RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 TMEM185BQ9H7F4 350 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 PLGRKTQ9HBL7 147 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 TMBIM4Q9HC24 238 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 ACP6Q9NPH0 428 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 ARMCX1Q9P291 453 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 SLC2A6Q9UGQ3 507 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 CIDEBQ9UHD4 219 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 ZNF639Q9UID6 485 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 ZNF391Q9UJN7 358 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 C3orf18Q9UK00 162 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 GMPPBQ9Y5P6 360 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 SNX10Q9Y5X0 201 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 HECTD1Q9ULT8 2610 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 PPIAL4EA0A075B759 164 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 TNFSF12-TNFSF13A0A0A6YY99 330 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 TEX48A0A1B0GUV7 120 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 A0A1W2PPV9 198 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 ARRDC5A6NEK1 342 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 OR52A4PA6NMU1 304 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 SNTNA6NMZ2 147 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 ZNF724A8MTY0 619 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 PRAC2D3DTV9 90 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 PDLIM1O00151 329 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 SH3BGRLO75368 114 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 SUPT7LO94864 414 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 NDUFA7O95182 113 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 ANGPTL1O95841 491 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 UMODP07911 640 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 FAM157CP0CG43 387 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 PPIAL4FP0DN26 164 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 POU2F1P14859 743 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 PAX1P15863 534 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 UCP1P25874 307 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 CD1BP29016 333 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 ARHGDIAP52565 204 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 MFAP2P55001 183 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 CARD18P57730 90 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 OR1D5P58170 312 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 KRTAP10-7P60409 375 aaPredicted RBP1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 BST1Q10588 318 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 SELENBP1Q13228 472 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 MED21Q13503 144 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 MEF2DQ14814 521 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 MS4A18Q3C1V0 323 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 ANKRD55Q3KP44 614 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 ODF3L2Q3SX64 289 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 KRT71Q3SY84 523 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 WDR38Q5JTN6 314 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 PDZK1Q5T2W1 519 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 SLC22A10Q63ZE4 541 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 ARL9Q6T311 187 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 ANKRD37Q7Z713 158 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 OR4D5Q8NGN0 318 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 OR51Q1Q8NH59 317 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 PAQR8Q8TEZ7 354 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 AGAP11Q8TF27 550 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 DYDC1Q8WWB3 177 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 ZNRF4Q8WWF5 429 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 DYRK2Q92630 601 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 EMG1Q92979 244 aaKnown RBP1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 SLC38A4Q969I6 547 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 SEC22AQ96IW7 307 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 COL21A1Q96P44 957 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 TMEM38AQ9H6F2 299 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 RPF2Q9H7B2 306 aaKnown RBP1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 CRLF2Q9HC73 371 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 VCX3AQ9NNX9 186 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 UBQLN4Q9NRR5 601 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 ZNF629Q9UEG4 869 aaPredicted RBP1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 TAC3Q9UHF0 121 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 B9D1Q9UPM9 204 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 ZNF835Q9Y2P0 537 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 DSPP15924 2871 aaKnown RBP1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 IGKV3D-15A0A087WSY6 115 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 LINC00854A0A1B0GVQ3 168 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 A6NIZ1 184 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 ZNF716A6NP11 495 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 CDC7O00311 574 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 BTN3A3O00478 584 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 FBP2O00757 339 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 PRKNO60260 465 aaPredicted RBP1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 H6PDO95479 791 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 APOA1P02647 267 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 GPIP06744 558 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 SP1P08047 785 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 STSP08842 583 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 ZNF735P0CB33 412 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 CPMP14384 443 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 TBXA2RP21731 343 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 IL12BP29460 328 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 MARCKSL1P49006 195 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 CCT3P49368 545 aaKnown RBP1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 RAB7AP51149 207 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 CRISP3P54108 245 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 CLDN15P56746 228 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 RAP1BP61224 184 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 RAP1AP62834 184 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 CYCSP99999 105 aaKnown RBP1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 TGFBR3Q03167 851 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 P2RY6Q15077 328 aa1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms