RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 COX6B1P14854 86 aa10.95□□□□□ -0.66
VMP1-202ENST00000585847 PPP3CBP16298 524 aa10.95□□□□□ -0.66
VMP1-202ENST00000585847 ZNF20P17024 532 aa10.95□□□□□ -0.66
VMP1-202ENST00000585847 IL32P24001 234 aa10.95□□□□□ -0.66
VMP1-202ENST00000585847 APEX1P27695 318 aaKnown RBP10.95□□□□□ -0.66
VMP1-202ENST00000585847 LOXP28300 417 aaPredicted RBP10.95□□□□□ -0.66
VMP1-202ENST00000585847 ETV6P41212 452 aa10.95□□□□□ -0.66
VMP1-202ENST00000585847 SLC6A9P48067 706 aa10.95□□□□□ -0.66
VMP1-202ENST00000585847 RAB1AP62820 205 aa10.95□□□□□ -0.66
VMP1-202ENST00000585847 FAM189A2Q15884 450 aa10.95□□□□□ -0.66
VMP1-202ENST00000585847 TBC1D28Q2M2D7 210 aa10.95□□□□□ -0.66
VMP1-202ENST00000585847 COLCA1Q6ZS62 124 aa10.95□□□□□ -0.66
VMP1-202ENST00000585847 SPATC1Q76KD6 591 aa10.95□□□□□ -0.66
VMP1-202ENST00000585847 OR5L1Q8NGL2 311 aa10.95□□□□□ -0.66
VMP1-202ENST00000585847 OR13C3Q8NGS6 347 aa10.95□□□□□ -0.66
VMP1-202ENST00000585847 LRRC46Q96FV0 321 aa10.95□□□□□ -0.66
VMP1-202ENST00000585847 ABCB9Q9NP78 766 aa10.95□□□□□ -0.66
VMP1-202ENST00000585847 NOX4Q9NPH5 578 aa10.95□□□□□ -0.66
VMP1-202ENST00000585847 ZNF275Q9NSD4 429 aaPredicted RBP10.95□□□□□ -0.66
VMP1-202ENST00000585847 TBCCD1Q9NVR7 557 aa10.95□□□□□ -0.66
VMP1-202ENST00000585847 B3GNT2Q9NY97 397 aa10.95□□□□□ -0.66
VMP1-202ENST00000585847 NPAP1Q9NZP6 1156 aa10.95□□□□□ -0.66
VMP1-202ENST00000585847 ETV7Q9Y603 341 aa10.95□□□□□ -0.66
VMP1-202ENST00000585847 ANXA2P2A6NMY6 339 aa10.94□□□□□ -0.66
VMP1-202ENST00000585847 CLDN25C9JDP6 229 aa10.94□□□□□ -0.66
VMP1-202ENST00000585847 F5H5K5 113 aa10.94□□□□□ -0.66
VMP1-202ENST00000585847 PATE4P0C8F1 98 aa10.94□□□□□ -0.66
VMP1-202ENST00000585847 CBR1P16152 277 aa10.94□□□□□ -0.66
VMP1-202ENST00000585847 STOMP27105 288 aa10.94□□□□□ -0.66
VMP1-202ENST00000585847 THBS4P35443 961 aa10.94□□□□□ -0.66
VMP1-202ENST00000585847 DDOSTP39656 456 aa10.94□□□□□ -0.66
VMP1-202ENST00000585847 PRKXP51817 358 aa10.94□□□□□ -0.66
VMP1-202ENST00000585847 ZNF45Q02386 682 aa10.94□□□□□ -0.66
VMP1-202ENST00000585847 HNRNPA0Q13151 305 aaKnown RBP10.94□□□□□ -0.66
VMP1-202ENST00000585847 SPANXN2Q5MJ10 180 aa10.94□□□□□ -0.66
VMP1-202ENST00000585847 TIMM23BQ5SRD1 257 aa10.94□□□□□ -0.66
VMP1-202ENST00000585847 GLT8D1Q68CQ7 371 aa10.94□□□□□ -0.66
VMP1-202ENST00000585847 ZNF774Q6NX45 483 aa10.94□□□□□ -0.66
VMP1-202ENST00000585847 SFXN4Q6P4A7 337 aa10.94□□□□□ -0.66
VMP1-202ENST00000585847 METAP1DQ6UB28 335 aaPredicted RBP10.94□□□□□ -0.66
VMP1-202ENST00000585847 BAIAP2L2Q6UXY1 529 aa10.94□□□□□ -0.66
VMP1-202ENST00000585847 MEX3BQ6ZN04 569 aaKnown RBP10.94□□□□□ -0.66
VMP1-202ENST00000585847 UTS2BQ765I0 119 aa10.94□□□□□ -0.66
VMP1-202ENST00000585847 OR8B12Q8NGG6 310 aa10.94□□□□□ -0.66
VMP1-202ENST00000585847 OR6Q1Q8NGQ2 317 aa10.94□□□□□ -0.66
VMP1-202ENST00000585847 TBC1D15Q8TC07 691 aa10.94□□□□□ -0.66
VMP1-202ENST00000585847 C15orf40Q8WUR7 153 aa10.94□□□□□ -0.66
VMP1-202ENST00000585847 SPSB4Q96A44 273 aa10.94□□□□□ -0.66
VMP1-202ENST00000585847 SPOCK3Q9BQ16 436 aa10.94□□□□□ -0.66
VMP1-202ENST00000585847 UQCC2Q9BRT2 126 aa10.94□□□□□ -0.66
VMP1-202ENST00000585847 CXorf56Q9H5V9 222 aa10.94□□□□□ -0.66
VMP1-202ENST00000585847 SLC24A3Q9HC58 644 aa10.94□□□□□ -0.66
VMP1-202ENST00000585847 SMURF1Q9HCE7 757 aa10.94□□□□□ -0.66
VMP1-202ENST00000585847 CRIM1Q9NZV1 1036 aa10.94□□□□□ -0.66
VMP1-202ENST00000585847 ITGB1BP2Q9UKP3 347 aa10.94□□□□□ -0.66
VMP1-202ENST00000585847 PKDREJQ9NTG1 2253 aa10.93□□□□□ -0.66
VMP1-202ENST00000585847 PDZD2O15018 2839 aa10.93□□□□□ -0.66
VMP1-202ENST00000585847 IGKV3-15P01624 115 aa10.93□□□□□ -0.66
VMP1-202ENST00000585847 HLA-HP01893 362 aa10.93□□□□□ -0.66
VMP1-202ENST00000585847 CALCBP10092 127 aa10.93□□□□□ -0.66
VMP1-202ENST00000585847 CD37P11049 281 aa10.93□□□□□ -0.66
VMP1-202ENST00000585847 CD79AP11912 226 aa10.93□□□□□ -0.66
VMP1-202ENST00000585847 CD40LGP29965 261 aa10.93□□□□□ -0.66
VMP1-202ENST00000585847 GNALP38405 381 aa10.93□□□□□ -0.66
VMP1-202ENST00000585847 GALK2Q01415 458 aa10.93□□□□□ -0.66
VMP1-202ENST00000585847 ZNF846Q147U1 533 aa10.93□□□□□ -0.66
VMP1-202ENST00000585847 FAM57BQ71RH2 274 aa10.93□□□□□ -0.66
VMP1-202ENST00000585847 KRT74Q7RTS7 529 aa10.93□□□□□ -0.66
VMP1-202ENST00000585847 MYPOPQ86VE0 399 aaPredicted RBP10.93□□□□□ -0.66
VMP1-202ENST00000585847 COMMD2Q86X83 199 aa10.93□□□□□ -0.66
VMP1-202ENST00000585847 OR6M1Q8NGM8 313 aa10.93□□□□□ -0.66
VMP1-202ENST00000585847 SPSB1Q96BD6 273 aa10.93□□□□□ -0.66
VMP1-202ENST00000585847 ZC3HAV1LQ96H79 300 aaKnown RBP10.93□□□□□ -0.66
VMP1-202ENST00000585847 CEP19Q96LK0 163 aa10.93□□□□□ -0.66
VMP1-202ENST00000585847 LURAP1Q96LR2 239 aa10.93□□□□□ -0.66
VMP1-202ENST00000585847 C6orf62Q9GZU0 229 aaPredicted RBP10.93□□□□□ -0.66
VMP1-202ENST00000585847 TMEM138Q9NPI0 162 aa10.93□□□□□ -0.66
VMP1-202ENST00000585847 GPR84Q9NQS5 396 aa10.93□□□□□ -0.66
VMP1-202ENST00000585847 V9GY05 133 aa10.93□□□□□ -0.66
VMP1-202ENST00000585847 V9GYS6 101 aa10.93□□□□□ -0.66
VMP1-202ENST00000585847 ADGRG4Q8IZF6 3080 aa10.93□□□□□ -0.66
VMP1-202ENST00000585847 CELSR1Q9NYQ6 3014 aa10.93□□□□□ -0.66
VMP1-202ENST00000585847 CADP27708 2225 aa10.92□□□□□ -0.66
VMP1-202ENST00000585847 TUBAL3A6NHL2 446 aa10.92□□□□□ -0.66
VMP1-202ENST00000585847 IFITM5A6NNB3 132 aa10.92□□□□□ -0.66
VMP1-202ENST00000585847 DEFB108AA8MXU0 73 aa10.92□□□□□ -0.66
VMP1-202ENST00000585847 MAGEB3O15480 346 aa10.92□□□□□ -0.66
VMP1-202ENST00000585847 SCGNO76038 276 aa10.92□□□□□ -0.66
VMP1-202ENST00000585847 LCATP04180 440 aa10.92□□□□□ -0.66
VMP1-202ENST00000585847 ALDOBP05062 364 aa10.92□□□□□ -0.66
VMP1-202ENST00000585847 EPXP11678 715 aa10.92□□□□□ -0.66
VMP1-202ENST00000585847 SELEP16581 610 aa10.92□□□□□ -0.66
VMP1-202ENST00000585847 IGFBP3P17936 291 aaPredicted RBP10.92□□□□□ -0.66
VMP1-202ENST00000585847 RAB3AP20336 220 aa10.92□□□□□ -0.66
VMP1-202ENST00000585847 TALDO1P37837 337 aa10.92□□□□□ -0.66
VMP1-202ENST00000585847 KIR2DL3P43628 341 aa10.92□□□□□ -0.66
VMP1-202ENST00000585847 MAP2K3P46734 347 aa10.92□□□□□ -0.66
VMP1-202ENST00000585847 RIPPLY1Q0D2K3 151 aa10.92□□□□□ -0.66
VMP1-202ENST00000585847 OR8B8Q15620 311 aa10.92□□□□□ -0.66
VMP1-202ENST00000585847 ZNF529Q6P280 563 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms