RNA–Protein interactions for RNA: ENST00000564600.6

CHD9-211, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-211ENST00000564600 NLRC5Q86WI3 1866 aa1.32□□□□□ -2.2
CHD9-211ENST00000564600 PCDH11XQ9BZA7 1347 aa1.32□□□□□ -2.2
CHD9-211ENST00000564600 DHX57Q6P158 1386 aaKnown RBP1.32□□□□□ -2.2
CHD9-211ENST00000564600 TNS2Q63HR2 1409 aa1.32□□□□□ -2.2
CHD9-211ENST00000564600 BRCA1P38398 1863 aaKnown RBP1.31□□□□□ -2.2
CHD9-211ENST00000564600 IGHV1-69DA0A0B4J2H0 117 aa1.31□□□□□ -2.2
CHD9-211ENST00000564600 A0A1W2PP18 115 aa1.31□□□□□ -2.2
CHD9-211ENST00000564600 A0A1W2PPV4 95 aa1.31□□□□□ -2.2
CHD9-211ENST00000564600 KRBOX1C9JBD0 128 aa1.31□□□□□ -2.2
CHD9-211ENST00000564600 H0YJW9 148 aa1.31□□□□□ -2.2
CHD9-211ENST00000564600 UPK1BO75841 260 aa1.31□□□□□ -2.2
CHD9-211ENST00000564600 VAPBO95292 243 aa1.31□□□□□ -2.2
CHD9-211ENST00000564600 APCSP02743 223 aa1.31□□□□□ -2.2
CHD9-211ENST00000564600 OR8U9P0C7N5 309 aa1.31□□□□□ -2.2
CHD9-211ENST00000564600 PRPS2P11908 318 aa1.31□□□□□ -2.2
CHD9-211ENST00000564600 CSNK2A2P19784 350 aaPredicted RBP1.31□□□□□ -2.2
CHD9-211ENST00000564600 IL32P24001 234 aa1.31□□□□□ -2.2
CHD9-211ENST00000564600 CXCR1P25024 350 aa1.31□□□□□ -2.2
CHD9-211ENST00000564600 CFHR2P36980 270 aa1.31□□□□□ -2.2
CHD9-211ENST00000564600 OPRK1P41145 380 aa1.31□□□□□ -2.2
CHD9-211ENST00000564600 AP1S2P56377 157 aa1.31□□□□□ -2.2
CHD9-211ENST00000564600 YWHAEP62258 255 aaKnown RBP1.31□□□□□ -2.2
CHD9-211ENST00000564600 RAP1AP62834 184 aa1.31□□□□□ -2.2
CHD9-211ENST00000564600 MEF2BQ02080 365 aaPredicted RBP1.31□□□□□ -2.2
CHD9-211ENST00000564600 ZNF816Q0VGE8 651 aaPredicted RBP1.31□□□□□ -2.2
CHD9-211ENST00000564600 TOMM34Q15785 309 aaPredicted RBP1.31□□□□□ -2.2
CHD9-211ENST00000564600 COX19Q49B96 90 aa1.31□□□□□ -2.2
CHD9-211ENST00000564600 PTPN20Q4JDL3 420 aa1.31□□□□□ -2.2
CHD9-211ENST00000564600 RNASE13Q5GAN3 156 aaKnown RBP1.31□□□□□ -2.2
CHD9-211ENST00000564600 PRMT9Q6P2P2 845 aa1.31□□□□□ -2.2
CHD9-211ENST00000564600 PLET1Q6UQ28 207 aa1.31□□□□□ -2.2
CHD9-211ENST00000564600 CALHM1Q8IU99 346 aa1.31□□□□□ -2.2
CHD9-211ENST00000564600 RIMKLAQ8IXN7 391 aa1.31□□□□□ -2.2
CHD9-211ENST00000564600 RNF10Q8N5U6 811 aaKnown RBP1.31□□□□□ -2.2
CHD9-211ENST00000564600 NECAP1Q8NC96 275 aa1.31□□□□□ -2.2
CHD9-211ENST00000564600 OR4M1Q8NGD0 313 aa1.31□□□□□ -2.2
CHD9-211ENST00000564600 OR8U1Q8NH10 309 aa1.31□□□□□ -2.2
CHD9-211ENST00000564600 OR1L1Q8NH94 360 aa1.31□□□□□ -2.2
CHD9-211ENST00000564600 ENKURQ8TC29 256 aa1.31□□□□□ -2.2
CHD9-211ENST00000564600 ZNF75CPQ92670 426 aaPredicted RBP1.31□□□□□ -2.2
CHD9-211ENST00000564600 ECHDC3Q96DC8 303 aa1.31□□□□□ -2.2
CHD9-211ENST00000564600 SGTBQ96EQ0 304 aa1.31□□□□□ -2.2
CHD9-211ENST00000564600 CERS2Q96G23 380 aa1.31□□□□□ -2.2
CHD9-211ENST00000564600 PDXPQ96GD0 296 aa1.31□□□□□ -2.2
CHD9-211ENST00000564600 SULT4A1Q9BR01 284 aa1.31□□□□□ -2.2
CHD9-211ENST00000564600 OR51B5Q9H339 312 aa1.31□□□□□ -2.2
CHD9-211ENST00000564600 REEP1Q9H902 201 aa1.31□□□□□ -2.2
CHD9-211ENST00000564600 TMEM27Q9HBJ8 222 aa1.31□□□□□ -2.2
CHD9-211ENST00000564600 RRAGDQ9NQL2 400 aaPredicted RBP1.31□□□□□ -2.2
CHD9-211ENST00000564600 ZC4H2Q9NQZ6 224 aa1.31□□□□□ -2.2
CHD9-211ENST00000564600 PXMP2Q9NR77 195 aa1.31□□□□□ -2.2
CHD9-211ENST00000564600 C8orf17Q9NRJ1 99 aa1.31□□□□□ -2.2
CHD9-211ENST00000564600 MCUBQ9NWR8 336 aa1.31□□□□□ -2.2
CHD9-211ENST00000564600 SLC39A1Q9NY26 324 aa1.31□□□□□ -2.2
CHD9-211ENST00000564600 TFR2Q9UP52 801 aa1.31□□□□□ -2.2
CHD9-211ENST00000564600 SIGLEC9Q9Y336 463 aa1.31□□□□□ -2.2
CHD9-211ENST00000564600 TSSC4Q9Y5U2 329 aaPredicted RBP1.31□□□□□ -2.2
CHD9-211ENST00000564600 S4R3C0 116 aa1.31□□□□□ -2.2
CHD9-211ENST00000564600 FCGBPQ9Y6R7 5405 aaPredicted RBP1.3□□□□□ -2.2
CHD9-211ENST00000564600 CENPVL3A0A0U1RRI6 287 aa1.3□□□□□ -2.2
CHD9-211ENST00000564600 A0A1B0GW55 424 aa1.3□□□□□ -2.2
CHD9-211ENST00000564600 A8MUU9 505 aa1.3□□□□□ -2.2
CHD9-211ENST00000564600 E7EWF7 191 aa1.3□□□□□ -2.2
CHD9-211ENST00000564600 NDUFS8O00217 210 aa1.3□□□□□ -2.2
CHD9-211ENST00000564600 POLR1CO15160 346 aaPredicted RBP1.3□□□□□ -2.2
CHD9-211ENST00000564600 SIVA1O15304 175 aa1.3□□□□□ -2.2
CHD9-211ENST00000564600 NVLO15381 856 aaKnown RBP1.3□□□□□ -2.2
CHD9-211ENST00000564600 RBFOX2O43251 390 aaKnown RBP eCLIP1.3□□□□□ -2.2
CHD9-211ENST00000564600 CDC40O60508 579 aaKnown RBP eCLIP1.3□□□□□ -2.2
CHD9-211ENST00000564600 GMDSO60547 372 aa1.3□□□□□ -2.2
CHD9-211ENST00000564600 HSBP1O75506 76 aa1.3□□□□□ -2.2
CHD9-211ENST00000564600 TDP2O95551 362 aa1.3□□□□□ -2.2
CHD9-211ENST00000564600 CCNE2O96020 404 aa1.3□□□□□ -2.2
CHD9-211ENST00000564600 IGKV1D-16P01601 117 aa1.3□□□□□ -2.2
CHD9-211ENST00000564600 ZNF688P0C7X2 276 aa1.3□□□□□ -2.2
CHD9-211ENST00000564600 DUX4L2P0CJ85 424 aa1.3□□□□□ -2.2
CHD9-211ENST00000564600 DUX4L3P0CJ86 424 aa1.3□□□□□ -2.2
CHD9-211ENST00000564600 DUX4L5P0CJ88 424 aa1.3□□□□□ -2.2
CHD9-211ENST00000564600 DUX4L6P0CJ89 424 aa1.3□□□□□ -2.2
CHD9-211ENST00000564600 DUX4L7P0CJ90 424 aa1.3□□□□□ -2.2
CHD9-211ENST00000564600 THRAP10827 490 aa1.3□□□□□ -2.2
CHD9-211ENST00000564600 BGNP21810 368 aa1.3□□□□□ -2.2
CHD9-211ENST00000564600 CD70P32970 193 aa1.3□□□□□ -2.2
CHD9-211ENST00000564600 UBE2E1P51965 193 aa1.3□□□□□ -2.2
CHD9-211ENST00000564600 LCN2P80188 198 aa1.3□□□□□ -2.2
CHD9-211ENST00000564600 SIGLEC14Q08ET2 396 aa1.3□□□□□ -2.2
CHD9-211ENST00000564600 TRDNQ13061 729 aa1.3□□□□□ -2.2
CHD9-211ENST00000564600 IGFBP7Q16270 282 aa1.3□□□□□ -2.2
CHD9-211ENST00000564600 ZSCAN26Q16670 478 aa1.3□□□□□ -2.2
CHD9-211ENST00000564600 HNRNPA1L2Q32P51 320 aaKnown RBP1.3□□□□□ -2.2
CHD9-211ENST00000564600 MLIPQ5VWP3 458 aa1.3□□□□□ -2.2
CHD9-211ENST00000564600 FBXW9Q5XUX1 488 aa1.3□□□□□ -2.2
CHD9-211ENST00000564600 TTC19Q6DKK2 380 aaPredicted RBP1.3□□□□□ -2.2
CHD9-211ENST00000564600 CD300LGQ6UXG3 332 aa1.3□□□□□ -2.2
CHD9-211ENST00000564600 TMPRSS11AQ6ZMR5 421 aa1.3□□□□□ -2.2
CHD9-211ENST00000564600 RTL4Q6ZR62 310 aa1.3□□□□□ -2.2
CHD9-211ENST00000564600 LINC00469Q8N7U9 141 aa1.3□□□□□ -2.2
CHD9-211ENST00000564600 OR4K5Q8NGD3 323 aa1.3□□□□□ -2.2
CHD9-211ENST00000564600 OR5T3Q8NGG3 340 aa1.3□□□□□ -2.2
CHD9-211ENST00000564600 OR13C9Q8NGT0 318 aa1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms