RNA–Protein interactions for RNA: ENST00000580713.1

TOP3A-210, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 474 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-210ENST00000580713 OR6N1Q8NGY5 312 aa9.03□□□□□ -0.96
TOP3A-210ENST00000580713 FNDC8Q8TC99 324 aa9.03□□□□□ -0.96
TOP3A-210ENST00000580713 MYDGFQ969H8 173 aa9.03□□□□□ -0.96
TOP3A-210ENST00000580713 TSSK2Q96PF2 358 aa9.03□□□□□ -0.96
TOP3A-210ENST00000580713 RBP7Q96R05 134 aa9.03□□□□□ -0.96
TOP3A-210ENST00000580713 DIRC2Q96SL1 478 aa9.03□□□□□ -0.96
TOP3A-210ENST00000580713 TEAD3Q99594 435 aa9.03□□□□□ -0.96
TOP3A-210ENST00000580713 FOXB1Q99853 325 aa9.03□□□□□ -0.96
TOP3A-210ENST00000580713 MRPL13Q9BYD1 178 aaKnown RBP9.03□□□□□ -0.96
TOP3A-210ENST00000580713 ULBP2Q9BZM5 246 aa9.03□□□□□ -0.96
TOP3A-210ENST00000580713 EGLN1Q9GZT9 426 aa9.03□□□□□ -0.96
TOP3A-210ENST00000580713 NUAK2Q9H093 628 aa9.03□□□□□ -0.96
TOP3A-210ENST00000580713 RERGLQ9H628 205 aa9.03□□□□□ -0.96
TOP3A-210ENST00000580713 FKBP14Q9NWM8 211 aa9.03□□□□□ -0.96
TOP3A-210ENST00000580713 PAK1IP1Q9NWT1 392 aaPredicted RBP9.03□□□□□ -0.96
TOP3A-210ENST00000580713 C1RLQ9NZP8 487 aa9.03□□□□□ -0.96
TOP3A-210ENST00000580713 SCOCQ9UIL1 159 aa9.03□□□□□ -0.96
TOP3A-210ENST00000580713 B9D1Q9UPM9 204 aa9.03□□□□□ -0.96
TOP3A-210ENST00000580713 G3V4G9 280 aa9.02□□□□□ -0.97
TOP3A-210ENST00000580713 DCTN6O00399 190 aa9.02□□□□□ -0.97
TOP3A-210ENST00000580713 SLC16A7O60669 478 aa9.02□□□□□ -0.97
TOP3A-210ENST00000580713 MRPS14O60783 128 aaKnown RBP9.02□□□□□ -0.97
TOP3A-210ENST00000580713 KHDRBS3O75525 346 aaKnown RBP9.02□□□□□ -0.97
TOP3A-210ENST00000580713 NDUFA7O95182 113 aa9.02□□□□□ -0.97
TOP3A-210ENST00000580713 MT-ND2P03891 347 aa9.02□□□□□ -0.97
TOP3A-210ENST00000580713 CDK1P06493 297 aa9.02□□□□□ -0.97
TOP3A-210ENST00000580713 CTLA4P16410 223 aa9.02□□□□□ -0.97
TOP3A-210ENST00000580713 GSTT1P30711 240 aa9.02□□□□□ -0.97
TOP3A-210ENST00000580713 ATP6V1E1P36543 226 aa9.02□□□□□ -0.97
TOP3A-210ENST00000580713 FMODQ06828 376 aa9.02□□□□□ -0.97
TOP3A-210ENST00000580713 DBPQ10586 325 aaPredicted RBP9.02□□□□□ -0.97
TOP3A-210ENST00000580713 ST3GAL4Q11206 333 aa9.02□□□□□ -0.97
TOP3A-210ENST00000580713 RAB40BQ12829 278 aa9.02□□□□□ -0.97
TOP3A-210ENST00000580713 FAM189A2Q15884 450 aa9.02□□□□□ -0.97
TOP3A-210ENST00000580713 DEFB112Q30KQ8 113 aa9.02□□□□□ -0.97
TOP3A-210ENST00000580713 FAM209AQ5JX71 171 aa9.02□□□□□ -0.97
TOP3A-210ENST00000580713 THEM4Q5T1C6 240 aa9.02□□□□□ -0.97
TOP3A-210ENST00000580713 ZNF773Q6PK81 442 aa9.02□□□□□ -0.97
TOP3A-210ENST00000580713 PRSS48Q7RTY5 328 aa9.02□□□□□ -0.97
TOP3A-210ENST00000580713 ZBTB46Q86UZ6 589 aa9.02□□□□□ -0.97
TOP3A-210ENST00000580713 OR6V1Q8N148 313 aa9.02□□□□□ -0.97
TOP3A-210ENST00000580713 KLHL36Q8N4N3 616 aa9.02□□□□□ -0.97
TOP3A-210ENST00000580713 PAQR4Q8N4S7 273 aaPredicted RBP9.02□□□□□ -0.97
TOP3A-210ENST00000580713 OR51G2Q8NGK0 314 aa9.02□□□□□ -0.97
TOP3A-210ENST00000580713 MRAPQ8TCY5 172 aa9.02□□□□□ -0.97
TOP3A-210ENST00000580713 SGCDQ92629 289 aa9.02□□□□□ -0.97
TOP3A-210ENST00000580713 TMEM54Q969K7 222 aa9.02□□□□□ -0.97
TOP3A-210ENST00000580713 LGALS12Q96DT0 336 aa9.02□□□□□ -0.97
TOP3A-210ENST00000580713 TMEM80Q96HE8 168 aa9.02□□□□□ -0.97
TOP3A-210ENST00000580713 MRPS26Q9BYN8 205 aaKnown RBP9.02□□□□□ -0.97
TOP3A-210ENST00000580713 CCDC90BQ9GZT6 254 aa9.02□□□□□ -0.97
TOP3A-210ENST00000580713 RNF121Q9H920 327 aa9.02□□□□□ -0.97
TOP3A-210ENST00000580713 MARCH7Q9H992 704 aa9.02□□□□□ -0.97
TOP3A-210ENST00000580713 MRPS18AQ9NVS2 196 aaKnown RBP9.02□□□□□ -0.97
TOP3A-210ENST00000580713 HAO2Q9NYQ3 351 aa9.02□□□□□ -0.97
TOP3A-210ENST00000580713 ZNF224Q9NZL3 707 aa9.02□□□□□ -0.97
TOP3A-210ENST00000580713 ERVK-18Q9QC07 812 aa9.02□□□□□ -0.97
TOP3A-210ENST00000580713 OR5V1Q9UGF6 321 aa9.02□□□□□ -0.97
TOP3A-210ENST00000580713 EXOGQ9Y2C4 368 aaKnown RBP9.02□□□□□ -0.97
TOP3A-210ENST00000580713 SNX5Q9Y5X3 404 aa9.02□□□□□ -0.97
TOP3A-210ENST00000580713 NPTNQ9Y639 398 aa9.02□□□□□ -0.97
TOP3A-210ENST00000580713 IGLV1-36A0A0B4J1U3 117 aa9.01□□□□□ -0.97
TOP3A-210ENST00000580713 TRAV40A0A0B4J280 105 aa9.01□□□□□ -0.97
TOP3A-210ENST00000580713 PLSCR5A0PG75 271 aa9.01□□□□□ -0.97
TOP3A-210ENST00000580713 SRRM5B3KS81 715 aa9.01□□□□□ -0.97
TOP3A-210ENST00000580713 APOL3O95236 402 aa9.01□□□□□ -0.97
TOP3A-210ENST00000580713 FADS2O95864 444 aaKnown RBP9.01□□□□□ -0.97
TOP3A-210ENST00000580713 IGHV1-46P01743 117 aa9.01□□□□□ -0.97
TOP3A-210ENST00000580713 HTR1AP08908 422 aa9.01□□□□□ -0.97
TOP3A-210ENST00000580713 MRPL3P09001 348 aaKnown RBP9.01□□□□□ -0.97
TOP3A-210ENST00000580713 SMIM18P0DKX4 95 aa9.01□□□□□ -0.97
TOP3A-210ENST00000580713 ATP6V1B1P15313 513 aa9.01□□□□□ -0.97
TOP3A-210ENST00000580713 DCKP27707 260 aa9.01□□□□□ -0.97
TOP3A-210ENST00000580713 CENPAP49450 140 aa9.01□□□□□ -0.97
TOP3A-210ENST00000580713 BLVRAP53004 296 aa9.01□□□□□ -0.97
TOP3A-210ENST00000580713 UCP2P55851 309 aa9.01□□□□□ -0.97
TOP3A-210ENST00000580713 SEC61A1P61619 476 aaKnown RBP9.01□□□□□ -0.97
TOP3A-210ENST00000580713 PDCD1Q15116 288 aa9.01□□□□□ -0.97
TOP3A-210ENST00000580713 HIST3H3Q16695 136 aa9.01□□□□□ -0.97
TOP3A-210ENST00000580713 BEAN1Q3B7T3 259 aa9.01□□□□□ -0.97
TOP3A-210ENST00000580713 ESCO2Q56NI9 601 aa9.01□□□□□ -0.97
TOP3A-210ENST00000580713 LINC01590Q5TEZ4 76 aa9.01□□□□□ -0.97
TOP3A-210ENST00000580713 C9orf139Q6ZV77 190 aa9.01□□□□□ -0.97
TOP3A-210ENST00000580713 ZNF584Q8IVC4 421 aa9.01□□□□□ -0.97
TOP3A-210ENST00000580713 SKA3Q8IX90 412 aa9.01□□□□□ -0.97
TOP3A-210ENST00000580713 SPICQ8N5J4 248 aa9.01□□□□□ -0.97
TOP3A-210ENST00000580713 OR52I1Q8NGK6 324 aa9.01□□□□□ -0.97
TOP3A-210ENST00000580713 FGFBP3Q8TAT2 258 aa9.01□□□□□ -0.97
TOP3A-210ENST00000580713 ZNRF4Q8WWF5 429 aa9.01□□□□□ -0.97
TOP3A-210ENST00000580713 MCHR2Q969V1 340 aa9.01□□□□□ -0.97
TOP3A-210ENST00000580713 NMD3Q96D46 503 aaKnown RBP9.01□□□□□ -0.97
TOP3A-210ENST00000580713 SIGLEC11Q96RL6 698 aa9.01□□□□□ -0.97
TOP3A-210ENST00000580713 CNN2Q99439 309 aaKnown RBP9.01□□□□□ -0.97
TOP3A-210ENST00000580713 BCL2L14Q9BZR8 327 aa9.01□□□□□ -0.97
TOP3A-210ENST00000580713 PATZ1Q9HBE1 687 aaKnown RBP9.01□□□□□ -0.97
TOP3A-210ENST00000580713 FGF20Q9NP95 211 aaPredicted RBP9.01□□□□□ -0.97
TOP3A-210ENST00000580713 GLTPQ9NZD2 209 aa9.01□□□□□ -0.97
TOP3A-210ENST00000580713 ASH2LQ9UBL3 628 aa9.01□□□□□ -0.97
TOP3A-210ENST00000580713 COA3Q9Y2R0 106 aaPredicted RBP9.01□□□□□ -0.97
TOP3A-210ENST00000580713 POLR3KQ9Y2Y1 108 aaPredicted RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms