RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 FN3KRPQ9HA64 309 aa7.16□□□□□ -1.26
TPM1-213ENST00000558400 C8orf4Q9NR00 106 aa7.16□□□□□ -1.26
TPM1-213ENST00000558400 CLN6Q9NWW5 311 aa7.16□□□□□ -1.26
TPM1-213ENST00000558400 PCDHGB1Q9Y5G3 927 aa7.16□□□□□ -1.26
TPM1-213ENST00000558400 CACNG2Q9Y698 323 aa7.16□□□□□ -1.26
TPM1-213ENST00000558400 PPIAL4EA0A075B759 164 aa7.15□□□□□ -1.26
TPM1-213ENST00000558400 ISPDA4D126 451 aa7.15□□□□□ -1.26
TPM1-213ENST00000558400 ANXA2P2A6NMY6 339 aa7.15□□□□□ -1.26
TPM1-213ENST00000558400 PPIAL4DF5H284 164 aa7.15□□□□□ -1.26
TPM1-213ENST00000558400 F5H5P2 479 aa7.15□□□□□ -1.26
TPM1-213ENST00000558400 H0YL77 283 aa7.15□□□□□ -1.26
TPM1-213ENST00000558400 EI24O14681 340 aa7.15□□□□□ -1.26
TPM1-213ENST00000558400 MLNRO43193 412 aa7.15□□□□□ -1.26
TPM1-213ENST00000558400 MTRF1O75570 445 aaKnown RBP7.15□□□□□ -1.26
TPM1-213ENST00000558400 FOXH1O75593 365 aa7.15□□□□□ -1.26
TPM1-213ENST00000558400 SULT1C4O75897 302 aa7.15□□□□□ -1.26
TPM1-213ENST00000558400 PTBP3O95758 552 aaKnown RBP7.15□□□□□ -1.26
TPM1-213ENST00000558400 IGHV2-5P01817 119 aa7.15□□□□□ -1.26
TPM1-213ENST00000558400 HLA-DPB1P04440 258 aa7.15□□□□□ -1.26
TPM1-213ENST00000558400 MSMBP08118 114 aa7.15□□□□□ -1.26
TPM1-213ENST00000558400 FAM157CP0CG43 387 aa7.15□□□□□ -1.26
TPM1-213ENST00000558400 PPIAL4FP0DN26 164 aa7.15□□□□□ -1.26
TPM1-213ENST00000558400 GATA3P23771 443 aa7.15□□□□□ -1.26
TPM1-213ENST00000558400 IL2RGP31785 369 aa7.15□□□□□ -1.26
TPM1-213ENST00000558400 THBS2P35442 1172 aa7.15□□□□□ -1.26
TPM1-213ENST00000558400 GNALP38405 381 aa7.15□□□□□ -1.26
TPM1-213ENST00000558400 MAP2K3P46734 347 aa7.15□□□□□ -1.26
TPM1-213ENST00000558400 GSK3AP49840 483 aa7.15□□□□□ -1.26
TPM1-213ENST00000558400 HCCSP53701 268 aa7.15□□□□□ -1.26
TPM1-213ENST00000558400 PSMA6P60900 246 aaKnown RBP7.15□□□□□ -1.26
TPM1-213ENST00000558400 CXCR4P61073 352 aa7.15□□□□□ -1.26
TPM1-213ENST00000558400 SNRPGP62308 76 aaKnown RBP7.15□□□□□ -1.26
TPM1-213ENST00000558400 BTG1P62324 171 aa7.15□□□□□ -1.26
TPM1-213ENST00000558400 IL5RAQ01344 420 aa7.15□□□□□ -1.26
TPM1-213ENST00000558400 MAB21L1Q13394 359 aa7.15□□□□□ -1.26
TPM1-213ENST00000558400 KCNJ8Q15842 424 aa7.15□□□□□ -1.26
TPM1-213ENST00000558400 OCLNQ16625 522 aa7.15□□□□□ -1.26
TPM1-213ENST00000558400 AVPI1Q5T686 147 aa7.15□□□□□ -1.26
TPM1-213ENST00000558400 LRRN1Q6UXK5 716 aa7.15□□□□□ -1.26
TPM1-213ENST00000558400 KCTD20Q7Z5Y7 419 aa7.15□□□□□ -1.26
TPM1-213ENST00000558400 SLC35F2Q8IXU6 374 aa7.15□□□□□ -1.26
TPM1-213ENST00000558400 OR10AD1Q8NGE0 317 aa7.15□□□□□ -1.26
TPM1-213ENST00000558400 OR56B2PQ8NGI1 322 aa7.15□□□□□ -1.26
TPM1-213ENST00000558400 OR8S1Q8NH09 359 aa7.15□□□□□ -1.26
TPM1-213ENST00000558400 FAM81AQ8TBF8 368 aa7.15□□□□□ -1.26
TPM1-213ENST00000558400 Q8TCH9 128 aa7.15□□□□□ -1.26
TPM1-213ENST00000558400 TMEM186Q96B77 213 aa7.15□□□□□ -1.26
TPM1-213ENST00000558400 RDH12Q96NR8 316 aa7.15□□□□□ -1.26
TPM1-213ENST00000558400 HIST1H2AAQ96QV6 131 aa7.15□□□□□ -1.26
TPM1-213ENST00000558400 OR8B4Q96RC9 309 aa7.15□□□□□ -1.26
TPM1-213ENST00000558400 NARFLQ9H6Q4 476 aa7.15□□□□□ -1.26
TPM1-213ENST00000558400 ADGRL4Q9HBW9 690 aa7.15□□□□□ -1.26
TPM1-213ENST00000558400 BRD7Q9NPI1 651 aa7.15□□□□□ -1.26
TPM1-213ENST00000558400 TRIM36Q9NQ86 728 aa7.15□□□□□ -1.26
TPM1-213ENST00000558400 HIF1ANQ9NWT6 349 aa7.15□□□□□ -1.26
TPM1-213ENST00000558400 DNAJC27Q9NZQ0 273 aa7.15□□□□□ -1.26
TPM1-213ENST00000558400 MIOXQ9UGB7 285 aa7.15□□□□□ -1.26
TPM1-213ENST00000558400 IKZF2Q9UKS7 526 aa7.15□□□□□ -1.26
TPM1-213ENST00000558400 PPIAL4AQ9Y536 164 aa7.15□□□□□ -1.26
TPM1-213ENST00000558400 LRP12Q9Y561 859 aa7.15□□□□□ -1.26
TPM1-213ENST00000558400 MPC1Q9Y5U8 109 aa7.15□□□□□ -1.26
TPM1-213ENST00000558400 YLPM1P49750 1951 aaKnown RBP7.15□□□□□ -1.27
TPM1-213ENST00000558400 CR1P17927 2039 aa7.15□□□□□ -1.27
TPM1-213ENST00000558400 MXRA5Q9NR99 2828 aa7.14□□□□□ -1.27
TPM1-213ENST00000558400 PPIAL4CA0A0B4J2A2 164 aa7.14□□□□□ -1.27
TPM1-213ENST00000558400 hCG_38984A0A1B0GV85 526 aa7.14□□□□□ -1.27
TPM1-213ENST00000558400 WNT9BO14905 357 aa7.14□□□□□ -1.27
TPM1-213ENST00000558400 WIPF1O43516 503 aa7.14□□□□□ -1.27
TPM1-213ENST00000558400 NDUFA2O43678 99 aa7.14□□□□□ -1.27
TPM1-213ENST00000558400 CST4P01036 141 aa7.14□□□□□ -1.27
TPM1-213ENST00000558400 IGHV2-70P01814 119 aa7.14□□□□□ -1.27
TPM1-213ENST00000558400 KRT8P05787 483 aa7.14□□□□□ -1.27
TPM1-213ENST00000558400 MRPL3P09001 348 aaKnown RBP7.14□□□□□ -1.27
TPM1-213ENST00000558400 ZNF16P17020 682 aaPredicted RBP7.14□□□□□ -1.27
TPM1-213ENST00000558400 MTNR1AP48039 350 aa7.14□□□□□ -1.27
TPM1-213ENST00000558400 SCGB2A2Q13296 93 aa7.14□□□□□ -1.27
TPM1-213ENST00000558400 OR8B8Q15620 311 aa7.14□□□□□ -1.27
TPM1-213ENST00000558400 ZSCAN26Q16670 478 aa7.14□□□□□ -1.27
TPM1-213ENST00000558400 CR1LQ2VPA4 569 aa7.14□□□□□ -1.27
TPM1-213ENST00000558400 ZIK1Q3SY52 487 aaPredicted RBP7.14□□□□□ -1.27
TPM1-213ENST00000558400 SPRNQ5BIV9 151 aa7.14□□□□□ -1.27
TPM1-213ENST00000558400 FAM120AOSQ5T036 256 aa7.14□□□□□ -1.27
TPM1-213ENST00000558400 ZBTB37Q5TC79 503 aa7.14□□□□□ -1.27
TPM1-213ENST00000558400 PLEKHG7Q6ZR37 379 aa7.14□□□□□ -1.27
TPM1-213ENST00000558400 KRT74Q7RTS7 529 aa7.14□□□□□ -1.27
TPM1-213ENST00000558400 BCDIN3DQ7Z5W3 292 aaKnown RBP7.14□□□□□ -1.27
TPM1-213ENST00000558400 MOGAT3Q86VF5 341 aa7.14□□□□□ -1.27
TPM1-213ENST00000558400 GALNT4Q8N4A0 578 aa7.14□□□□□ -1.27
TPM1-213ENST00000558400 OR51G2Q8NGK0 314 aa7.14□□□□□ -1.27
TPM1-213ENST00000558400 MRPL48Q96GC5 212 aaKnown RBP7.14□□□□□ -1.27
TPM1-213ENST00000558400 SIGLEC11Q96RL6 698 aa7.14□□□□□ -1.27
TPM1-213ENST00000558400 MICU1Q9BPX6 476 aa7.14□□□□□ -1.27
TPM1-213ENST00000558400 SOX7Q9BT81 388 aa7.14□□□□□ -1.27
TPM1-213ENST00000558400 ADAT1Q9BUB4 502 aaKnown RBP7.14□□□□□ -1.27
TPM1-213ENST00000558400 PBOV1Q9GZY1 135 aa7.14□□□□□ -1.27
TPM1-213ENST00000558400 MOB1AQ9H8S9 216 aa7.14□□□□□ -1.27
TPM1-213ENST00000558400 RNPEPL1Q9HAU8 725 aa7.14□□□□□ -1.27
TPM1-213ENST00000558400 PATZ1Q9HBE1 687 aaKnown RBP7.14□□□□□ -1.27
TPM1-213ENST00000558400 TMEM165Q9HC07 324 aa7.14□□□□□ -1.27
TPM1-213ENST00000558400 UBAP1Q9NZ09 502 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms