RNA–Protein interactions for RNA: ENST00000572174.5

RPAIN-211, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-211ENST00000572174 TTC23Q5W5X9 447 aa11.8□□□□□ -0.52
RPAIN-211ENST00000572174 BCDIN3DQ7Z5W3 292 aaKnown RBP11.8□□□□□ -0.52
RPAIN-211ENST00000572174 KCTD20Q7Z5Y7 419 aa11.8□□□□□ -0.52
RPAIN-211ENST00000572174 EGFL6Q8IUX8 553 aa11.8□□□□□ -0.52
RPAIN-211ENST00000572174 TEX29Q8N6K0 151 aa11.8□□□□□ -0.52
RPAIN-211ENST00000572174 OR10H4Q8NGA5 316 aa11.8□□□□□ -0.52
RPAIN-211ENST00000572174 OR8B12Q8NGG6 310 aa11.8□□□□□ -0.52
RPAIN-211ENST00000572174 CLDND2Q8NHS1 167 aa11.8□□□□□ -0.52
RPAIN-211ENST00000572174 Q8TCH9 128 aa11.8□□□□□ -0.52
RPAIN-211ENST00000572174 SGK3Q96BR1 496 aa11.8□□□□□ -0.52
RPAIN-211ENST00000572174 GCM1Q9NP62 436 aa11.8□□□□□ -0.52
RPAIN-211ENST00000572174 TRIM36Q9NQ86 728 aa11.8□□□□□ -0.52
RPAIN-211ENST00000572174 FAM118AQ9NWS6 357 aa11.8□□□□□ -0.52
RPAIN-211ENST00000572174 FAM206AQ9NX38 181 aa11.8□□□□□ -0.52
RPAIN-211ENST00000572174 NUFIP1Q9UHK0 495 aaKnown RBP11.8□□□□□ -0.52
RPAIN-211ENST00000572174 CDC42EP3Q9UKI2 254 aa11.8□□□□□ -0.52
RPAIN-211ENST00000572174 PCDHB10Q9UN67 800 aa11.8□□□□□ -0.52
RPAIN-211ENST00000572174 MPC1Q9Y5U8 109 aa11.8□□□□□ -0.52
RPAIN-211ENST00000572174 SNX5Q9Y5X3 404 aa11.8□□□□□ -0.52
RPAIN-211ENST00000572174 R4GMQ9 66 aa11.8□□□□□ -0.52
RPAIN-211ENST00000572174 SONP18583 2426 aaKnown RBP11.8□□□□□ -0.52
RPAIN-211ENST00000572174 IRGMA1A4Y4 181 aa11.79□□□□□ -0.52
RPAIN-211ENST00000572174 LRP5LA4QPB2 252 aa11.79□□□□□ -0.52
RPAIN-211ENST00000572174 E9PQ18 207 aa11.79□□□□□ -0.52
RPAIN-211ENST00000572174 F5H5P2 479 aa11.79□□□□□ -0.52
RPAIN-211ENST00000572174 MLNRO43193 412 aa11.79□□□□□ -0.52
RPAIN-211ENST00000572174 RPSAP08865 295 aaKnown RBP11.79□□□□□ -0.52
RPAIN-211ENST00000572174 ZNF16P17020 682 aaPredicted RBP11.79□□□□□ -0.52
RPAIN-211ENST00000572174 CA6P23280 308 aa11.79□□□□□ -0.52
RPAIN-211ENST00000572174 GSK3AP49840 483 aa11.79□□□□□ -0.52
RPAIN-211ENST00000572174 BTG1P62324 171 aa11.79□□□□□ -0.52
RPAIN-211ENST00000572174 ACTA2P62736 377 aa11.79□□□□□ -0.52
RPAIN-211ENST00000572174 ACTG2P63267 376 aa11.79□□□□□ -0.52
RPAIN-211ENST00000572174 MVKQ03426 396 aa11.79□□□□□ -0.52
RPAIN-211ENST00000572174 IL18R1Q13478 541 aa11.79□□□□□ -0.52
RPAIN-211ENST00000572174 GLCCI1Q86VQ1 547 aa11.79□□□□□ -0.52
RPAIN-211ENST00000572174 YIPF7Q8N8F6 280 aa11.79□□□□□ -0.52
RPAIN-211ENST00000572174 CCDC54Q8NEL0 328 aa11.79□□□□□ -0.52
RPAIN-211ENST00000572174 OR51F2Q8NH61 342 aa11.79□□□□□ -0.52
RPAIN-211ENST00000572174 HAVCR2Q8TDQ0 301 aa11.79□□□□□ -0.52
RPAIN-211ENST00000572174 C1orf159Q96HA4 380 aa11.79□□□□□ -0.52
RPAIN-211ENST00000572174 MBOAT4Q96T53 435 aa11.79□□□□□ -0.52
RPAIN-211ENST00000572174 SLC29A1Q99808 456 aa11.79□□□□□ -0.52
RPAIN-211ENST00000572174 PAPOLGQ9BWT3 736 aaKnown RBP11.79□□□□□ -0.52
RPAIN-211ENST00000572174 INPP5EQ9NRR6 644 aa11.79□□□□□ -0.52
RPAIN-211ENST00000572174 GTF2A1LQ9UNN4 478 aa11.79□□□□□ -0.52
RPAIN-211ENST00000572174 COPS3Q9UNS2 423 aa11.79□□□□□ -0.52
RPAIN-211ENST00000572174 METTL15A6NJ78 407 aa11.78□□□□□ -0.52
RPAIN-211ENST00000572174 DHRS7CA6NNS2 312 aa11.78□□□□□ -0.52
RPAIN-211ENST00000572174 TMEM178BH3BS89 294 aa11.78□□□□□ -0.52
RPAIN-211ENST00000572174 LMX1BO60663 402 aa11.78□□□□□ -0.52
RPAIN-211ENST00000572174 PTBP3O95758 552 aaKnown RBP11.78□□□□□ -0.52
RPAIN-211ENST00000572174 FADS2O95864 444 aaKnown RBP11.78□□□□□ -0.52
RPAIN-211ENST00000572174 HLA-DPB1P04440 258 aa11.78□□□□□ -0.52
RPAIN-211ENST00000572174 HCCSP53701 268 aa11.78□□□□□ -0.52
RPAIN-211ENST00000572174 DVL1P1P54792 670 aaPredicted RBP11.78□□□□□ -0.52
RPAIN-211ENST00000572174 Q71RC1 249 aaPredicted RBP11.78□□□□□ -0.52
RPAIN-211ENST00000572174 THAP5Q7Z6K1 395 aa11.78□□□□□ -0.52
RPAIN-211ENST00000572174 MSI2Q96DH6 328 aaKnown RBP11.78□□□□□ -0.52
RPAIN-211ENST00000572174 RNFT2Q96EX2 444 aa11.78□□□□□ -0.52
RPAIN-211ENST00000572174 HIST1H2AAQ96QV6 131 aa11.78□□□□□ -0.52
RPAIN-211ENST00000572174 MICU1Q9BPX6 476 aa11.78□□□□□ -0.52
RPAIN-211ENST00000572174 RTL8AQ9BWD3 113 aa11.78□□□□□ -0.52
RPAIN-211ENST00000572174 PBOV1Q9GZY1 135 aa11.78□□□□□ -0.52
RPAIN-211ENST00000572174 NARFLQ9H6Q4 476 aa11.78□□□□□ -0.52
RPAIN-211ENST00000572174 ZNF665Q9H7R5 613 aa11.78□□□□□ -0.52
RPAIN-211ENST00000572174 RPL36Q9Y3U8 105 aaKnown RBP11.78□□□□□ -0.52
RPAIN-211ENST00000572174 SETD2Q9BYW2 2564 aaPredicted RBP11.77□□□□□ -0.52
RPAIN-211ENST00000572174 TRAV20A0A0B4J274 112 aa11.77□□□□□ -0.53
RPAIN-211ENST00000572174 ZNF816-ZNF321PA0A0X1KG74 233 aa11.77□□□□□ -0.53
RPAIN-211ENST00000572174 A0A1W2PQL4 384 aaPredicted RBP11.77□□□□□ -0.53
RPAIN-211ENST00000572174 DAPL1A0PJW8 107 aa11.77□□□□□ -0.53
RPAIN-211ENST00000572174 TMEM210A6NLX4 147 aa11.77□□□□□ -0.53
RPAIN-211ENST00000572174 PSMD9O00233 223 aa11.77□□□□□ -0.53
RPAIN-211ENST00000572174 CASQ2O14958 399 aaPredicted RBP11.77□□□□□ -0.53
RPAIN-211ENST00000572174 ENTPD6O75354 484 aa11.77□□□□□ -0.53
RPAIN-211ENST00000572174 CST4P01036 141 aa11.77□□□□□ -0.53
RPAIN-211ENST00000572174 TGFAP01135 160 aa11.77□□□□□ -0.53
RPAIN-211ENST00000572174 IGHV2-70P01814 119 aa11.77□□□□□ -0.53
RPAIN-211ENST00000572174 MSMBP08118 114 aa11.77□□□□□ -0.53
RPAIN-211ENST00000572174 ZNF12P17014 697 aa11.77□□□□□ -0.53
RPAIN-211ENST00000572174 PEX2P28328 305 aa11.77□□□□□ -0.53
RPAIN-211ENST00000572174 RIPPLY1Q0D2K3 151 aa11.77□□□□□ -0.53
RPAIN-211ENST00000572174 RAB40BQ12829 278 aa11.77□□□□□ -0.53
RPAIN-211ENST00000572174 MRPL28Q13084 256 aaKnown RBP11.77□□□□□ -0.53
RPAIN-211ENST00000572174 CHRFAM7AQ494W8 412 aa11.77□□□□□ -0.53
RPAIN-211ENST00000572174 AVPI1Q5T686 147 aa11.77□□□□□ -0.53
RPAIN-211ENST00000572174 LPCAT4Q643R3 524 aa11.77□□□□□ -0.53
RPAIN-211ENST00000572174 MOGAT3Q86VF5 341 aa11.77□□□□□ -0.53
RPAIN-211ENST00000572174 ENTHD1Q8IYW4 607 aa11.77□□□□□ -0.53
RPAIN-211ENST00000572174 GALNT4Q8N4A0 578 aa11.77□□□□□ -0.53
RPAIN-211ENST00000572174 DHRSXQ8N5I4 330 aa11.77□□□□□ -0.53
RPAIN-211ENST00000572174 ACBD7Q8N6N7 88 aa11.77□□□□□ -0.53
RPAIN-211ENST00000572174 SEMA6DQ8NFY4 1073 aa11.77□□□□□ -0.53
RPAIN-211ENST00000572174 RHOXF1Q8NHV9 184 aa11.77□□□□□ -0.53
RPAIN-211ENST00000572174 TBX5Q99593 518 aa11.77□□□□□ -0.53
RPAIN-211ENST00000572174 SHARPINQ9H0F6 387 aa11.77□□□□□ -0.53
RPAIN-211ENST00000572174 VCX3BQ9H321 246 aa11.77□□□□□ -0.53
RPAIN-211ENST00000572174 CACNG2Q9Y698 323 aa11.77□□□□□ -0.53
RPAIN-211ENST00000572174 HSPE1-MOB4S4R3N1 261 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms