RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 ZNF774Q6NX45 483 aa12.31□□□□□ -0.44
VPS33B-208ENST00000574755 GALNT16Q8N428 558 aa12.31□□□□□ -0.44
VPS33B-208ENST00000574755 PNLDC1Q8NA58 520 aaKnown RBP12.31□□□□□ -0.44
VPS33B-208ENST00000574755 NPDC1Q9NQX5 325 aaPredicted RBP12.31□□□□□ -0.44
VPS33B-208ENST00000574755 DLL4Q9NR61 685 aa12.31□□□□□ -0.44
VPS33B-208ENST00000574755 V9GYS6 101 aa12.31□□□□□ -0.44
VPS33B-208ENST00000574755 SNRPGP15A8MWD9 76 aa12.3□□□□□ -0.44
VPS33B-208ENST00000574755 SYNGR3O43761 229 aa12.3□□□□□ -0.44
VPS33B-208ENST00000574755 MPIG6BO95866 241 aa12.3□□□□□ -0.44
VPS33B-208ENST00000574755 AMY2AP04746 511 aa12.3□□□□□ -0.44
VPS33B-208ENST00000574755 PATE4P0C8F1 98 aa12.3□□□□□ -0.44
VPS33B-208ENST00000574755 GNB3P16520 340 aa12.3□□□□□ -0.44
VPS33B-208ENST00000574755 ZNF32P17041 273 aa12.3□□□□□ -0.44
VPS33B-208ENST00000574755 THBS4P35443 961 aa12.3□□□□□ -0.44
VPS33B-208ENST00000574755 RSPO4Q2I0M5 234 aaPredicted RBP12.3□□□□□ -0.44
VPS33B-208ENST00000574755 SFRP5Q5T4F7 317 aa12.3□□□□□ -0.44
VPS33B-208ENST00000574755 DRAM2Q6UX65 266 aa12.3□□□□□ -0.44
VPS33B-208ENST00000574755 OR2W3Q7Z3T1 314 aa12.3□□□□□ -0.44
VPS33B-208ENST00000574755 GALNTL5Q7Z4T8 443 aa12.3□□□□□ -0.44
VPS33B-208ENST00000574755 TRAPPC6BQ86SZ2 158 aa12.3□□□□□ -0.44
VPS33B-208ENST00000574755 FJX1Q86VR8 437 aa12.3□□□□□ -0.44
VPS33B-208ENST00000574755 C9orf62Q8N4C0 152 aa12.3□□□□□ -0.44
VPS33B-208ENST00000574755 TMEM104Q8NE00 496 aa12.3□□□□□ -0.44
VPS33B-208ENST00000574755 OR52H1Q8NGJ2 320 aa12.3□□□□□ -0.44
VPS33B-208ENST00000574755 OR52B4Q8NGK2 314 aa12.3□□□□□ -0.44
VPS33B-208ENST00000574755 OR10R2Q8NGX6 335 aa12.3□□□□□ -0.44
VPS33B-208ENST00000574755 KCNG3Q8TAE7 436 aa12.3□□□□□ -0.44
VPS33B-208ENST00000574755 NICN1Q9BSH3 213 aa12.3□□□□□ -0.44
VPS33B-208ENST00000574755 TINAGL1Q9GZM7 467 aaPredicted RBP12.3□□□□□ -0.44
VPS33B-208ENST00000574755 OR10A2Q9H208 303 aa12.3□□□□□ -0.44
VPS33B-208ENST00000574755 SLC6A15Q9H2J7 730 aa12.3□□□□□ -0.44
VPS33B-208ENST00000574755 EXO5Q9H790 373 aa12.3□□□□□ -0.44
VPS33B-208ENST00000574755 MGAT4CQ9UBM8 478 aa12.3□□□□□ -0.44
VPS33B-208ENST00000574755 PIGLQ9Y2B2 252 aa12.3□□□□□ -0.44
VPS33B-208ENST00000574755 NOSIPQ9Y314 301 aaKnown RBP12.3□□□□□ -0.44
VPS33B-208ENST00000574755 IGHV3-9P01782 118 aa12.3□□□□□ -0.44
VPS33B-208ENST00000574755 CRYGSP22914 178 aa12.3□□□□□ -0.44
VPS33B-208ENST00000574755 KISS1Q15726 138 aa12.3□□□□□ -0.44
VPS33B-208ENST00000574755 ATP1A1-AS1Q5TC04 95 aa12.3□□□□□ -0.44
VPS33B-208ENST00000574755 PLXDC2Q6UX71 529 aa12.3□□□□□ -0.44
VPS33B-208ENST00000574755 SEZ6L2Q6UXD5 910 aa12.3□□□□□ -0.44
VPS33B-208ENST00000574755 IDO2Q6ZQW0 420 aa12.3□□□□□ -0.44
VPS33B-208ENST00000574755 DTX1Q86Y01 620 aa12.3□□□□□ -0.44
VPS33B-208ENST00000574755 OR4S1Q8NGB4 309 aa12.3□□□□□ -0.44
VPS33B-208ENST00000574755 OR5D18Q8NGL1 313 aa12.3□□□□□ -0.44
VPS33B-208ENST00000574755 OR1F12Q8NHA8 337 aa12.3□□□□□ -0.44
VPS33B-208ENST00000574755 NUDCD2Q8WVJ2 157 aa12.3□□□□□ -0.44
VPS33B-208ENST00000574755 PP6455Q8WZ26 134 aa12.3□□□□□ -0.44
VPS33B-208ENST00000574755 C1orf147Q96MC9 270 aaPredicted RBP12.3□□□□□ -0.44
VPS33B-208ENST00000574755 TMEM59Q9BXS4 323 aa12.3□□□□□ -0.44
VPS33B-208ENST00000574755 SELENOIQ9C0D9 397 aa12.3□□□□□ -0.44
VPS33B-208ENST00000574755 LPAR5Q9H1C0 372 aa12.3□□□□□ -0.44
VPS33B-208ENST00000574755 GPR35Q9HC97 309 aa12.3□□□□□ -0.44
VPS33B-208ENST00000574755 PTTG3PQ9NZH4 202 aa12.3□□□□□ -0.44
VPS33B-208ENST00000574755 ZNF107Q9UII5 783 aaPredicted RBP12.3□□□□□ -0.44
VPS33B-208ENST00000574755 SCP2D1Q9UJQ7 156 aa12.3□□□□□ -0.44
VPS33B-208ENST00000574755 NPTNQ9Y639 398 aa12.3□□□□□ -0.44
VPS33B-208ENST00000574755 A6NL46 340 aa12.29□□□□□ -0.44
VPS33B-208ENST00000574755 CDC14BO60729 498 aa12.29□□□□□ -0.44
VPS33B-208ENST00000574755 MRPL33O75394 65 aaKnown RBP12.29□□□□□ -0.44
VPS33B-208ENST00000574755 VSIG10L2P0DP72 767 aa12.29□□□□□ -0.44
VPS33B-208ENST00000574755 GSK3AP49840 483 aa12.29□□□□□ -0.44
VPS33B-208ENST00000574755 CLDN18P56856 261 aa12.29□□□□□ -0.44
VPS33B-208ENST00000574755 SLC16A14Q7RTX9 510 aa12.29□□□□□ -0.44
VPS33B-208ENST00000574755 TMEM251Q8N6I4 163 aa12.29□□□□□ -0.44
VPS33B-208ENST00000574755 OR11H4Q8NGC9 324 aa12.29□□□□□ -0.44
VPS33B-208ENST00000574755 OR2T35Q8NGX2 323 aa12.29□□□□□ -0.44
VPS33B-208ENST00000574755 AKR7LQ8NHP1 331 aa12.29□□□□□ -0.44
VPS33B-208ENST00000574755 SSC4DQ8WTU2 575 aa12.29□□□□□ -0.44
VPS33B-208ENST00000574755 CHIAQ9BZP6 476 aa12.29□□□□□ -0.44
VPS33B-208ENST00000574755 CHST5Q9GZS9 411 aa12.29□□□□□ -0.44
VPS33B-208ENST00000574755 BANF2Q9H503 90 aa12.29□□□□□ -0.44
VPS33B-208ENST00000574755 KLF13Q9Y2Y9 288 aaPredicted RBP12.29□□□□□ -0.44
VPS33B-208ENST00000574755 MYO7BQ6PIF6 2116 aa12.29□□□□□ -0.44
VPS33B-208ENST00000574755 A0A1W2PP11 408 aa12.29□□□□□ -0.44
VPS33B-208ENST00000574755 UBE2QL1A1L167 161 aa12.29□□□□□ -0.44
VPS33B-208ENST00000574755 ZNF780AO75290 641 aaPredicted RBP12.29□□□□□ -0.44
VPS33B-208ENST00000574755 CRTAPO75718 401 aaPredicted RBP12.29□□□□□ -0.44
VPS33B-208ENST00000574755 SP1P08047 785 aa12.29□□□□□ -0.44
VPS33B-208ENST00000574755 CHRM2P08172 466 aa12.29□□□□□ -0.44
VPS33B-208ENST00000574755 MELTFP08582 738 aa12.29□□□□□ -0.44
VPS33B-208ENST00000574755 DNASE1P24855 282 aa12.29□□□□□ -0.44
VPS33B-208ENST00000574755 HTR5AP47898 357 aa12.29□□□□□ -0.44
VPS33B-208ENST00000574755 TGIF1Q15583 401 aa12.29□□□□□ -0.44
VPS33B-208ENST00000574755 UBE2V2Q15819 145 aa12.29□□□□□ -0.44
VPS33B-208ENST00000574755 CSRP2Q16527 193 aa12.29□□□□□ -0.44
VPS33B-208ENST00000574755 SLC22A6Q4U2R8 563 aa12.29□□□□□ -0.44
VPS33B-208ENST00000574755 NLRC3Q7RTR2 1065 aa12.29□□□□□ -0.44
VPS33B-208ENST00000574755 SLC36A1Q7Z2H8 476 aa12.29□□□□□ -0.44
VPS33B-208ENST00000574755 BPIFB2Q8N4F0 458 aa12.29□□□□□ -0.44
VPS33B-208ENST00000574755 GVQW1Q8N7I0 195 aa12.29□□□□□ -0.44
VPS33B-208ENST00000574755 OR2AE1Q8NHA4 323 aa12.29□□□□□ -0.44
VPS33B-208ENST00000574755 GRPEL2Q8TAA5 225 aa12.29□□□□□ -0.44
VPS33B-208ENST00000574755 TMEM45BQ96B21 275 aa12.29□□□□□ -0.44
VPS33B-208ENST00000574755 SGK3Q96BR1 496 aa12.29□□□□□ -0.44
VPS33B-208ENST00000574755 NUDT16L1Q9BRJ7 211 aaKnown RBP12.29□□□□□ -0.44
VPS33B-208ENST00000574755 UPB1Q9UBR1 384 aa12.29□□□□□ -0.44
VPS33B-208ENST00000574755 TOXO94900 526 aa12.28□□□□□ -0.44
VPS33B-208ENST00000574755 CD74P04233 296 aa12.28□□□□□ -0.44
VPS33B-208ENST00000574755 CSN2P05814 226 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms