RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 PARP16Q8N5Y8 322 aa11.05□□□□□ -0.64
CLK3-214ENST00000564096 OR5D14Q8NGL3 314 aa11.05□□□□□ -0.64
CLK3-214ENST00000564096 OR14K1Q8NGZ2 314 aa11.05□□□□□ -0.64
CLK3-214ENST00000564096 LINC01560Q8TB33 94 aa11.05□□□□□ -0.64
CLK3-214ENST00000564096 NDNFQ8TB73 568 aa11.05□□□□□ -0.64
CLK3-214ENST00000564096 SLC25A40Q8TBP6 338 aa11.05□□□□□ -0.64
CLK3-214ENST00000564096 REPIN1Q9BWE0 567 aaKnown RBP11.05□□□□□ -0.64
CLK3-214ENST00000564096 CHST5Q9GZS9 411 aa11.05□□□□□ -0.64
CLK3-214ENST00000564096 ABCB9Q9NP78 766 aa11.05□□□□□ -0.64
CLK3-214ENST00000564096 NPDC1Q9NQX5 325 aaPredicted RBP11.05□□□□□ -0.64
CLK3-214ENST00000564096 KCNN3Q9UGI6 736 aa11.05□□□□□ -0.64
CLK3-214ENST00000564096 FOXJ3Q9UPW0 622 aa11.05□□□□□ -0.64
CLK3-214ENST00000564096 STARD10Q9Y365 291 aa11.05□□□□□ -0.64
CLK3-214ENST00000564096 KLF2Q9Y5W3 355 aaPredicted RBP11.05□□□□□ -0.64
CLK3-214ENST00000564096 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.04□□□□□ -0.64
CLK3-214ENST00000564096 C5orf63A6NC05 138 aa11.04□□□□□ -0.64
CLK3-214ENST00000564096 ANKRD61A6NGH8 418 aa11.04□□□□□ -0.64
CLK3-214ENST00000564096 ANXA2P2A6NMY6 339 aa11.04□□□□□ -0.64
CLK3-214ENST00000564096 ANKRD30BLA7E2S9 258 aa11.04□□□□□ -0.64
CLK3-214ENST00000564096 VSTM5A8MXK1 200 aa11.04□□□□□ -0.64
CLK3-214ENST00000564096 MAGEB3O15480 346 aa11.04□□□□□ -0.64
CLK3-214ENST00000564096 FAHP16930 419 aa11.04□□□□□ -0.64
CLK3-214ENST00000564096 RAB3AP20336 220 aa11.04□□□□□ -0.64
CLK3-214ENST00000564096 ANOS1P23352 680 aa11.04□□□□□ -0.64
CLK3-214ENST00000564096 GLRXP35754 106 aa11.04□□□□□ -0.64
CLK3-214ENST00000564096 RANBP1P43487 201 aa11.04□□□□□ -0.64
CLK3-214ENST00000564096 PSMD7P51665 324 aa11.04□□□□□ -0.64
CLK3-214ENST00000564096 SPOCK1Q08629 439 aa11.04□□□□□ -0.64
CLK3-214ENST00000564096 SPCS2Q15005 226 aa11.04□□□□□ -0.64
CLK3-214ENST00000564096 ZNF718Q3SXZ3 478 aa11.04□□□□□ -0.64
CLK3-214ENST00000564096 NCMAPQ5T1S8 102 aa11.04□□□□□ -0.64
CLK3-214ENST00000564096 FAM27D1Q5T7N8 215 aa11.04□□□□□ -0.64
CLK3-214ENST00000564096 MBNL2Q5VZF2 373 aaKnown RBP11.04□□□□□ -0.64
CLK3-214ENST00000564096 CROCCP3Q8IVE0 287 aa11.04□□□□□ -0.64
CLK3-214ENST00000564096 OR56B2PQ8NGI1 322 aa11.04□□□□□ -0.64
CLK3-214ENST00000564096 SSC4DQ8WTU2 575 aa11.04□□□□□ -0.64
CLK3-214ENST00000564096 FAM222BQ8WU58 562 aa11.04□□□□□ -0.64
CLK3-214ENST00000564096 FGGYQ96C11 551 aa11.04□□□□□ -0.64
CLK3-214ENST00000564096 PLPPR2Q96GM1 343 aa11.04□□□□□ -0.64
CLK3-214ENST00000564096 OR2J1Q9GZK6 312 aa11.04□□□□□ -0.64
CLK3-214ENST00000564096 ZCCHC4Q9H5U6 513 aa11.04□□□□□ -0.64
CLK3-214ENST00000564096 TAS2R4Q9NYW5 299 aa11.04□□□□□ -0.64
CLK3-214ENST00000564096 CCDC59Q9P031 241 aaKnown RBP11.04□□□□□ -0.64
CLK3-214ENST00000564096 NOP16Q9Y3C1 178 aaKnown RBP11.04□□□□□ -0.64
CLK3-214ENST00000564096 RNF115Q9Y4L5 304 aa11.04□□□□□ -0.64
CLK3-214ENST00000564096 A0A1W2PPK0 400 aa11.03□□□□□ -0.64
CLK3-214ENST00000564096 A0A1W2PPW3 197 aa11.03□□□□□ -0.64
CLK3-214ENST00000564096 MEGF11A6BM72 1044 aa11.03□□□□□ -0.64
CLK3-214ENST00000564096 CD300LBA8K4G0 201 aa11.03□□□□□ -0.64
CLK3-214ENST00000564096 J3QKU1 62 aa11.03□□□□□ -0.64
CLK3-214ENST00000564096 SULT1B1O43704 296 aa11.03□□□□□ -0.64
CLK3-214ENST00000564096 CDRT1O95170 752 aa11.03□□□□□ -0.64
CLK3-214ENST00000564096 GOSR1O95249 250 aa11.03□□□□□ -0.64
CLK3-214ENST00000564096 PLA2G2AP14555 144 aa11.03□□□□□ -0.64
CLK3-214ENST00000564096 SRMP19623 302 aa11.03□□□□□ -0.64
CLK3-214ENST00000564096 RAB3BP20337 219 aa11.03□□□□□ -0.64
CLK3-214ENST00000564096 SDC2P34741 201 aa11.03□□□□□ -0.64
CLK3-214ENST00000564096 HLXQ14774 488 aaPredicted RBP11.03□□□□□ -0.64
CLK3-214ENST00000564096 CLVS2Q5SYC1 327 aa11.03□□□□□ -0.64
CLK3-214ENST00000564096 ADAM5Q6NVV9 412 aa11.03□□□□□ -0.64
CLK3-214ENST00000564096 C22orf34Q6ZV56 151 aa11.03□□□□□ -0.64
CLK3-214ENST00000564096 UTS2BQ765I0 119 aa11.03□□□□□ -0.64
CLK3-214ENST00000564096 OR13C9Q8NGT0 318 aa11.03□□□□□ -0.64
CLK3-214ENST00000564096 KLF14Q8TD94 323 aaPredicted RBP11.03□□□□□ -0.64
CLK3-214ENST00000564096 AP3S1Q92572 193 aa11.03□□□□□ -0.64
CLK3-214ENST00000564096 PIGTQ969N2 578 aa11.03□□□□□ -0.64
CLK3-214ENST00000564096 ADAT3Q96EY9 351 aaPredicted RBP11.03□□□□□ -0.64
CLK3-214ENST00000564096 DCUN1D5Q9BTE7 237 aa11.03□□□□□ -0.64
CLK3-214ENST00000564096 PAPOLGQ9BWT3 736 aaKnown RBP11.03□□□□□ -0.64
CLK3-214ENST00000564096 RNF167Q9H6Y7 350 aa11.03□□□□□ -0.64
CLK3-214ENST00000564096 ZNF442Q9H7R0 627 aa11.03□□□□□ -0.64
CLK3-214ENST00000564096 MRPL15Q9P015 296 aaKnown RBP11.03□□□□□ -0.64
CLK3-214ENST00000564096 CGGBP1Q9UFW8 167 aaPredicted RBP11.03□□□□□ -0.64
CLK3-214ENST00000564096 ATP23Q9Y6H3 246 aa11.03□□□□□ -0.64
CLK3-214ENST00000564096 NBASA2RRP1 2371 aa11.03□□□□□ -0.64
CLK3-214ENST00000564096 CACNA1CQ13936 2221 aa11.03□□□□□ -0.64
CLK3-214ENST00000564096 DPRXA6NFQ7 191 aa11.02□□□□□ -0.65
CLK3-214ENST00000564096 PIN1P1O15428 100 aa11.02□□□□□ -0.65
CLK3-214ENST00000564096 TIMM8AO60220 97 aaPredicted RBP11.02□□□□□ -0.65
CLK3-214ENST00000564096 TMEM127O75204 238 aa11.02□□□□□ -0.65
CLK3-214ENST00000564096 ACKR3P25106 362 aa11.02□□□□□ -0.65
CLK3-214ENST00000564096 TGFBR1P36897 503 aa11.02□□□□□ -0.65
CLK3-214ENST00000564096 KLF3P57682 345 aaPredicted RBP11.02□□□□□ -0.65
CLK3-214ENST00000564096 ERVS71-1P61550 626 aa11.02□□□□□ -0.65
CLK3-214ENST00000564096 NKX6-1P78426 367 aaPredicted RBP11.02□□□□□ -0.65
CLK3-214ENST00000564096 MXD1Q05195 221 aa11.02□□□□□ -0.65
CLK3-214ENST00000564096 SNTB1Q13884 538 aaKnown RBP11.02□□□□□ -0.65
CLK3-214ENST00000564096 MOGQ16653 247 aa11.02□□□□□ -0.65
CLK3-214ENST00000564096 DGUOKQ16854 277 aa11.02□□□□□ -0.65
CLK3-214ENST00000564096 CNPY1Q3B7I2 92 aa11.02□□□□□ -0.65
CLK3-214ENST00000564096 CEP78Q5JTW2 689 aa11.02□□□□□ -0.65
CLK3-214ENST00000564096 GLT8D1Q68CQ7 371 aa11.02□□□□□ -0.65
CLK3-214ENST00000564096 VHLLQ6RSH7 139 aa11.02□□□□□ -0.65
CLK3-214ENST00000564096 ZDHHC23Q8IYP9 409 aa11.02□□□□□ -0.65
CLK3-214ENST00000564096 OR1M1Q8NGA1 313 aa11.02□□□□□ -0.65
CLK3-214ENST00000564096 SLC25A46Q96AG3 418 aa11.02□□□□□ -0.65
CLK3-214ENST00000564096 SPSB1Q96BD6 273 aa11.02□□□□□ -0.65
CLK3-214ENST00000564096 CMBLQ96DG6 245 aa11.02□□□□□ -0.65
CLK3-214ENST00000564096 MARS2Q96GW9 593 aaKnown RBP11.02□□□□□ -0.65
CLK3-214ENST00000564096 SOX7Q9BT81 388 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms