22
DDX39A-206ENST00000587730 CRTAPO75718 401 aaPredicted RBP16.42■□□□□ 0.22
DDX39A-206ENST00000587730 HEXAP06865 529 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms