RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 HSD17B12Q53GQ0 312 aa5.67□□□□□ -1.5
CTDNEP1-204ENST00000570484 GPR107Q5VW38 600 aa5.67□□□□□ -1.5
CTDNEP1-204ENST00000570484 COLCA1Q6ZS62 124 aa5.67□□□□□ -1.5
CTDNEP1-204ENST00000570484 PRSS45Q7RTY3 260 aa5.67□□□□□ -1.5
CTDNEP1-204ENST00000570484 NAA40Q86UY6 237 aa5.67□□□□□ -1.5
CTDNEP1-204ENST00000570484 BHLHE23Q8NDY6 225 aa5.67□□□□□ -1.5
CTDNEP1-204ENST00000570484 CSNK2A3Q8NEV1 391 aa5.67□□□□□ -1.5
CTDNEP1-204ENST00000570484 OR56B2PQ8NGI1 322 aa5.67□□□□□ -1.5
CTDNEP1-204ENST00000570484 OR13C5Q8NGS8 318 aa5.67□□□□□ -1.5
CTDNEP1-204ENST00000570484 SYNPRQ8TBG9 265 aa5.67□□□□□ -1.5
CTDNEP1-204ENST00000570484 SLC25A40Q8TBP6 338 aa5.67□□□□□ -1.5
CTDNEP1-204ENST00000570484 RPS4Y2Q8TD47 263 aa5.67□□□□□ -1.5
CTDNEP1-204ENST00000570484 RAB2BQ8WUD1 216 aa5.67□□□□□ -1.5
CTDNEP1-204ENST00000570484 ITFG2Q969R8 447 aa5.67□□□□□ -1.5
CTDNEP1-204ENST00000570484 CPNE2Q96FN4 548 aaPredicted RBP5.67□□□□□ -1.5
CTDNEP1-204ENST00000570484 OR14A2Q96R54 314 aa5.67□□□□□ -1.5
CTDNEP1-204ENST00000570484 CHCHD6Q9BRQ6 235 aa5.67□□□□□ -1.5
CTDNEP1-204ENST00000570484 ZNF442Q9H7R0 627 aa5.67□□□□□ -1.5
CTDNEP1-204ENST00000570484 TCF7L1Q9HCS4 588 aa5.67□□□□□ -1.5
CTDNEP1-204ENST00000570484 DYNLRB1Q9NP97 96 aa5.67□□□□□ -1.5
CTDNEP1-204ENST00000570484 BATF3Q9NR55 127 aa5.67□□□□□ -1.5
CTDNEP1-204ENST00000570484 CA10Q9NS85 328 aa5.67□□□□□ -1.5
CTDNEP1-204ENST00000570484 FAIMQ9NVQ4 179 aa5.67□□□□□ -1.5
CTDNEP1-204ENST00000570484 KCNN3Q9UGI6 736 aa5.67□□□□□ -1.5
CTDNEP1-204ENST00000570484 GPR160Q9UJ42 338 aa5.67□□□□□ -1.5
CTDNEP1-204ENST00000570484 PIGLQ9Y2B2 252 aa5.67□□□□□ -1.5
CTDNEP1-204ENST00000570484 SIRT4Q9Y6E7 314 aaPredicted RBP5.67□□□□□ -1.5
CTDNEP1-204ENST00000570484 DNAJC13O75165 2243 aa5.66□□□□□ -1.5
CTDNEP1-204ENST00000570484 KALRNO60229 2985 aa5.66□□□□□ -1.5
CTDNEP1-204ENST00000570484 ZFYVE26Q68DK2 2539 aa5.66□□□□□ -1.5
CTDNEP1-204ENST00000570484 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.66□□□□□ -1.5
CTDNEP1-204ENST00000570484 ZNF816-ZNF321PA0A0X1KG74 233 aa5.66□□□□□ -1.5
CTDNEP1-204ENST00000570484 hCG_38984A0A1B0GV85 526 aa5.66□□□□□ -1.5
CTDNEP1-204ENST00000570484 SMIM31A0A1B0GVY4 71 aa5.66□□□□□ -1.5
CTDNEP1-204ENST00000570484 LOC390937A0A1W2PQ73 354 aa5.66□□□□□ -1.5
CTDNEP1-204ENST00000570484 DPRXA6NFQ7 191 aa5.66□□□□□ -1.5
CTDNEP1-204ENST00000570484 ANKRD61A6NGH8 418 aa5.66□□□□□ -1.5
CTDNEP1-204ENST00000570484 ANXA2P2A6NMY6 339 aa5.66□□□□□ -1.5
CTDNEP1-204ENST00000570484 A6NNC1 897 aa5.66□□□□□ -1.5
CTDNEP1-204ENST00000570484 MAGEB3O15480 346 aa5.66□□□□□ -1.5
CTDNEP1-204ENST00000570484 GABARAPO95166 117 aa5.66□□□□□ -1.5
CTDNEP1-204ENST00000570484 ERCC1P07992 297 aaPredicted RBP5.66□□□□□ -1.5
CTDNEP1-204ENST00000570484 FAHP16930 419 aa5.66□□□□□ -1.5
CTDNEP1-204ENST00000570484 IGFBP2P18065 325 aa5.66□□□□□ -1.5
CTDNEP1-204ENST00000570484 CCL1P22362 96 aa5.66□□□□□ -1.5
CTDNEP1-204ENST00000570484 GALP22466 123 aa5.66□□□□□ -1.5
CTDNEP1-204ENST00000570484 CALRP27797 417 aaKnown RBP5.66□□□□□ -1.5
CTDNEP1-204ENST00000570484 THBS4P35443 961 aa5.66□□□□□ -1.5
CTDNEP1-204ENST00000570484 GLRXP35754 106 aa5.66□□□□□ -1.5
CTDNEP1-204ENST00000570484 DDOSTP39656 456 aa5.66□□□□□ -1.5
CTDNEP1-204ENST00000570484 FABP6P51161 128 aa5.66□□□□□ -1.5
CTDNEP1-204ENST00000570484 SNRPD2P62316 118 aaKnown RBP5.66□□□□□ -1.5
CTDNEP1-204ENST00000570484 ZNF92Q03936 586 aa5.66□□□□□ -1.5
CTDNEP1-204ENST00000570484 DOC2BQ14184 412 aa5.66□□□□□ -1.5
CTDNEP1-204ENST00000570484 OR8B8Q15620 311 aa5.66□□□□□ -1.5
CTDNEP1-204ENST00000570484 RSPO1Q2MKA7 263 aaPredicted RBP5.66□□□□□ -1.5
CTDNEP1-204ENST00000570484 ACSM3Q53FZ2 586 aa5.66□□□□□ -1.5
CTDNEP1-204ENST00000570484 ZBTB37Q5TC79 503 aa5.66□□□□□ -1.5
CTDNEP1-204ENST00000570484 MBNL2Q5VZF2 373 aaKnown RBP5.66□□□□□ -1.5
CTDNEP1-204ENST00000570484 PLCXD3Q63HM9 321 aa5.66□□□□□ -1.5
CTDNEP1-204ENST00000570484 C22orf42Q6IC83 251 aa5.66□□□□□ -1.5
CTDNEP1-204ENST00000570484 FBXW12Q6X9E4 464 aa5.66□□□□□ -1.5
CTDNEP1-204ENST00000570484 GDPGP1Q6ZNW5 385 aa5.66□□□□□ -1.5
CTDNEP1-204ENST00000570484 C22orf34Q6ZV56 151 aa5.66□□□□□ -1.5
CTDNEP1-204ENST00000570484 CEACAM19Q7Z692 300 aa5.66□□□□□ -1.5
CTDNEP1-204ENST00000570484 TMEM200AQ86VY9 491 aa5.66□□□□□ -1.5
CTDNEP1-204ENST00000570484 RDH10Q8IZV5 341 aa5.66□□□□□ -1.5
CTDNEP1-204ENST00000570484 OR5AS1Q8N127 324 aa5.66□□□□□ -1.5
CTDNEP1-204ENST00000570484 FBXL14Q8N1E6 418 aa5.66□□□□□ -1.5
CTDNEP1-204ENST00000570484 OR51A4Q8NGJ6 313 aa5.66□□□□□ -1.5
CTDNEP1-204ENST00000570484 OR5D14Q8NGL3 314 aa5.66□□□□□ -1.5
CTDNEP1-204ENST00000570484 OR8S1Q8NH09 359 aa5.66□□□□□ -1.5
CTDNEP1-204ENST00000570484 ZNF420Q8TAQ5 688 aaPredicted RBP5.66□□□□□ -1.5
CTDNEP1-204ENST00000570484 KLF14Q8TD94 323 aaPredicted RBP5.66□□□□□ -1.5
CTDNEP1-204ENST00000570484 PP6455Q8WZ26 134 aa5.66□□□□□ -1.5
CTDNEP1-204ENST00000570484 RGP1Q92546 391 aaPredicted RBP5.66□□□□□ -1.5
CTDNEP1-204ENST00000570484 PHYHIPQ92561 330 aa5.66□□□□□ -1.5
CTDNEP1-204ENST00000570484 FBXW5Q969U6 566 aa5.66□□□□□ -1.5
CTDNEP1-204ENST00000570484 PPP1R14AQ96A00 147 aa5.66□□□□□ -1.5
CTDNEP1-204ENST00000570484 SPSB4Q96A44 273 aa5.66□□□□□ -1.5
CTDNEP1-204ENST00000570484 SGK3Q96BR1 496 aa5.66□□□□□ -1.5
CTDNEP1-204ENST00000570484 C10orf35Q96D05 121 aa5.66□□□□□ -1.5
CTDNEP1-204ENST00000570484 CMBLQ96DG6 245 aa5.66□□□□□ -1.5
CTDNEP1-204ENST00000570484 YIPF6Q96EC8 236 aa5.66□□□□□ -1.5
CTDNEP1-204ENST00000570484 RHOVQ96L33 236 aa5.66□□□□□ -1.5
CTDNEP1-204ENST00000570484 KCTD7Q96MP8 289 aa5.66□□□□□ -1.5
CTDNEP1-204ENST00000570484 TECTBQ96PL2 329 aa5.66□□□□□ -1.5
CTDNEP1-204ENST00000570484 DERL3Q96Q80 235 aa5.66□□□□□ -1.5
CTDNEP1-204ENST00000570484 HIST1H2AAQ96QV6 131 aa5.66□□□□□ -1.5
CTDNEP1-204ENST00000570484 SPOCK3Q9BQ16 436 aa5.66□□□□□ -1.5
CTDNEP1-204ENST00000570484 BCL7BQ9BQE9 202 aa5.66□□□□□ -1.5
CTDNEP1-204ENST00000570484 SYT3Q9BQG1 590 aa5.66□□□□□ -1.5
CTDNEP1-204ENST00000570484 ADAT1Q9BUB4 502 aaKnown RBP5.66□□□□□ -1.5
CTDNEP1-204ENST00000570484 SSBP4Q9BWG4 385 aaPredicted RBP5.66□□□□□ -1.5
CTDNEP1-204ENST00000570484 FUNDC2Q9BWH2 189 aa5.66□□□□□ -1.5
CTDNEP1-204ENST00000570484 CHST5Q9GZS9 411 aa5.66□□□□□ -1.5
CTDNEP1-204ENST00000570484 PLK3Q9H4B4 646 aa5.66□□□□□ -1.5
CTDNEP1-204ENST00000570484 GSX1Q9H4S2 264 aaPredicted RBP5.66□□□□□ -1.5
CTDNEP1-204ENST00000570484 ABCB9Q9NP78 766 aa5.66□□□□□ -1.5
CTDNEP1-204ENST00000570484 NKIRAS2Q9NYR9 191 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms