RNA–Protein interactions for RNA: ENST00000587338.1

SDF2-204, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-204ENST00000587338 SNTNA6NMZ2 147 aa7.12□□□□□ -1.27
SDF2-204ENST00000587338 PRR23D1E9PI22 279 aaPredicted RBP7.12□□□□□ -1.27
SDF2-204ENST00000587338 E9PQ18 207 aa7.12□□□□□ -1.27
SDF2-204ENST00000587338 TMEM178BH3BS89 294 aa7.12□□□□□ -1.27
SDF2-204ENST00000587338 H3BSA7 217 aa7.12□□□□□ -1.27
SDF2-204ENST00000587338 SLC1A7O00341 560 aa7.12□□□□□ -1.27
SDF2-204ENST00000587338 XKRYO14609 159 aa7.12□□□□□ -1.27
SDF2-204ENST00000587338 XPNPEP2O43895 674 aa7.12□□□□□ -1.27
SDF2-204ENST00000587338 ENTPD6O75354 484 aa7.12□□□□□ -1.27
SDF2-204ENST00000587338 IGHV4-59P01825 116 aa7.12□□□□□ -1.27
SDF2-204ENST00000587338 CD14P08571 375 aa7.12□□□□□ -1.27
SDF2-204ENST00000587338 PRR23D2P0DMB1 279 aaPredicted RBP7.12□□□□□ -1.27
SDF2-204ENST00000587338 ATP6V1B1P15313 513 aa7.12□□□□□ -1.27
SDF2-204ENST00000587338 ZNF32P17041 273 aa7.12□□□□□ -1.27
SDF2-204ENST00000587338 PITPNBP48739 271 aa7.12□□□□□ -1.27
SDF2-204ENST00000587338 LOXL3P58215 753 aa7.12□□□□□ -1.27
SDF2-204ENST00000587338 BPIFB3P59826 476 aa7.12□□□□□ -1.27
SDF2-204ENST00000587338 RPS7P62081 194 aaKnown RBP7.12□□□□□ -1.27
SDF2-204ENST00000587338 SNRPGP62308 76 aaKnown RBP7.12□□□□□ -1.27
SDF2-204ENST00000587338 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.12□□□□□ -1.27
SDF2-204ENST00000587338 PSG7Q13046 419 aa7.12□□□□□ -1.27
SDF2-204ENST00000587338 FHL1Q13642 323 aa7.12□□□□□ -1.27
SDF2-204ENST00000587338 KLHL12Q53G59 568 aa7.12□□□□□ -1.27
SDF2-204ENST00000587338 VAX1Q5SQQ9 334 aa7.12□□□□□ -1.27
SDF2-204ENST00000587338 PLBD1Q6P4A8 553 aa7.12□□□□□ -1.27
SDF2-204ENST00000587338 Q6ZR03 302 aa7.12□□□□□ -1.27
SDF2-204ENST00000587338 NLRC3Q7RTR2 1065 aa7.12□□□□□ -1.27
SDF2-204ENST00000587338 CPOQ8IVL8 374 aa7.12□□□□□ -1.27
SDF2-204ENST00000587338 LNX2Q8N448 690 aa7.12□□□□□ -1.27
SDF2-204ENST00000587338 CYB561A3Q8NBI2 242 aa7.12□□□□□ -1.27
SDF2-204ENST00000587338 NOXO1Q8NFA2 376 aa7.12□□□□□ -1.27
SDF2-204ENST00000587338 OR8B3Q8NGG8 313 aa7.12□□□□□ -1.27
SDF2-204ENST00000587338 APH1BQ8WW43 257 aa7.12□□□□□ -1.27
SDF2-204ENST00000587338 NEIL1Q96FI4 390 aaPredicted RBP7.12□□□□□ -1.27
SDF2-204ENST00000587338 Q96M85 177 aa7.12□□□□□ -1.27
SDF2-204ENST00000587338 OR2V2Q96R30 315 aa7.12□□□□□ -1.27
SDF2-204ENST00000587338 OR8B2Q96RD0 313 aa7.12□□□□□ -1.27
SDF2-204ENST00000587338 CDADC1Q9BWV3 514 aa7.12□□□□□ -1.27
SDF2-204ENST00000587338 OR51V1Q9H2C8 321 aa7.12□□□□□ -1.27
SDF2-204ENST00000587338 RERGLQ9H628 205 aa7.12□□□□□ -1.27
SDF2-204ENST00000587338 MED20Q9H944 212 aa7.12□□□□□ -1.27
SDF2-204ENST00000587338 SIAEQ9HAT2 523 aa7.12□□□□□ -1.27
SDF2-204ENST00000587338 MIOXQ9UGB7 285 aa7.12□□□□□ -1.27
SDF2-204ENST00000587338 SCOCQ9UIL1 159 aa7.12□□□□□ -1.27
SDF2-204ENST00000587338 SNX5Q9Y5X3 404 aa7.12□□□□□ -1.27
SDF2-204ENST00000587338 TET2Q6N021 2002 aaPredicted RBP7.11□□□□□ -1.27
SDF2-204ENST00000587338 DNAH3Q8TD57 4116 aa7.11□□□□□ -1.27
SDF2-204ENST00000587338 H7C1C5 153 aa7.11□□□□□ -1.27
SDF2-204ENST00000587338 TNFRSF13BO14836 293 aaPredicted RBP7.11□□□□□ -1.27
SDF2-204ENST00000587338 PLXNB1O43157 2135 aa7.11□□□□□ -1.27
SDF2-204ENST00000587338 WBP4O75554 376 aaKnown RBP7.11□□□□□ -1.27
SDF2-204ENST00000587338 CYB5R3P00387 301 aaPredicted RBP7.11□□□□□ -1.27
SDF2-204ENST00000587338 RENP00797 406 aa7.11□□□□□ -1.27
SDF2-204ENST00000587338 OPN1MWP04001 364 aa7.11□□□□□ -1.27
SDF2-204ENST00000587338 SFTPBP07988 381 aa7.11□□□□□ -1.27
SDF2-204ENST00000587338 OPN1MW2P0DN77 364 aa7.11□□□□□ -1.27
SDF2-204ENST00000587338 OPN1MW3P0DN78 364 aa7.11□□□□□ -1.27
SDF2-204ENST00000587338 HIST1H1CP16403 213 aaKnown RBP7.11□□□□□ -1.27
SDF2-204ENST00000587338 GABRB1P18505 474 aa7.11□□□□□ -1.27
SDF2-204ENST00000587338 SDHAP31040 664 aa7.11□□□□□ -1.27
SDF2-204ENST00000587338 ATP6V1E1P36543 226 aa7.11□□□□□ -1.27
SDF2-204ENST00000587338 CENPAP49450 140 aa7.11□□□□□ -1.27
SDF2-204ENST00000587338 LCN6P62502 163 aa7.11□□□□□ -1.27
SDF2-204ENST00000587338 CSNK2BP67870 215 aa7.11□□□□□ -1.27
SDF2-204ENST00000587338 MRPS34P82930 218 aaKnown RBP7.11□□□□□ -1.27
SDF2-204ENST00000587338 PSG4Q00888 419 aa7.11□□□□□ -1.27
SDF2-204ENST00000587338 EGR3Q06889 387 aa7.11□□□□□ -1.27
SDF2-204ENST00000587338 KRR1Q13601 381 aaKnown RBP7.11□□□□□ -1.27
SDF2-204ENST00000587338 CRMP1Q14194 572 aa7.11□□□□□ -1.27
SDF2-204ENST00000587338 SGCAQ16586 387 aa7.11□□□□□ -1.27
SDF2-204ENST00000587338 HIST3H3Q16695 136 aa7.11□□□□□ -1.27
SDF2-204ENST00000587338 MEDAGQ5VYS4 303 aa7.11□□□□□ -1.27
SDF2-204ENST00000587338 DHRS7BQ6IAN0 325 aaPredicted RBP7.11□□□□□ -1.27
SDF2-204ENST00000587338 LAIR2Q6ISS4 152 aa7.11□□□□□ -1.27
SDF2-204ENST00000587338 Q6ZSV7 163 aa7.11□□□□□ -1.27
SDF2-204ENST00000587338 AHSA2Q719I0 299 aa7.11□□□□□ -1.27
SDF2-204ENST00000587338 STX19Q8N4C7 294 aa7.11□□□□□ -1.27
SDF2-204ENST00000587338 LRRC75AQ8NAA5 344 aa7.11□□□□□ -1.27
SDF2-204ENST00000587338 SLC37A3Q8NCC5 494 aa7.11□□□□□ -1.27
SDF2-204ENST00000587338 TSPAN14Q8NG11 270 aa7.11□□□□□ -1.27
SDF2-204ENST00000587338 OR9Q1Q8NGQ5 310 aa7.11□□□□□ -1.27
SDF2-204ENST00000587338 ZNF420Q8TAQ5 688 aaPredicted RBP7.11□□□□□ -1.27
SDF2-204ENST00000587338 FBLIM1Q8WUP2 373 aa7.11□□□□□ -1.27
SDF2-204ENST00000587338 GATAD2BQ8WXI9 593 aa7.11□□□□□ -1.27
SDF2-204ENST00000587338 RFKQ969G6 155 aa7.11□□□□□ -1.27
SDF2-204ENST00000587338 C4orf45Q96LM5 186 aa7.11□□□□□ -1.27
SDF2-204ENST00000587338 ZNF582Q96NG8 517 aaPredicted RBP7.11□□□□□ -1.27
SDF2-204ENST00000587338 GPX7Q96SL4 187 aaPredicted RBP7.11□□□□□ -1.27
SDF2-204ENST00000587338 NMNAT3Q96T66 252 aa7.11□□□□□ -1.27
SDF2-204ENST00000587338 TMEM246Q9BRR3 403 aa7.11□□□□□ -1.27
SDF2-204ENST00000587338 YTHDF1Q9BYJ9 559 aaKnown RBP7.11□□□□□ -1.27
SDF2-204ENST00000587338 FN3KQ9H479 309 aa7.11□□□□□ -1.27
SDF2-204ENST00000587338 ELOVL3Q9HB03 270 aa7.11□□□□□ -1.27
SDF2-204ENST00000587338 TMEM165Q9HC07 324 aa7.11□□□□□ -1.27
SDF2-204ENST00000587338 GCM1Q9NP62 436 aa7.11□□□□□ -1.27
SDF2-204ENST00000587338 NRIP3Q9NQ35 241 aa7.11□□□□□ -1.27
SDF2-204ENST00000587338 CMC2Q9NRP2 79 aa7.11□□□□□ -1.27
SDF2-204ENST00000587338 CLN8Q9UBY8 286 aa7.11□□□□□ -1.27
SDF2-204ENST00000587338 IL19Q9UHD0 177 aa7.11□□□□□ -1.27
SDF2-204ENST00000587338 DOCK11Q5JSL3 2073 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms