RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 GCNT2Q8N0V5 402 aa13.54□□□□□ -0.24
COMMD4-210ENST00000564587 CPEB3Q8NE35 698 aaKnown RBP13.54□□□□□ -0.24
COMMD4-210ENST00000564587 OR51D1Q8NGF3 324 aa13.54□□□□□ -0.24
COMMD4-210ENST00000564587 SPSB4Q96A44 273 aa13.54□□□□□ -0.24
COMMD4-210ENST00000564587 RFT1Q96AA3 541 aa13.54□□□□□ -0.24
COMMD4-210ENST00000564587 APOBEC3DQ96AK3 386 aaPredicted RBP13.54□□□□□ -0.24
COMMD4-210ENST00000564587 SLC25A38Q96DW6 304 aa13.54□□□□□ -0.24
COMMD4-210ENST00000564587 MOV10Q9HCE1 1003 aaKnown RBP13.54□□□□□ -0.24
COMMD4-210ENST00000564587 OBP2BQ9NPH6 170 aa13.54□□□□□ -0.24
COMMD4-210ENST00000564587 B3GNT2Q9NY97 397 aa13.54□□□□□ -0.24
COMMD4-210ENST00000564587 GHRLQ9UBU3 117 aa13.54□□□□□ -0.24
COMMD4-210ENST00000564587 PIGLQ9Y2B2 252 aa13.54□□□□□ -0.24
COMMD4-210ENST00000564587 RAXQ9Y2V3 346 aa13.54□□□□□ -0.24
COMMD4-210ENST00000564587 GTF3C1Q12789 2109 aa13.54□□□□□ -0.24
COMMD4-210ENST00000564587 DOCK7Q96N67 2140 aa13.54□□□□□ -0.24
COMMD4-210ENST00000564587 CIB4A0PJX0 185 aa13.53□□□□□ -0.24
COMMD4-210ENST00000564587 XRCC3O43542 346 aa13.53□□□□□ -0.24
COMMD4-210ENST00000564587 WISP2O76076 250 aa13.53□□□□□ -0.24
COMMD4-210ENST00000564587 COX5AP20674 150 aa13.53□□□□□ -0.24
COMMD4-210ENST00000564587 IGHV1-2P23083 117 aa13.53□□□□□ -0.24
COMMD4-210ENST00000564587 HOXC12P31275 282 aa13.53□□□□□ -0.24
COMMD4-210ENST00000564587 CXADRP78310 365 aa13.53□□□□□ -0.24
COMMD4-210ENST00000564587 MRPL49Q13405 166 aaKnown RBP13.53□□□□□ -0.24
COMMD4-210ENST00000564587 CNN3Q15417 329 aaKnown RBP13.53□□□□□ -0.24
COMMD4-210ENST00000564587 TMEM69Q5SWH9 247 aa13.53□□□□□ -0.24
COMMD4-210ENST00000564587 BEND4Q6ZU67 534 aa13.53□□□□□ -0.24
COMMD4-210ENST00000564587 C17orf78Q8N4C9 275 aa13.53□□□□□ -0.24
COMMD4-210ENST00000564587 PNLDC1Q8NA58 520 aaKnown RBP13.53□□□□□ -0.24
COMMD4-210ENST00000564587 OR52N4Q8NGI2 321 aa13.53□□□□□ -0.24
COMMD4-210ENST00000564587 OR5L1Q8NGL2 311 aa13.53□□□□□ -0.24
COMMD4-210ENST00000564587 SPSB1Q96BD6 273 aa13.53□□□□□ -0.24
COMMD4-210ENST00000564587 THAP7Q9BT49 309 aaPredicted RBP13.53□□□□□ -0.24
COMMD4-210ENST00000564587 SLC22A4Q9H015 551 aa13.53□□□□□ -0.24
COMMD4-210ENST00000564587 TP63Q9H3D4 680 aaPredicted RBP13.53□□□□□ -0.24
COMMD4-210ENST00000564587 FAIMQ9NVQ4 179 aa13.53□□□□□ -0.24
COMMD4-210ENST00000564587 FBLN5Q9UBX5 448 aa13.53□□□□□ -0.24
COMMD4-210ENST00000564587 RAB22AQ9UL26 194 aa13.53□□□□□ -0.24
COMMD4-210ENST00000564587 A0A1B0GVG6 124 aa13.52□□□□□ -0.25
COMMD4-210ENST00000564587 METTL21EPA6NDL7 271 aa13.52□□□□□ -0.25
COMMD4-210ENST00000564587 E9PLN8 166 aa13.52□□□□□ -0.25
COMMD4-210ENST00000564587 PRRG2O14669 202 aa13.52□□□□□ -0.25
COMMD4-210ENST00000564587 HCKP08631 526 aa13.52□□□□□ -0.25
COMMD4-210ENST00000564587 TMIGD3P0DMS9 266 aaPredicted RBP13.52□□□□□ -0.25
COMMD4-210ENST00000564587 PRKACBP22694 351 aa13.52□□□□□ -0.25
COMMD4-210ENST00000564587 GABRA6Q16445 453 aa13.52□□□□□ -0.25
COMMD4-210ENST00000564587 RAB12Q6IQ22 244 aa13.52□□□□□ -0.25
COMMD4-210ENST00000564587 OR2W3Q7Z3T1 314 aa13.52□□□□□ -0.25
COMMD4-210ENST00000564587 CD163Q86VB7 1156 aa13.52□□□□□ -0.25
COMMD4-210ENST00000564587 OR5AS1Q8N127 324 aa13.52□□□□□ -0.25
COMMD4-210ENST00000564587 POM121L2Q96KW2 1035 aa13.52□□□□□ -0.25
COMMD4-210ENST00000564587 ABHD1Q96SE0 405 aa13.52□□□□□ -0.25
COMMD4-210ENST00000564587 CGGBP1Q9UFW8 167 aaPredicted RBP13.52□□□□□ -0.25
COMMD4-210ENST00000564587 TBC1D24Q9ULP9 559 aa13.52□□□□□ -0.25
COMMD4-210ENST00000564587 MRPS7Q9Y2R9 242 aaKnown RBP13.52□□□□□ -0.25
COMMD4-210ENST00000564587 LOC100509620A0A075B734 347 aa13.51□□□□□ -0.25
COMMD4-210ENST00000564587 TMEM272A0A1B0GTI8 110 aa13.51□□□□□ -0.25
COMMD4-210ENST00000564587 hCG_38984A0A1B0GV85 526 aa13.51□□□□□ -0.25
COMMD4-210ENST00000564587 C5orf49A4QMS7 147 aa13.51□□□□□ -0.25
COMMD4-210ENST00000564587 GABARAPH6UMI1 98 aa13.51□□□□□ -0.25
COMMD4-210ENST00000564587 LDLRAD4O15165 306 aa13.51□□□□□ -0.25
COMMD4-210ENST00000564587 GSK3AP49840 483 aa13.51□□□□□ -0.25
COMMD4-210ENST00000564587 HGFACQ04756 655 aa13.51□□□□□ -0.25
COMMD4-210ENST00000564587 RBPJQ06330 500 aa13.51□□□□□ -0.25
COMMD4-210ENST00000564587 OR8B8Q15620 311 aa13.51□□□□□ -0.25
COMMD4-210ENST00000564587 TBC1D28Q2M2D7 210 aa13.51□□□□□ -0.25
COMMD4-210ENST00000564587 HIKESHIQ53FT3 197 aa13.51□□□□□ -0.25
COMMD4-210ENST00000564587 CLVS2Q5SYC1 327 aa13.51□□□□□ -0.25
COMMD4-210ENST00000564587 KDF1Q8NAX2 398 aaPredicted RBP13.51□□□□□ -0.25
COMMD4-210ENST00000564587 SMIM4Q8WVI0 70 aa13.51□□□□□ -0.25
COMMD4-210ENST00000564587 C7orf50Q9BRJ6 194 aaKnown RBP13.51□□□□□ -0.25
COMMD4-210ENST00000564587 SOX7Q9BT81 388 aa13.51□□□□□ -0.25
COMMD4-210ENST00000564587 SFXN3Q9BWM7 321 aa13.51□□□□□ -0.25
COMMD4-210ENST00000564587 CNTD2Q9H8S5 307 aa13.51□□□□□ -0.25
COMMD4-210ENST00000564587 ZNF816-ZNF321PA0A0X1KG74 233 aa13.5□□□□□ -0.25
COMMD4-210ENST00000564587 C5orf63A6NC05 138 aa13.5□□□□□ -0.25
COMMD4-210ENST00000564587 CENPXA8MT69 81 aa13.5□□□□□ -0.25
COMMD4-210ENST00000564587 CTAG2O75638 210 aa13.5□□□□□ -0.25
COMMD4-210ENST00000564587 TNFSF13O75888 250 aa13.5□□□□□ -0.25
COMMD4-210ENST00000564587 ECDO95905 644 aaPredicted RBP13.5□□□□□ -0.25
COMMD4-210ENST00000564587 CGAP01215 116 aa13.5□□□□□ -0.25
COMMD4-210ENST00000564587 GSTT2BP0CG30 244 aa13.5□□□□□ -0.25
COMMD4-210ENST00000564587 FAHP16930 419 aa13.5□□□□□ -0.25
COMMD4-210ENST00000564587 CDK2P24941 298 aa13.5□□□□□ -0.25
COMMD4-210ENST00000564587 CEACAM8P31997 349 aaPredicted RBP13.5□□□□□ -0.25
COMMD4-210ENST00000564587 ALDH3B1P43353 468 aa13.5□□□□□ -0.25
COMMD4-210ENST00000564587 TDGF1P3P51864 188 aa13.5□□□□□ -0.25
COMMD4-210ENST00000564587 AP3S2P59780 193 aa13.5□□□□□ -0.25
COMMD4-210ENST00000564587 FAM3AP98173 230 aa13.5□□□□□ -0.25
COMMD4-210ENST00000564587 ZNF57Q68EA5 555 aaPredicted RBP13.5□□□□□ -0.25
COMMD4-210ENST00000564587 TMEM42Q69YG0 159 aa13.5□□□□□ -0.25
COMMD4-210ENST00000564587 RTL6Q6ICC9 239 aa13.5□□□□□ -0.25
COMMD4-210ENST00000564587 VWA1Q6PCB0 445 aa13.5□□□□□ -0.25
COMMD4-210ENST00000564587 UNQ6126/PRO20091Q6UXV3 157 aa13.5□□□□□ -0.25
COMMD4-210ENST00000564587 MDP1Q86V88 176 aa13.5□□□□□ -0.25
COMMD4-210ENST00000564587 GABRG1Q8N1C3 465 aa13.5□□□□□ -0.25
COMMD4-210ENST00000564587 FTMTQ8N4E7 242 aa13.5□□□□□ -0.25
COMMD4-210ENST00000564587 CISD2Q8N5K1 135 aaKnown RBP13.5□□□□□ -0.25
COMMD4-210ENST00000564587 Q8NA96 180 aa13.5□□□□□ -0.25
COMMD4-210ENST00000564587 CSNK2A3Q8NEV1 391 aa13.5□□□□□ -0.25
COMMD4-210ENST00000564587 SSC4DQ8WTU2 575 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms