RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 LIN37Q96GY3 246 aaPredicted RBP7.75□□□□□ -1.17
LINC00558-201ENST00000569422 RBM24Q9BX46 236 aaKnown RBP7.75□□□□□ -1.17
LINC00558-201ENST00000569422 OPN4Q9UHM6 478 aa7.75□□□□□ -1.17
LINC00558-201ENST00000569422 NPTNQ9Y639 398 aa7.75□□□□□ -1.17
LINC00558-201ENST00000569422 MEGF11A6BM72 1044 aa7.75□□□□□ -1.17
LINC00558-201ENST00000569422 SNRPGP15A8MWD9 76 aa7.75□□□□□ -1.17
LINC00558-201ENST00000569422 MCRIP1C9JLW8 97 aa7.75□□□□□ -1.17
LINC00558-201ENST00000569422 ZNF208O43345 1280 aa7.75□□□□□ -1.17
LINC00558-201ENST00000569422 KCNAB3O43448 404 aa7.75□□□□□ -1.17
LINC00558-201ENST00000569422 AQP8O94778 261 aa7.75□□□□□ -1.17
LINC00558-201ENST00000569422 HLA-AP01891 365 aaKnown RBP7.75□□□□□ -1.17
LINC00558-201ENST00000569422 IL5P05113 134 aa7.75□□□□□ -1.17
LINC00558-201ENST00000569422 VSIG8P0DPA2 414 aa7.75□□□□□ -1.17
LINC00558-201ENST00000569422 CCL3P10147 92 aa7.75□□□□□ -1.17
LINC00558-201ENST00000569422 CPN1P15169 458 aa7.75□□□□□ -1.17
LINC00558-201ENST00000569422 RAB3AP20336 220 aa7.75□□□□□ -1.17
LINC00558-201ENST00000569422 GUCA1AP43080 201 aaPredicted RBP7.75□□□□□ -1.17
LINC00558-201ENST00000569422 CLDN6P56747 220 aa7.75□□□□□ -1.17
LINC00558-201ENST00000569422 UNC119Q13432 240 aa7.75□□□□□ -1.17
LINC00558-201ENST00000569422 RNASE10Q5GAN6 216 aaKnown RBP7.75□□□□□ -1.17
LINC00558-201ENST00000569422 PXDC1Q5TGL8 231 aa7.75□□□□□ -1.17
LINC00558-201ENST00000569422 GLIPR1L1Q6UWM5 242 aa7.75□□□□□ -1.17
LINC00558-201ENST00000569422 CCDC28AQ8IWP9 274 aa7.75□□□□□ -1.17
LINC00558-201ENST00000569422 TMEM104Q8NE00 496 aa7.75□□□□□ -1.17
LINC00558-201ENST00000569422 NOXO1Q8NFA2 376 aa7.75□□□□□ -1.17
LINC00558-201ENST00000569422 OR10K1Q8NGX5 313 aa7.75□□□□□ -1.17
LINC00558-201ENST00000569422 MAFIPQ8WZ33 124 aa7.75□□□□□ -1.17
LINC00558-201ENST00000569422 ABHD17AQ96GS6 310 aa7.75□□□□□ -1.17
LINC00558-201ENST00000569422 ZNF160Q9HCG1 818 aa7.75□□□□□ -1.17
LINC00558-201ENST00000569422 IFT46Q9NQC8 304 aa7.75□□□□□ -1.17
LINC00558-201ENST00000569422 PTTG3PQ9NZH4 202 aa7.75□□□□□ -1.17
LINC00558-201ENST00000569422 AHCTF1Q8WYP5 2266 aa7.75□□□□□ -1.17
LINC00558-201ENST00000569422 PLSCR5A0PG75 271 aa7.75□□□□□ -1.17
LINC00558-201ENST00000569422 WIPF3A6NGB9 483 aa7.75□□□□□ -1.17
LINC00558-201ENST00000569422 PGA4P0DJD7 388 aa7.75□□□□□ -1.17
LINC00558-201ENST00000569422 PGA3P0DJD8 388 aa7.75□□□□□ -1.17
LINC00558-201ENST00000569422 HRH1P35367 487 aa7.75□□□□□ -1.17
LINC00558-201ENST00000569422 NUP62P37198 522 aaPredicted RBP7.75□□□□□ -1.17
LINC00558-201ENST00000569422 OR3A4PP47883 348 aa7.75□□□□□ -1.17
LINC00558-201ENST00000569422 MMP16P51512 607 aa7.75□□□□□ -1.17
LINC00558-201ENST00000569422 SEC61A1P61619 476 aaKnown RBP7.75□□□□□ -1.17
LINC00558-201ENST00000569422 ZNF813Q6ZN06 617 aa7.75□□□□□ -1.17
LINC00558-201ENST00000569422 FAM219AQ8IW50 185 aa7.75□□□□□ -1.17
LINC00558-201ENST00000569422 MCEMP1Q8IX19 187 aa7.75□□□□□ -1.17
LINC00558-201ENST00000569422 PAQR4Q8N4S7 273 aaPredicted RBP7.75□□□□□ -1.17
LINC00558-201ENST00000569422 C12orf45Q8N5I9 185 aaPredicted RBP7.75□□□□□ -1.17
LINC00558-201ENST00000569422 SPICQ8N5J4 248 aa7.75□□□□□ -1.17
LINC00558-201ENST00000569422 STEAP2Q8NFT2 490 aa7.75□□□□□ -1.17
LINC00558-201ENST00000569422 OR8B12Q8NGG6 310 aa7.75□□□□□ -1.17
LINC00558-201ENST00000569422 EDAQ92838 391 aa7.75□□□□□ -1.17
LINC00558-201ENST00000569422 PARD6GQ9BYG4 376 aaPredicted RBP7.75□□□□□ -1.17
LINC00558-201ENST00000569422 ZFP57Q9NU63 452 aa7.75□□□□□ -1.17
LINC00558-201ENST00000569422 TRAF3IP2O43734 574 aaPredicted RBP7.74□□□□□ -1.17
LINC00558-201ENST00000569422 G0S2P27469 103 aa7.74□□□□□ -1.17
LINC00558-201ENST00000569422 CX3CR1P49238 355 aa7.74□□□□□ -1.17
LINC00558-201ENST00000569422 CLDN23Q96B33 292 aa7.74□□□□□ -1.17
LINC00558-201ENST00000569422 FAM122AQ96E09 287 aa7.74□□□□□ -1.17
LINC00558-201ENST00000569422 ZNF385AQ96PM9 386 aaKnown RBP7.74□□□□□ -1.17
LINC00558-201ENST00000569422 CDX2Q99626 313 aaPredicted RBP7.74□□□□□ -1.17
LINC00558-201ENST00000569422 MRPL13Q9BYD1 178 aaKnown RBP7.74□□□□□ -1.17
LINC00558-201ENST00000569422 GSX2Q9BZM3 304 aa7.74□□□□□ -1.17
LINC00558-201ENST00000569422 SLC26A1Q9H2B4 701 aa7.74□□□□□ -1.17
LINC00558-201ENST00000569422 OR2M5A3KFT3 312 aa7.74□□□□□ -1.17
LINC00558-201ENST00000569422 OR5H15A6NDH6 313 aa7.74□□□□□ -1.17
LINC00558-201ENST00000569422 ZNF878C9JN71 531 aa7.74□□□□□ -1.17
LINC00558-201ENST00000569422 E9PLN8 166 aa7.74□□□□□ -1.17
LINC00558-201ENST00000569422 RAB27BO00194 218 aa7.74□□□□□ -1.17
LINC00558-201ENST00000569422 TP53I11O14683 189 aa7.74□□□□□ -1.17
LINC00558-201ENST00000569422 TOX3O15405 576 aaPredicted RBP7.74□□□□□ -1.17
LINC00558-201ENST00000569422 ZNHIT1O43257 154 aa7.74□□□□□ -1.17
LINC00558-201ENST00000569422 PDGFAP04085 211 aa7.74□□□□□ -1.17
LINC00558-201ENST00000569422 IFNA6P05013 189 aa7.74□□□□□ -1.17
LINC00558-201ENST00000569422 PI3P19957 117 aa7.74□□□□□ -1.17
LINC00558-201ENST00000569422 AVPR2P30518 371 aa7.74□□□□□ -1.17
LINC00558-201ENST00000569422 GNG10P50151 68 aa7.74□□□□□ -1.17
LINC00558-201ENST00000569422 SUMO3P55854 103 aaPredicted RBP7.74□□□□□ -1.17
LINC00558-201ENST00000569422 ATPAF1Q5TC12 328 aaPredicted RBP7.74□□□□□ -1.17
LINC00558-201ENST00000569422 ZNF385CQ66K41 422 aaPredicted RBP7.74□□□□□ -1.17
LINC00558-201ENST00000569422 TMUB2Q71RG4 321 aa7.74□□□□□ -1.17
LINC00558-201ENST00000569422 BEST3Q8N1M1 668 aa7.74□□□□□ -1.17
LINC00558-201ENST00000569422 SLC22A24Q8N4F4 322 aa7.74□□□□□ -1.17
LINC00558-201ENST00000569422 SLC24A4Q8NFF2 622 aa7.74□□□□□ -1.17
LINC00558-201ENST00000569422 LRRC20Q8TCA0 184 aa7.74□□□□□ -1.17
LINC00558-201ENST00000569422 CXorf58Q96LI9 332 aa7.74□□□□□ -1.17
LINC00558-201ENST00000569422 ZNF416Q9BWM5 594 aa7.74□□□□□ -1.17
LINC00558-201ENST00000569422 MFFQ9GZY8 342 aa7.74□□□□□ -1.17
LINC00558-201ENST00000569422 NARFLQ9H6Q4 476 aa7.74□□□□□ -1.17
LINC00558-201ENST00000569422 PRR13Q9NZ81 148 aa7.74□□□□□ -1.17
LINC00558-201ENST00000569422 KLF2Q9Y5W3 355 aaPredicted RBP7.74□□□□□ -1.17
LINC00558-201ENST00000569422 CHCHD2Q9Y6H1 151 aaPredicted RBP7.74□□□□□ -1.17
LINC00558-201ENST00000569422 C13orf42A0A1B0GVH6 325 aa7.73□□□□□ -1.17
LINC00558-201ENST00000569422 RPS10-NUDT3A0A1W2PQS6 291 aa7.73□□□□□ -1.17
LINC00558-201ENST00000569422 A8MXE2 369 aa7.73□□□□□ -1.17
LINC00558-201ENST00000569422 SOCS1O15524 211 aa7.73□□□□□ -1.17
LINC00558-201ENST00000569422 ISG15P05161 165 aa7.73□□□□□ -1.17
LINC00558-201ENST00000569422 DBHP09172 617 aa7.73□□□□□ -1.17
LINC00558-201ENST00000569422 GABRA1P14867 456 aa7.73□□□□□ -1.17
LINC00558-201ENST00000569422 PPP3CBP16298 524 aa7.73□□□□□ -1.17
LINC00558-201ENST00000569422 FSTP19883 344 aa7.73□□□□□ -1.17
LINC00558-201ENST00000569422 MSX1P28360 303 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms