RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 LCATP04180 440 aa6.9□□□□□ -1.3
COPS3-215ENST00000578317 HLA-DPB1P04440 258 aa6.9□□□□□ -1.3
COPS3-215ENST00000578317 CELA3BP08861 270 aa6.9□□□□□ -1.3
COPS3-215ENST00000578317 UBCP0CG48 685 aaKnown RBP6.9□□□□□ -1.3
COPS3-215ENST00000578317 PLA2G2AP14555 144 aa6.9□□□□□ -1.3
COPS3-215ENST00000578317 CD36P16671 472 aa6.9□□□□□ -1.3
COPS3-215ENST00000578317 IGFBP2P18065 325 aa6.9□□□□□ -1.3
COPS3-215ENST00000578317 CCL1P22362 96 aa6.9□□□□□ -1.3
COPS3-215ENST00000578317 CFL1P23528 166 aaKnown RBP6.9□□□□□ -1.3
COPS3-215ENST00000578317 WNT5AP41221 380 aa6.9□□□□□ -1.3
COPS3-215ENST00000578317 RAD52P43351 418 aa6.9□□□□□ -1.3
COPS3-215ENST00000578317 KIR3DL2P43630 455 aa6.9□□□□□ -1.3
COPS3-215ENST00000578317 UCP2P55851 309 aa6.9□□□□□ -1.3
COPS3-215ENST00000578317 NAAAQ02083 359 aa6.9□□□□□ -1.3
COPS3-215ENST00000578317 HGFACQ04756 655 aa6.9□□□□□ -1.3
COPS3-215ENST00000578317 SRSF1Q07955 248 aaKnown RBP eCLIP6.9□□□□□ -1.3
COPS3-215ENST00000578317 MFGE8Q08431 387 aaPredicted RBP6.9□□□□□ -1.3
COPS3-215ENST00000578317 TSTQ16762 297 aaKnown RBP6.9□□□□□ -1.3
COPS3-215ENST00000578317 WDR38Q5JTN6 314 aa6.9□□□□□ -1.3
COPS3-215ENST00000578317 TOR2AQ5JU69 321 aa6.9□□□□□ -1.3
COPS3-215ENST00000578317 TMEM108Q6UXF1 575 aa6.9□□□□□ -1.3
COPS3-215ENST00000578317 KRT74Q7RTS7 529 aa6.9□□□□□ -1.3
COPS3-215ENST00000578317 GPR141Q7Z602 305 aa6.9□□□□□ -1.3
COPS3-215ENST00000578317 ANKRD13BQ86YJ7 626 aa6.9□□□□□ -1.3
COPS3-215ENST00000578317 OR5L1Q8NGL2 311 aa6.9□□□□□ -1.3
COPS3-215ENST00000578317 OR5AK2Q8NH90 309 aa6.9□□□□□ -1.3
COPS3-215ENST00000578317 PHYHIPQ92561 330 aa6.9□□□□□ -1.3
COPS3-215ENST00000578317 SGK3Q96BR1 496 aa6.9□□□□□ -1.3
COPS3-215ENST00000578317 RADILQ96JH8 1075 aa6.9□□□□□ -1.3
COPS3-215ENST00000578317 C1QTNF6Q9BXI9 259 aa6.9□□□□□ -1.3
COPS3-215ENST00000578317 OR10A2Q9H208 303 aa6.9□□□□□ -1.3
COPS3-215ENST00000578317 NPAP1Q9NZP6 1156 aa6.9□□□□□ -1.3
COPS3-215ENST00000578317 ZNF319Q9P2F9 582 aa6.9□□□□□ -1.3
COPS3-215ENST00000578317 SLC22A13Q9Y226 551 aa6.9□□□□□ -1.3
COPS3-215ENST00000578317 NCOA6Q14686 2063 aaPredicted RBP6.9□□□□□ -1.3
COPS3-215ENST00000578317 HELZ2Q9BYK8 2649 aaKnown RBP6.9□□□□□ -1.3
COPS3-215ENST00000578317 LRRK2Q5S007 2527 aa6.9□□□□□ -1.3
COPS3-215ENST00000578317 GCN1Q92616 2671 aaKnown RBP6.9□□□□□ -1.3
COPS3-215ENST00000578317 ANKHD1Q8IWZ3 2542 aaKnown RBP6.9□□□□□ -1.31
COPS3-215ENST00000578317 CACNA1CQ13936 2221 aa6.9□□□□□ -1.31
COPS3-215ENST00000578317 IGHV2OR16-5A0A0B4J2B6 119 aa6.9□□□□□ -1.31
COPS3-215ENST00000578317 A0A1B0GTI1 187 aa6.9□□□□□ -1.31
COPS3-215ENST00000578317 DPRXA6NFQ7 191 aa6.9□□□□□ -1.31
COPS3-215ENST00000578317 DHRS7CA6NNS2 312 aa6.9□□□□□ -1.31
COPS3-215ENST00000578317 SERPINA3P01011 423 aa6.9□□□□□ -1.31
COPS3-215ENST00000578317 ANXA2P07355 339 aaKnown RBP6.9□□□□□ -1.31
COPS3-215ENST00000578317 CCL2P13500 99 aa6.9□□□□□ -1.31
COPS3-215ENST00000578317 ZNF12P17014 697 aa6.9□□□□□ -1.31
COPS3-215ENST00000578317 CCNOP22674 350 aa6.9□□□□□ -1.31
COPS3-215ENST00000578317 FGF9P31371 208 aaPredicted RBP6.9□□□□□ -1.31
COPS3-215ENST00000578317 TGFBR2P37173 567 aa6.9□□□□□ -1.31
COPS3-215ENST00000578317 CRYBB2P43320 205 aa6.9□□□□□ -1.31
COPS3-215ENST00000578317 SLC6A9P48067 706 aa6.9□□□□□ -1.31
COPS3-215ENST00000578317 ZNF83P51522 516 aa6.9□□□□□ -1.31
COPS3-215ENST00000578317 RPS11P62280 158 aaKnown RBP eCLIP6.9□□□□□ -1.31
COPS3-215ENST00000578317 SLC3A1Q07837 685 aa6.9□□□□□ -1.31
COPS3-215ENST00000578317 TIMM50Q3ZCQ8 353 aa6.9□□□□□ -1.31
COPS3-215ENST00000578317 CT83Q5H943 113 aa6.9□□□□□ -1.31
COPS3-215ENST00000578317 BCL2L15Q5TBC7 163 aa6.9□□□□□ -1.31
COPS3-215ENST00000578317 UNQ9370/PRO34162Q6UXP9 181 aa6.9□□□□□ -1.31
COPS3-215ENST00000578317 FAM57BQ71RH2 274 aa6.9□□□□□ -1.31
COPS3-215ENST00000578317 MYPOPQ86VE0 399 aaPredicted RBP6.9□□□□□ -1.31
COPS3-215ENST00000578317 PAQR4Q8N4S7 273 aaPredicted RBP6.9□□□□□ -1.31
COPS3-215ENST00000578317 ZNF676Q8N7Q3 588 aa6.9□□□□□ -1.31
COPS3-215ENST00000578317 OR8B12Q8NGG6 310 aa6.9□□□□□ -1.31
COPS3-215ENST00000578317 ABHD4Q8TB40 342 aa6.9□□□□□ -1.31
COPS3-215ENST00000578317 GPR148Q8TDV2 347 aa6.9□□□□□ -1.31
COPS3-215ENST00000578317 THRSPQ92748 146 aa6.9□□□□□ -1.31
COPS3-215ENST00000578317 C10orf35Q96D05 121 aa6.9□□□□□ -1.31
COPS3-215ENST00000578317 PGAM5Q96HS1 289 aa6.9□□□□□ -1.31
COPS3-215ENST00000578317 PDCD1LG2Q9BQ51 273 aa6.9□□□□□ -1.31
COPS3-215ENST00000578317 BCL7BQ9BQE9 202 aa6.9□□□□□ -1.31
COPS3-215ENST00000578317 BCL2L14Q9BZR8 327 aa6.9□□□□□ -1.31
COPS3-215ENST00000578317 COMMD4Q9H0A8 199 aa6.9□□□□□ -1.31
COPS3-215ENST00000578317 OPA3Q9H6K4 179 aa6.9□□□□□ -1.31
COPS3-215ENST00000578317 ESRP2Q9H6T0 727 aaKnown RBP6.9□□□□□ -1.31
COPS3-215ENST00000578317 CDH20Q9HBT6 801 aa6.9□□□□□ -1.31
COPS3-215ENST00000578317 HHLA2Q9UM44 414 aa6.9□□□□□ -1.31
COPS3-215ENST00000578317 DIDO1Q9BTC0 2240 aaKnown RBP6.89□□□□□ -1.31
COPS3-215ENST00000578317 TRBV5-5A0A0J9YX44 114 aa6.89□□□□□ -1.31
COPS3-215ENST00000578317 SMIM31A0A1B0GVY4 71 aa6.89□□□□□ -1.31
COPS3-215ENST00000578317 TRDV1A0A1B0GX56 115 aa6.89□□□□□ -1.31
COPS3-215ENST00000578317 NOTOA8MTQ0 251 aa6.89□□□□□ -1.31
COPS3-215ENST00000578317 H3BSA7 217 aa6.89□□□□□ -1.31
COPS3-215ENST00000578317 ZNF701M0R085 212 aaPredicted RBP6.89□□□□□ -1.31
COPS3-215ENST00000578317 M0R1B8 84 aa6.89□□□□□ -1.31
COPS3-215ENST00000578317 CASKO14936 926 aa6.89□□□□□ -1.31
COPS3-215ENST00000578317 XRCC2O43543 280 aa6.89□□□□□ -1.31
COPS3-215ENST00000578317 GATBO75879 557 aaKnown RBP6.89□□□□□ -1.31
COPS3-215ENST00000578317 NGFP01138 241 aa6.89□□□□□ -1.31
COPS3-215ENST00000578317 RAF1P04049 648 aa6.89□□□□□ -1.31
COPS3-215ENST00000578317 CLEC2LP0C7M8 214 aa6.89□□□□□ -1.31
COPS3-215ENST00000578317 SLC2A1P11166 492 aa6.89□□□□□ -1.31
COPS3-215ENST00000578317 ACHEP22303 614 aa6.89□□□□□ -1.31
COPS3-215ENST00000578317 NR4A1P22736 598 aa6.89□□□□□ -1.31
COPS3-215ENST00000578317 GLRXP35754 106 aa6.89□□□□□ -1.31
COPS3-215ENST00000578317 DDOSTP39656 456 aa6.89□□□□□ -1.31
COPS3-215ENST00000578317 KIR2DL3P43628 341 aa6.89□□□□□ -1.31
COPS3-215ENST00000578317 TMBIM6P55061 237 aa6.89□□□□□ -1.31
COPS3-215ENST00000578317 NKX6-1P78426 367 aaPredicted RBP6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 108.3 ms