RNA–Protein interactions for RNA: ENST00000559961.1

SNX1-209, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-209ENST00000559961 OR10G2Q8NGC3 310 aa10.48□□□□□ -0.73
SNX1-209ENST00000559961 OR6N2Q8NGY6 317 aa10.48□□□□□ -0.73
SNX1-209ENST00000559961 TBC1D15Q8TC07 691 aa10.48□□□□□ -0.73
SNX1-209ENST00000559961 GIPC3Q8TF64 312 aa10.48□□□□□ -0.73
SNX1-209ENST00000559961 REEP6Q96HR9 211 aa10.48□□□□□ -0.73
SNX1-209ENST00000559961 PGAM5Q96HS1 289 aa10.48□□□□□ -0.73
SNX1-209ENST00000559961 RGCCQ9H4X1 137 aa10.48□□□□□ -0.73
SNX1-209ENST00000559961 BEX1Q9HBH7 125 aa10.48□□□□□ -0.73
SNX1-209ENST00000559961 ARMC1Q9NVT9 282 aa10.48□□□□□ -0.73
SNX1-209ENST00000559961 CAB39Q9Y376 341 aaPredicted RBP10.48□□□□□ -0.73
SNX1-209ENST00000559961 FAM96BQ9Y3D0 163 aa10.48□□□□□ -0.73
SNX1-209ENST00000559961 DHRS12A0PJE2 317 aa10.47□□□□□ -0.73
SNX1-209ENST00000559961 PRR23D1E9PI22 279 aaPredicted RBP10.47□□□□□ -0.73
SNX1-209ENST00000559961 TMPRSS2O15393 492 aa10.47□□□□□ -0.73
SNX1-209ENST00000559961 HOXA3O43365 443 aaPredicted RBP10.47□□□□□ -0.73
SNX1-209ENST00000559961 PLATP00750 562 aa10.47□□□□□ -0.73
SNX1-209ENST00000559961 CST1P01037 141 aa10.47□□□□□ -0.73
SNX1-209ENST00000559961 GYPAP02724 150 aa10.47□□□□□ -0.73
SNX1-209ENST00000559961 PRR23D2P0DMB1 279 aaPredicted RBP10.47□□□□□ -0.73
SNX1-209ENST00000559961 MUC1P15941 1255 aaPredicted RBP10.47□□□□□ -0.73
SNX1-209ENST00000559961 EGR1P18146 543 aa10.47□□□□□ -0.73
SNX1-209ENST00000559961 ATP6V1B2P21281 511 aa10.47□□□□□ -0.73
SNX1-209ENST00000559961 OTX1P32242 354 aaPredicted RBP10.47□□□□□ -0.73
SNX1-209ENST00000559961 PSMB10P40306 273 aa10.47□□□□□ -0.73
SNX1-209ENST00000559961 MAGEA2P43356 314 aa10.47□□□□□ -0.73
SNX1-209ENST00000559961 IL5RAQ01344 420 aa10.47□□□□□ -0.73
SNX1-209ENST00000559961 PAX2Q02962 417 aa10.47□□□□□ -0.73
SNX1-209ENST00000559961 PPP1R8Q12972 351 aaKnown RBP10.47□□□□□ -0.73
SNX1-209ENST00000559961 LCN8Q6JVE9 175 aa10.47□□□□□ -0.73
SNX1-209ENST00000559961 BRD3OSQ6XYD6 125 aa10.47□□□□□ -0.73
SNX1-209ENST00000559961 FAM57BQ71RH2 274 aa10.47□□□□□ -0.73
SNX1-209ENST00000559961 RHOUQ7L0Q8 258 aa10.47□□□□□ -0.73
SNX1-209ENST00000559961 ZNF454Q8N9F8 522 aa10.47□□□□□ -0.73
SNX1-209ENST00000559961 CCDC197Q8NCU1 140 aa10.47□□□□□ -0.73
SNX1-209ENST00000559961 OR4F5Q8NH21 305 aa10.47□□□□□ -0.73
SNX1-209ENST00000559961 ST8SIA4Q92187 359 aa10.47□□□□□ -0.73
SNX1-209ENST00000559961 TMIGD2Q96BF3 282 aa10.47□□□□□ -0.73
SNX1-209ENST00000559961 DDOQ99489 341 aa10.47□□□□□ -0.73
SNX1-209ENST00000559961 RTL8AQ9BWD3 113 aa10.47□□□□□ -0.73
SNX1-209ENST00000559961 PAPOLGQ9BWT3 736 aaKnown RBP10.47□□□□□ -0.73
SNX1-209ENST00000559961 OR51V1Q9H2C8 321 aa10.47□□□□□ -0.73
SNX1-209ENST00000559961 RNPEPL1Q9HAU8 725 aa10.47□□□□□ -0.73
SNX1-209ENST00000559961 BRD7Q9NPI1 651 aa10.47□□□□□ -0.73
SNX1-209ENST00000559961 CMC2Q9NRP2 79 aa10.47□□□□□ -0.73
SNX1-209ENST00000559961 TNFRSF19Q9NS68 423 aa10.47□□□□□ -0.73
SNX1-209ENST00000559961 DNAJC27Q9NZQ0 273 aa10.47□□□□□ -0.73
SNX1-209ENST00000559961 DNAJB11Q9UBS4 358 aa10.47□□□□□ -0.73
SNX1-209ENST00000559961 BTBD17A6NE02 478 aa10.46□□□□□ -0.73
SNX1-209ENST00000559961 SRRM5B3KS81 715 aa10.46□□□□□ -0.73
SNX1-209ENST00000559961 GPR37O15354 613 aa10.46□□□□□ -0.73
SNX1-209ENST00000559961 NDUFB3O43676 98 aa10.46□□□□□ -0.73
SNX1-209ENST00000559961 GLCEO94923 617 aa10.46□□□□□ -0.73
SNX1-209ENST00000559961 KNG1P01042 644 aa10.46□□□□□ -0.73
SNX1-209ENST00000559961 GYS2P54840 703 aa10.46□□□□□ -0.73
SNX1-209ENST00000559961 RPS7P62081 194 aaKnown RBP10.46□□□□□ -0.73
SNX1-209ENST00000559961 DBPQ10586 325 aaPredicted RBP10.46□□□□□ -0.73
SNX1-209ENST00000559961 PCK2Q16822 640 aa10.46□□□□□ -0.73
SNX1-209ENST00000559961 DEFB112Q30KQ8 113 aa10.46□□□□□ -0.73
SNX1-209ENST00000559961 KLHL12Q53G59 568 aa10.46□□□□□ -0.73
SNX1-209ENST00000559961 ZNF770Q6IQ21 691 aaPredicted RBP10.46□□□□□ -0.73
SNX1-209ENST00000559961 CD300LDQ6UXZ3 194 aa10.46□□□□□ -0.73
SNX1-209ENST00000559961 KCTD8Q6ZWB6 473 aa10.46□□□□□ -0.73
SNX1-209ENST00000559961 BTN2A1Q7KYR7 527 aa10.46□□□□□ -0.73
SNX1-209ENST00000559961 SLC16A9Q7RTY1 509 aa10.46□□□□□ -0.73
SNX1-209ENST00000559961 TIGD4Q8IY51 512 aa10.46□□□□□ -0.73
SNX1-209ENST00000559961 TMEM86BQ8N661 226 aa10.46□□□□□ -0.73
SNX1-209ENST00000559961 PAPD5Q8NDF8 572 aaKnown RBP10.46□□□□□ -0.73
SNX1-209ENST00000559961 OR8D4Q8NGM9 314 aa10.46□□□□□ -0.73
SNX1-209ENST00000559961 THEM6Q8WUY1 208 aa10.46□□□□□ -0.73
SNX1-209ENST00000559961 LRRC29Q8WV35 223 aa10.46□□□□□ -0.73
SNX1-209ENST00000559961 SSMEM1Q8WWF3 244 aa10.46□□□□□ -0.73
SNX1-209ENST00000559961 ZNF48Q96MX3 618 aaPredicted RBP10.46□□□□□ -0.73
SNX1-209ENST00000559961 WDFY2Q96P53 400 aa10.46□□□□□ -0.73
SNX1-209ENST00000559961 CCT8L2Q96SF2 557 aa10.46□□□□□ -0.73
SNX1-209ENST00000559961 ABHD6Q9BV23 337 aa10.46□□□□□ -0.73
SNX1-209ENST00000559961 CHID1Q9BWS9 393 aa10.46□□□□□ -0.73
SNX1-209ENST00000559961 NMNAT2Q9BZQ4 307 aa10.46□□□□□ -0.73
SNX1-209ENST00000559961 ZNF696Q9H7X3 374 aa10.46□□□□□ -0.73
SNX1-209ENST00000559961 CNTD2Q9H8S5 307 aa10.46□□□□□ -0.73
SNX1-209ENST00000559961 WNK2Q9Y3S1 2297 aa10.46□□□□□ -0.74
SNX1-209ENST00000559961 NKX6-3A6NJ46 265 aa10.45□□□□□ -0.74
SNX1-209ENST00000559961 DVL1O14640 695 aa10.45□□□□□ -0.74
SNX1-209ENST00000559961 PTBP3O95758 552 aaKnown RBP10.45□□□□□ -0.74
SNX1-209ENST00000559961 LYNP07948 512 aa10.45□□□□□ -0.74
SNX1-209ENST00000559961 EEF1B2P24534 225 aaKnown RBP10.45□□□□□ -0.74
SNX1-209ENST00000559961 CFHR2P36980 270 aa10.45□□□□□ -0.74
SNX1-209ENST00000559961 GSK3AP49840 483 aa10.45□□□□□ -0.74
SNX1-209ENST00000559961 ZNF121P58317 390 aaPredicted RBP10.45□□□□□ -0.74
SNX1-209ENST00000559961 ARF6P62330 175 aa10.45□□□□□ -0.74
SNX1-209ENST00000559961 LRRC10Q5BKY1 277 aa10.45□□□□□ -0.74
SNX1-209ENST00000559961 LYPD4Q6UWN0 246 aa10.45□□□□□ -0.74
SNX1-209ENST00000559961 ZNF841Q6ZN19 808 aa10.45□□□□□ -0.74
SNX1-209ENST00000559961 ZNF826PQ6ZT77 177 aa10.45□□□□□ -0.74
SNX1-209ENST00000559961 OR4Q3Q8NH05 313 aa10.45□□□□□ -0.74
SNX1-209ENST00000559961 FAM81AQ8TBF8 368 aa10.45□□□□□ -0.74
SNX1-209ENST00000559961 RNF133Q8WVZ7 376 aa10.45□□□□□ -0.74
SNX1-209ENST00000559961 ZNRF4Q8WWF5 429 aa10.45□□□□□ -0.74
SNX1-209ENST00000559961 LHX4Q969G2 390 aa10.45□□□□□ -0.74
SNX1-209ENST00000559961 SPSB4Q96A44 273 aa10.45□□□□□ -0.74
SNX1-209ENST00000559961 SGK3Q96BR1 496 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms